; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0041 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0041
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionKRR1 small subunit processome component
Genome locationMC04:332605..337627
RNA-Seq ExpressionMC04g0041
SyntenyMC04g0041
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR024166 - Ribosomal RNA assembly KRR1
IPR036612 - K Homology domain, type 1 superfamily
IPR041174 - Krr1, KH1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012057.1 mis3 [Cucurbita argyrosperma subsp. argyrosperma]3.02e-21584.84Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALANENWDRFLPKFK+K VKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_022148021.1 KRR1 small subunit processome component [Momordica charantia]2.85e-23492.04Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYR     +KYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        DCMLNKMHP     ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

XP_022952886.1 KRR1 small subunit processome component homolog [Cucurbita moschata]6.09e-21584.84Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFD SWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_022969421.1 KRR1 small subunit processome component homolog [Cucurbita maxima]4.99e-21484.57Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALA+ENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREA+FVPPKE PKQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIA SS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_023511730.1 KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]1.50e-21585.11Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRW V+KFDPSWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

TrEMBL top hitse value%identityAlignment
A0A0A0K7G6 KRR1 small subunit processome component3.19e-20580.9Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        +Q Q K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNE GMLEVSSFSTLFP YR     +KYL++ WP+VKSALKEF +  ELNL+EGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMM+KELANDPALANENWDRFLPKFK+KTVKQKK KSK KK YTPFPPPQQPS+IDIQLETGEYFL++KKKSAKKWQ+KQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KTA+NKRKREAAFVPPKE PKQDTK DGD NDIA MAK+LKEKAKA GKRKAAETIN E+YIASSS++P FKK+SKT
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A5D3CP78 KRR1 small subunit processome component5.52e-20682.01Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNE GMLEVSSFSTLFP YR     +KYL++ WP+VKSALKEF +  ELNL+EGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK KK YTPFPPPQQPS+IDIQLETGEYFL++KKKSAKKWQ+KQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQ-DTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KTAENKRKREAAFVPPKE PKQ DT+ DGD NDIA MAKALKEKAKA GKRKAAETIN E+YIASSS+QP FKK+SKT
Subjt:  KTAENKRKREAAFVPPKEPPKQ-DTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A6J1D441 KRR1 small subunit processome component1.38e-23492.04Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYR     +KYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        DCMLNKMHP     ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A6J1GLG6 KRR1 small subunit processome component2.95e-21584.84Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFD SWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

A0A6J1HWB5 KRR1 small subunit processome component2.42e-21484.57Show/hide
Query:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT
        EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YR     +KYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT
Subjt:  EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        +DPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK                   ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKK-------------------ALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
        +CM+NKMHP     ILMMKKELANDPALA+ENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAE
Subjt:  DCMLNKMHP-----ILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        KTAENKRKREA+FVPPKE PKQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIA SS+Q HFKK+SK
Subjt:  KTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

SwissProt top hitse value%identityAlignment
B3LU25 KRR1 small subunit processome component1.4e-7854.98Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+Y     R+ YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KAR
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR

Query:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI
        DLIKLL+RSVP PQA+KIL D+M CD+IKIGN              LVG      KALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HPI
Subjt:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI

Query:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR
             LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + 
Subjt:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR

Query:  KREAAFVPPKE
        +R   F+ P+E
Subjt:  KREAAFVPPKE

B5VEQ2 KRR1 small subunit processome component1.4e-7854.98Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+Y     R+ YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KAR
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR

Query:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI
        DLIKLL+RSVP PQA+KIL D+M CD+IKIGN              LVG      KALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HPI
Subjt:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI

Query:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR
             LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + 
Subjt:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR

Query:  KREAAFVPPKE
        +R   F+ P+E
Subjt:  KREAAFVPPKE

C8Z430 KRR1 small subunit processome component1.4e-7854.98Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+Y     R+ YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KAR
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR

Query:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI
        DLIKLL+RSVP PQA+KIL D+M CD+IKIGN              LVG      KALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HPI
Subjt:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI

Query:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR
             LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + 
Subjt:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR

Query:  KREAAFVPPKE
        +R   F+ P+E
Subjt:  KREAAFVPPKE

O74777 KRR1 small subunit processome component homolog8.1e-8255.45Show/hide
Query:  KHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARD
        ++ + KPWD D +ID WK++ F    ++   LE SSF+TLFP+Y     R+KYL+E WP V  AL +F + C L+LVEGSMTV TTRKT DPY I+ ARD
Subjt:  KHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARD

Query:  LIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI-
        LIKLL+RSVP PQA+KI+ D + CDIIKIGN              L+G      KALE+LT CYILVQG TVA MG +KGLK+VRRIVEDCM N +HPI 
Subjt:  LIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI-

Query:  ----LMMKKELANDPALANENWDRFLPKFKRKTV-KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKRE
            LM+K+ELA DP LANE+WDRFLP+FK++ V ++K AK +E K YTPFPP Q PSK+D+++E+GEYFL  ++K  KK  EK+E+Q EK  E +++R 
Subjt:  ----LMMKKELANDPALANENWDRFLPKFKRKTV-KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKRE

Query:  AAFVPPKEPPKQ
         AF+PP+E  K+
Subjt:  AAFVPPKEPPKQ

P25586 KRR1 small subunit processome component1.4e-7854.98Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+Y     R+ YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KAR
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR

Query:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI
        DLIKLL+RSVP PQA+KIL D+M CD+IKIGN              LVG      KALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HPI
Subjt:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGN--------------LVGK-----KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPI

Query:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR
             LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + 
Subjt:  -----LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKR

Query:  KREAAFVPPKE
        +R   F+ P+E
Subjt:  KREAAFVPPKE

Arabidopsis top hitse value%identityAlignment
AT5G08420.1 RNA-binding KH domain-containing protein5.1e-13268.09Show/hide
Query:  KKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYI
        ++K KGKH+KPKPWD+DPNIDRW ++KFDP+WN  GM E S+FSTLFP+Y     R+KYLQE WP V+SALKE+ VAC+LNLVEGSMTVSTTRKTRDPYI
Subjt:  KKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYI

Query:  IVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGK-------------------KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLN
        IVKARDLIKLLSRSVPAPQAIKIL+DE+QCDIIKIGNLV                     KALEILT CYILVQG+TVAAMG FKGLKQ+RRIVEDC+ N
Subjt:  IVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGK-------------------KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLN

Query:  KMHPI-----LMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAEN
         MHP+     LMMKKEL  DPALANE+WDRFLP F++K VKQKK KSKEKKPYTPFPPPQ PSKID+QLE+GEYF+SDKKKS KKWQEKQEKQ+EK+ EN
Subjt:  KMHPI-----LMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAEN

Query:  KRKREAAFVPPKEPPKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINAESYIAS-SSNQPHFKKKSK
        KRKR+A+F+PP+EP   ++   KS+   NDI  +  +LK K K L K +K  E +NAE YIA  SS+     KKSK
Subjt:  KRKREAAFVPPKEPPKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINAESYIAS-SSNQPHFKKKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCAACAGCAAGGGAAAAAGAAGCATAAGGGCAAGCACGACAAGCCGAAGCCATGGGATGAAGATCCTAATATTGACCGCTGGAAAGTCGACAAGTTTGATCCCTCCTG
GAATGAAGGTGGCATGCTCGAAGTCAGCTCCTTCTCTACTCTGTTTCCCGAGTACAGAGGCAAGGAATTTCGACAAAAGTATTTGCAAGAAGCATGGCCGATTGTTAAGT
CTGCGTTGAAAGAGTTTCGTGTTGCCTGTGAGCTGAATCTGGTTGAAGGATCAATGACGGTTTCAACAACCAGGAAGACTAGGGATCCATATATTATTGTCAAGGCAAGG
GATCTTATCAAACTCTTGTCAAGAAGCGTACCTGCTCCTCAGGCAATTAAAATACTGGACGATGAAATGCAATGTGATATCATTAAGATTGGGAATTTGGTAGGCAAGAA
GGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTCAGGAGGATAGTGGAAGACTGTA
TGCTGAATAAAATGCATCCTATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTCGCAAATGAAAATTGGGATAGGTTTCTTCCAAAATTCAAGAGGAAAACT
GTTAAACAAAAGAAGGCCAAGAGTAAAGAGAAGAAGCCGTATACACCTTTTCCTCCTCCTCAGCAACCTAGCAAGATTGATATACAATTGGAAACTGGAGAATACTTTTT
AAGTGACAAAAAGAAGTCAGCAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAGAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGG
AGCCTCCGAAGCAGGATACCAAATCTGATGGGGATAACAACGATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCGAAGGCATTAGGGAAACGAAAAGCTGCGGAA
ACTATCAATGCGGAATCTTATATTGCCTCATCTAGCAATCAGCCGCATTTCAAAAAGAAATCCAAGACTTAA
mRNA sequenceShow/hide mRNA sequence
GAGCAACAGCAAGGGAAAAAGAAGCATAAGGGCAAGCACGACAAGCCGAAGCCATGGGATGAAGATCCTAATATTGACCGCTGGAAAGTCGACAAGTTTGATCCCTCCTG
GAATGAAGGTGGCATGCTCGAAGTCAGCTCCTTCTCTACTCTGTTTCCCGAGTACAGAGGCAAGGAATTTCGACAAAAGTATTTGCAAGAAGCATGGCCGATTGTTAAGT
CTGCGTTGAAAGAGTTTCGTGTTGCCTGTGAGCTGAATCTGGTTGAAGGATCAATGACGGTTTCAACAACCAGGAAGACTAGGGATCCATATATTATTGTCAAGGCAAGG
GATCTTATCAAACTCTTGTCAAGAAGCGTACCTGCTCCTCAGGCAATTAAAATACTGGACGATGAAATGCAATGTGATATCATTAAGATTGGGAATTTGGTAGGCAAGAA
GGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTCAGGAGGATAGTGGAAGACTGTA
TGCTGAATAAAATGCATCCTATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTCGCAAATGAAAATTGGGATAGGTTTCTTCCAAAATTCAAGAGGAAAACT
GTTAAACAAAAGAAGGCCAAGAGTAAAGAGAAGAAGCCGTATACACCTTTTCCTCCTCCTCAGCAACCTAGCAAGATTGATATACAATTGGAAACTGGAGAATACTTTTT
AAGTGACAAAAAGAAGTCAGCAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAGAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGG
AGCCTCCGAAGCAGGATACCAAATCTGATGGGGATAACAACGATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCGAAGGCATTAGGGAAACGAAAAGCTGCGGAA
ACTATCAATGCGGAATCTTATATTGCCTCATCTAGCAATCAGCCGCATTTCAAAAAGAAATCCAAGACTTAATCGATCGTAGAAGTTAGCAAGTACATTGTGAGGGGCAC
TTCATCCCTTGTGGACGGGAGCCCCTAATTTTTCTAAAATTACGAAAGCTTCAAGTTTTGTGTATGACTTCATATTTGTTAGATCTCGGATCACAGATTAGTATTGATGA
GAAAAGCTGGAGCCCTATCATTTACCGTGTCTCGTCCTTTTTCCAGTTTTCTTTTGATTTTCCTTTTGTAGGTTTCTGAGTTCATTGCTAATTTGCTAGACAGCTCTCTT
CGCCCTCTAAATGAGATGAGCCATGAACTTTAGGCAGGATATGAACTTGTCACTTGAGTTCTGTTCTCCGATACTATAAAATGATGATTCAACGGTGTAGTCTCTAAGGC
Protein sequenceShow/hide protein sequence
EQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYRGKEFRQKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPILMMKKELANDPALANENWDRFLPKFKRKT
VKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAE
TINAESYIASSSNQPHFKKKSKT