; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0038 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0038
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCCT domain-containing protein
Genome locationMC04:313887..315106
RNA-Seq ExpressionMC04g0038
SyntenyMC04g0038
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589308.1 Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia]1.98e-6564.77Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACD+QLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

XP_022930639.1 zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]1.40e-6565.34Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQSS  QVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

XP_022989100.1 zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima]1.03e-6766.48Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  QN C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+T LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

XP_023530352.1 zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo]3.61e-6866.48Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  Q+ C+GY QP D+   ++ ++      F L+P  +P+YHPLP DNWEIQS  NQVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTK N+       TQLLYN   +  QMKKDEEEW++E+T LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

XP_038888885.1 two-component response regulator-like APRR1 [Benincasa hispida]2.84e-6969.06Show/hide
Query:  AISAAGSQNLC-LGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNF
        A  A GSQN C LG    PD+QF+EF +       FGL+P IKP+YHPLP  NWE QS  NQVP  +    +NMKVGRYSEEVRKERILRYLKKRNQRNF
Subjt:  AISAAGSQNLC-LGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNF

Query:  NKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTT--ESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        NKTIKYACRKTLADRRIRVRGRFARNNEA DQ++NPT  N   DT+  + T+LLYN+HD  +QMK+DEEEWLQEITSLM L
Subjt:  NKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTT--ESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

TrEMBL top hitse value%identityAlignment
A0A0A0K3I7 CCT domain-containing protein4.43e-6065.32Show/hide
Query:  NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH--PLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYA
        N  LG   P    F EF +       FGL+P IKP ++  PLPT NW+ QS  NQV   +    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYA
Subjt:  NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH--PLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYA

Query:  CRKTLADRRIRVRGRFARNNEAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        CRKTLADRRIRVRGRFAR NEA  DQ+LNPT  NN+    + T+LLYNHHD  +QMK DEEEWLQ+I+SLMYL
Subjt:  CRKTLADRRIRVRGRFARNNEAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

A0A5A7U7B4 Zinc finger protein CONSTANS-LIKE 52.61e-5964.37Show/hide
Query:  NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH---PLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKY
        N  LG   P    F+EF + D FG    L+P IKP ++   PLPT N + QS  NQV   +    +NMKVGRYSEEVRK+RILRYLKKRNQRNFNKTIKY
Subjt:  NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH---PLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKY

Query:  ACRKTLADRRIRVRGRFARNNEAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        ACRKTLADRRIRVRGRFARNNEA  DQ++NPT  NN+    + T+LLYNHHD  +QMK+DEEEWLQEI+S+MYL
Subjt:  ACRKTLADRRIRVRGRFARNNEAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

A0A6J1ES17 zinc finger protein CONSTANS-LIKE 5-like6.78e-6665.34Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQSS  QVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

A0A6J1I2H1 uncharacterized protein LOC1114684193.39e-6165.34Show/hide
Query:  GSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKY
        G QN CL      D+ FHEF + D FG    L+P IKP+Y PLP  NWEIQS  N+VP  +    +N+KVGRYSEEVRKERILRYLKKRNQRNF KTIKY
Subjt:  GSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKY

Query:  ACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTT---ESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        ACRKTLADRRIRVRGRFARNNEACDQ+ NP KN    DT       +L+YNH +L +Q+KKDEEEW QE+ SLMYL
Subjt:  ACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTT---ESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

A0A6J1JLF7 zinc finger protein CONSTANS-LIKE 5-like4.98e-6866.48Show/hide
Query:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT
        +AA  QN C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQVP ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKT
Subjt:  SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKT

Query:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL
        IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+T LMYL
Subjt:  IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

SwissProt top hitse value%identityAlignment
O50055 Zinc finger protein CONSTANS-LIKE 13.4e-0437.66Show/hide
Query:  SNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN
        SN + P    D          S   R+ R+LRY +K+  R F KTI+YA RK  A++R R++GRFA+  +  D++ N
Subjt:  SNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN

Q39057 Zinc finger protein CONSTANS3.4e-0444.44Show/hide
Query:  SNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQ
        S  + V + S   R+ R+LRY +KR  R F KTI+YA RK  A+ R RV GRFA+     ++Q
Subjt:  SNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQ

Q940T9 Zinc finger protein CONSTANS-LIKE 46.9e-0540Show/hide
Query:  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE
        PAT   D    +    +   R+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+  +
Subjt:  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE

Q9FHH8 Zinc finger protein CONSTANS-LIKE 52.0e-0440.85Show/hide
Query:  SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE
        ++NN V  +    S      + S   R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  E
Subjt:  SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE

Q9SK53 Zinc finger protein CONSTANS-LIKE 31.5e-0450Show/hide
Query:  RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA
        R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++
Subjt:  RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA

Arabidopsis top hitse value%identityAlignment
AT1G04500.1 CCT motif family protein2.0e-1544.83Show/hide
Query:  IKPIYHPLPTDNWEIQSSNNQ-------------VPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE
        IKPI++P       +    NQ                T  DD +  KVG+ S E RKE+I RY+KKRN+RNF+K IKYACRKTLAD R RVRGRFA+N+E
Subjt:  IKPIYHPLPTDNWEIQSSNNQ-------------VPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE

Query:  ACDQQLNPTKNNNNDD
          +       +++ DD
Subjt:  ACDQQLNPTKNNNNDD

AT1G63820.1 CCT motif family protein5.2e-1659.26Show/hide
Query:  DSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNP------TKNNNNDD
        D  +++VGRYS E RKE+I +Y  KR QRNF KTIKYACRKTLAD R RVRGRFARN+E  +   NP      T+  N+DD
Subjt:  DSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNP------TKNNNNDD

AT2G33350.1 CCT motif family protein2.0e-1557.89Show/hide
Query:  DDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDD
        +DS   KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E  +       ++++D+
Subjt:  DDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDD

AT3G12890.1 activator of spomin::LUC22.7e-2849.02Show/hide
Query:  FHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGR
        FH    Q+ +GF     P IKP++ P   +    QS  N       +   N KVGRYS E RK+RI+RYLKK+NQRNFNKTIKY CRKTLADRR+RVRGR
Subjt:  FHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGR

Query:  FARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITS
        FARNN+ C++Q + +KN+NN    E   +     D  +QM+ D + WL E  S
Subjt:  FARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITS

AT5G41380.1 CCT motif family protein1.6e-1759.76Show/hide
Query:  DNWEIQ--SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD
        +N E+Q  S N+ +P +++    N KVGRYS E RKE+I +Y  KRNQRNF KTIKYACRKTLAD R R+RGRFARN+E  +
Subjt:  DNWEIQ--SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCATTTCAGCGGCCGGGTCTCAAAACCTGTGCCTCGGATACCCACAGCCACCCGATAATCAGTTTCATGAATTTGGAGAGCAGGATGCCTTCGGTTTCGGCTTCGGTTT
GCTTCCACATATCAAACCAATTTATCACCCACTTCCCACCGATAATTGGGAAATTCAAAGCAGCAATAATCAAGTTCCTGCTACTGACCAAGACGACTCAAATAATATGA
AGGTGGGCCGCTACTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGGTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACC
TTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAACAACTTAATCCAACAAAGAATAATAATAATGACGACACTACTGAGTC
TACCCAATTATTATACAACCATCACGATCTCGCTCTTCAGATGAAAAAAGATGAGGAAGAATGGCTACAAGAGATTACAAGTCTAATGTACTTA
mRNA sequenceShow/hide mRNA sequence
GCCATTTCAGCGGCCGGGTCTCAAAACCTGTGCCTCGGATACCCACAGCCACCCGATAATCAGTTTCATGAATTTGGAGAGCAGGATGCCTTCGGTTTCGGCTTCGGTTT
GCTTCCACATATCAAACCAATTTATCACCCACTTCCCACCGATAATTGGGAAATTCAAAGCAGCAATAATCAAGTTCCTGCTACTGACCAAGACGACTCAAATAATATGA
AGGTGGGCCGCTACTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGGTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACC
TTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAACAACTTAATCCAACAAAGAATAATAATAATGACGACACTACTGAGTC
TACCCAATTATTATACAACCATCACGATCTCGCTCTTCAGATGAAAAAAGATGAGGAAGAATGGCTACAAGAGATTACAAGTCTAATGTACTTA
Protein sequenceShow/hide protein sequence
AISAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKT
LADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL