; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0049 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0049
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationMC04:398169..402248
RNA-Seq ExpressionMC04g0049
SyntenyMC04g0049
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012049.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.32e-28558.73Show/hide
Query:  GEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVTAIID----
        G++    KLFD MP RNPISWNSMIGGYVRNGMFKEALKLFVKMQEE I+PSEF+MVSLLNAS  IGAL      +EY++K NLEL+  V TAIID    
Subjt:  GEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVTAIID----

Query:  -------------------------------------------MYCKCGSIVNALQVFEKMPS------RGLSSW----NSMIFGLAVNGCENEAILLFR
                                                   M+ + G +  A Q+ + MP       RG++      N+ +   A        + L+R
Subjt:  -------------------------------------------MYCKCGSIVNALQVFEKMPS------RGLSSW----NSMIFGLAVNGCENEAILLFR

Query:  MLE-------------SSSLEPDSVTME---ERVSMRMKNVEKEPG----GSLIEVDGEV--------------HEFIAGG------GRLHPKAQEIYIV
        M               + ++ PD +  +    R +      +  P       L+ V   +                F+A         R  P  Q   + 
Subjt:  MLE-------------SSSLEPDSVTME---ERVSMRMKNVEKEPG----GSLIEVDGEV--------------HEFIAGG------GRLHPKAQEIYIV

Query:  LDQLGERCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPS
                T      ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+
Subjt:  LDQLGERCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPS

Query:  IFEEFLPGGIGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGS
        IFEEFLPGGIGIQPHVRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG 
Subjt:  IFEEFLPGGIGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGS

Query:  GDTRALELVCWNNELATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIA
        G  +ALELVCW+NELATSVLEKMAAK + G  SKG+ ++FPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL P+SDESDKW+VAILHE LHML+ 
Subjt:  GDTRALELVCWNNELATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIA

Query:  KKIEKETILSIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDD
        KK EKET+L IGEYFGLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   T QQK+E+KE SDD
Subjt:  KKIEKETILSIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDD

Query:  ATRKENEAELLDSSDEEAEDD-------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRT
         + K+NEAEL +S DE+ +++             SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR N ++ RPSRD   KRERSN SK   VRT
Subjt:  ATRKENEAELLDSSDEEAEDD-------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRT

Query:  KV
        KV
Subjt:  KV

XP_022147962.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]0.0100Show/hide
Query:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG
        MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG
Subjt:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG

Query:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
        IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
Subjt:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV

Query:  CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS
        CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS
Subjt:  CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS

Query:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL
        IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL
Subjt:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL

Query:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV
        LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV
Subjt:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV

XP_022952527.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]1.03e-25678.67Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGMPI+FPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL P+SDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   T QQK+E+KE SDD + K+NEAEL +S D
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD

Query:  EEAEDD---------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
        E+ +++         SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR N ++ RPSRD   KRERSN SK   VRTKV
Subjt:  EEAEDD---------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

XP_022969363.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 [Cucurbita maxima]3.91e-25478.88Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+ E   T QQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS

Query:  DEEAEDD--------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
          E ED+        SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR NS++ RPSRD   KRERSN SK Y VRTKV
Subjt:  DEEAEDD--------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

XP_023554109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]1.84e-25577.17Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCW+NEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGM ++FPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL P+SDESDKW+VAILHE LHMLI KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKED KTT+E   T QQK+E+KE SDD + K+NEAEL +SSD
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD

Query:  EEA------------EDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD-----------VKRERSNNSKGYQVRTKV
        +E             ED SSN N +ADRKE  G  +R+VD +EN  R+R+RSSKR NS++ RPSRD            KRERSN SK Y VRTKV
Subjt:  EEA------------EDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD-----------VKRERSNNSKGYQVRTKV

TrEMBL top hitse value%identityAlignment
A0A6J1D3S2 protein ROOT PRIMORDIUM DEFECTIVE 10.0100Show/hide
Query:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG
        MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG
Subjt:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG

Query:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
        IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
Subjt:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV

Query:  CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS
        CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS
Subjt:  CWNNELATSVLEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILS

Query:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL
        IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL
Subjt:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAEL

Query:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV
        LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV
Subjt:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV

A0A6J1GKN4 protein ROOT PRIMORDIUM DEFECTIVE 14.98e-25778.67Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGMPI+FPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL P+SDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   T QQK+E+KE SDD + K+NEAEL +S D
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSD

Query:  EEAEDD---------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
        E+ +++         SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR N ++ RPSRD   KRERSN SK   VRTKV
Subjt:  EEAEDD---------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

A0A6J1HW55 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X38.88e-25478.23Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+ E   T QQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS

Query:  DEEAEDD------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
          E ED+            SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR NS++ RPSRD   KRERSN SK Y VRTKV
Subjt:  DEEAEDD------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

A0A6J1HXK3 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X29.00e-25377.28Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+ E   T QQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS

Query:  DEEAEDD------------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
          E ED+                  SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR NS++ RPSRD   KRERSN SK Y VRTKV
Subjt:  DEEAEDD------------------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

A0A6J1I0R6 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X41.89e-25478.88Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF
        ATSVLEKMAAK + G  SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAETG-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+ E   T QQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTT-EQGGTCQQKKEEKERSDDATRKENEAELLDSS

Query:  DEEAEDD--------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV
          E ED+        SSN N +ADRKE  G  +RHVD +EN  R+R+RSSKR NS++ RPSRD   KRERSN SK Y VRTKV
Subjt:  DEEAEDD--------SSNLNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRD--VKRERSNNSKGYQVRTKV

SwissProt top hitse value%identityAlignment
Q38959 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic2.6e-3944.71Show/hide
Query:  VAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELN
        V+W +M+ G+    ++  +  +F+ MP RN +SW +MI  YV+N    EA +LF +MQ + +KP+EFT+V+LL AS  +G+L  G W+H+Y  KN   L+
Subjt:  VAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELN

Query:  PIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLF-RMLESSSLEPDSVT
          + TA+IDMY KCGS+ +A +VF+ M  + L++WNSMI  L V+GC  EA+ LF  M E +S+EPD++T
Subjt:  PIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLF-RMLESSSLEPDSVT

Q9FG16 Pentatricopeptide repeat-containing protein At5g065406.4e-3836.32Show/hide
Query:  DAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE
        D V+W SM+ G  KCG +  +R++FD MP RN  +W+ MI GY +N  F++A+ LF  M+ E +  +E  MVS++++ AH+GAL  GE  +EY+ K+++ 
Subjt:  DAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE

Query:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVTMEERVSMRMKNVEKEPGGSLIEVDGEVHE
        +N I+ TA++DM+ +CG I  A+ VFE +P     SW+S+I GLAV+G  ++A+  F  + S    P  VT    +S           G L+E   E++E
Subjt:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVTMEERVSMRMKNVEKEPGGSLIEVDGEVHE

Query:  FIAGGGRLHPKAQEIYIVLDQLG
         +     + P+ +    ++D LG
Subjt:  FIAGGGRLHPKAQEIYIVLDQLG

Q9LSB8 Putative pentatricopeptide repeat-containing protein At3g159306.4e-3844.44Show/hide
Query:  DAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE
        D ++W S++ G  + G +  +R  FD MP R+ ISW  MI GY+R G F E+L++F +MQ   + P EFTMVS+L A AH+G+L  GEWI  YI+KN ++
Subjt:  DAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE

Query:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT
         + +V  A+IDMY KCG    A +VF  M  R   +W +M+ GLA NG   EAI +F  ++  S++PD +T
Subjt:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic1.0e-5965.12Show/hide
Query:  FDAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL
        FD VAWNSMIMG AKCG I +++ LFD MP+RN +SWNSMI G+VRNG FK+AL +F +MQE+ +KP  FTMVSLLNA A++GA  QG WIHEYI +N  
Subjt:  FDAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL

Query:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT
        ELN IVVTA+IDMYCKCG I   L VFE  P + LS WNSMI GLA NG E  A+ LF  LE S LEPDSV+
Subjt:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial4.0e-5637.03Show/hide
Query:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA
        RTYVD  +KW RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     + T+    +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA

Query:  EEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA
        +E++ YQ         D+L KL+++S+ + +PLSI+  +KW LGLP DY+Q     FPD   +     F       + L +     +   SVL+K A K 
Subjt:  EEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA

Query:  ETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHH
          G      I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L PSSD ++K  V  LHELL + +    E++ +L + ++FGL  +  +A   H
Subjt:  ETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLM
        P IFYLS KN T T +L+E Y+  + +E  P++ +R KY+ LM
Subjt:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLM

Arabidopsis top hitse value%identityAlignment
AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein1.7e-12654.14Show/hide
Query:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEEQLS
        V+ T K+VRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +++ LR+P RPI+ IR +PS+F+EFLPGGIGI PH+ LT ++L  DA+EQL 
Subjt:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEEQLS

Query:  YQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAETG-V
        Y  E  +Q  AD+L+KLLMI+R +KIPL I+D LKWDLGLPKDYV+++VP+FPDYF+V+        SG+   LELVCW+NE A SVLEK A     G  
Subjt:  YQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAETG-V

Query:  SKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHHPGIF
        +KG  I+FPMKFSNGF +DKK KKW+D+WQKLPYISPYENA HLS +SDESDKWA A+LHE++++ ++KK+EK+ IL +GE+ GLRSRFKR L +HPGIF
Subjt:  SKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHHPGIF

Query:  YLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSDEEAEDDSSNLNARADRK
        YLSSK  T+TVVL++GYKRG +IE++ L+  RN+Y+ LMNTVK+D+K  +       + K E E  D   + EN+    D S  + EDD        D  
Subjt:  YLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSDEEAEDDSSNLNARADRK

Query:  EAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSK
        +        VD  +++ R R  SS R    S   S    + +S  SK
Subjt:  EAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSK

AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein2.9e-5737.03Show/hide
Query:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA
        RTYVD  +KW RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     + T+    +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA

Query:  EEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA
        +E++ YQ         D+L KL+++S+ + +PLSI+  +KW LGLP DY+Q     FPD   +     F       + L +     +   SVL+K A K 
Subjt:  EEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA

Query:  ETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHH
          G      I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L PSSD ++K  V  LHELL + +    E++ +L + ++FGL  +  +A   H
Subjt:  ETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLM
        P IFYLS KN T T +L+E Y+  + +E  P++ +R KY+ LM
Subjt:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLM

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.3e-6165.12Show/hide
Query:  FDAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL
        FD VAWNSMIMG AKCG I +++ LFD MP+RN +SWNSMI G+VRNG FK+AL +F +MQE+ +KP  FTMVSLLNA A++GA  QG WIHEYI +N  
Subjt:  FDAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL

Query:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT
        ELN IVVTA+IDMYCKCG I   L VFE  P + LS WNSMI GLA NG E  A+ LF  LE S LEPDSV+
Subjt:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVT

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.0e-0749.28Show/hide
Query:  ILLFRMLESSSLEPDSVTMEERVSMRMKNVEKEPGGSLIEVDGEVHEFIAGGGRLHPKAQEIYIVLDQL
        +LL     S  L  ++V  E+R+ M+ + +EKE G S IEVD EVHEFI+ GG  HPK+ EIY +LD L
Subjt:  ILLFRMLESSSLEPDSVTMEERVSMRMKNVEKEPGGSLIEVDGEVHEFIAGGGRLHPKAQEIYIVLDQL

AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein1.4e-8043.44Show/hide
Query:  RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEE
        RT+V+  +KWV D  LD AV+REKNL  V+++KD I S PSKS+P+S ++  + ++ +        +KYPS+F  F P       HVRLT Q L L  EE
Subjt:  RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEE

Query:  QLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAE-
        +  +     R     +L K LM++    +PL ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   T AL +    N L  S +E+  A  + 
Subjt:  QLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAE-

Query:  TGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHHP
        + V KG+ I + M F  G+E+ K+ K WV++WQ LPYISPYENA HL   SD+++KWAVA+LHELL +L++KK E + ++ +GEY G   RFK+AL+HHP
Subjt:  TGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHHP

Query:  GIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN
        GIFY+S K  T TVVL+E Y +  ++E  PL+ IR++Y++LM+
Subjt:  GIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN

AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein3.7e-5737.97Show/hide
Query:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--TRPIDLIRKYPSIFEEFL---PGGIGIQPHVRLTSQVLELDA
        V+  +KWV+DR LD  V REK+L  V N+   I + P   +P+  +   R  L +P   +    IR+YP+IF E       G  + P   LT + ++L  
Subjt:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--TRPIDLIRKYPSIFEEFL---PGGIGIQPHVRLTSQVLELDA

Query:  EE-QLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAK
        EE  +S   E   +    +L KLLM++    + L  ID L+WDLGLP DY  S++   PD F +V        S D   L+L+ W+  LA S   +M  +
Subjt:  EE-QLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAK

Query:  AETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLH
         + G  + M  +FP+KF+ GF + +K  +W+ EWQ+LPY SPY +ASHL P +D S+K  V + HELLH+ I KK E++ + ++ + F L  +F +    
Subjt:  AETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLH

Query:  HPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN
        HPGIFY+S K  T TV+L+E Y R  +IE  PL+ +R K+ ++MN
Subjt:  HPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGATGCTGTTGCGTGGAATTCCATGATTATGGGTGTGGCTAAATGTGGGGAAATTGGGGAGTCGAGGAAGCTGTTCGATACAATGCCCGAAAGAAACCCAAT
CTCATGGAATTCCATGATTGGTGGGTATGTTAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAAGAGAAAATCAAGCCTAGTGAGTTTACAA
TGGTGAGCTTGTTAAACGCCTCAGCTCACATTGGAGCACTCAGGCAAGGGGAATGGATTCATGAGTACATAGAGAAGAACAATCTAGAGTTGAATCCCATTGTAGTTACA
GCAATCATAGACATGTACTGCAAATGTGGTAGCATAGTTAATGCCCTTCAAGTGTTTGAGAAAATGCCCAGCAGAGGATTATCTAGTTGGAACTCCATGATCTTCGGCCT
GGCTGTGAATGGCTGCGAAAATGAAGCAATTTTGTTATTCAGAATGCTGGAATCTTCGAGTCTTGAACCAGATTCTGTTACAATGGAGGAAAGGGTTTCAATGAGGATGA
AGAATGTGGAGAAAGAACCAGGGGGAAGCCTGATTGAAGTTGATGGTGAAGTTCATGAGTTTATAGCTGGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATTTACATT
GTATTGGACCAATTGGGAGAGAGGTGTACAATGTTTTTGTTATCGCGCAATCAATCCCAACAGCAACACCACCTTTTCCATTTATACATTCGAACGTATGTAGACGGCAC
CATAAAATGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTTCTGCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTG
TCCCAGTTTCCATCATAACGCAGAAAAGGGAAGTTCTAAGAATTCCAACGCGCCCCATTGATTTGATCAGAAAATATCCCTCTATTTTCGAAGAATTTCTCCCTGGAGGG
ATTGGCATTCAACCTCATGTTCGGCTAACCTCTCAAGTCCTTGAGCTTGATGCCGAAGAACAGTTAAGCTATCAAGGCGAAAATTGTAGACAACGAGCTGCAGATCAACT
TGTGAAGCTCTTAATGATTTCAAGATTCCACAAAATACCTTTAAGTATCATTGATCAATTGAAATGGGACCTGGGTCTTCCCAAGGATTACGTCCAAAGTATAGTTCCTG
ATTTTCCAGATTACTTCAAGGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGAGATACGCGAGCGTTGGAATTGGTATGTTGGAACAATGAATTGGCCACCTCAGTT
TTGGAGAAGATGGCTGCGAAGGCAGAAACCGGCGTTTCGAAGGGAATGCCTATTAGTTTTCCTATGAAATTCTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTG
GGTGGATGAATGGCAAAAGCTACCTTACATTTCCCCTTATGAAAATGCATCACATCTCTCTCCGAGCAGCGATGAATCGGACAAGTGGGCGGTTGCGATCTTACATGAGC
TTCTTCATATGCTCATTGCAAAGAAGATAGAGAAGGAAACTATACTGTCCATTGGCGAATATTTTGGCCTTCGGTCGAGGTTCAAGAGAGCATTGCTTCACCATCCAGGG
ATATTCTACCTATCGAGTAAGAATGGAACATACACGGTTGTCTTAAAAGAGGGGTATAAAAGGGGTTCCGTAATTGAGAACAGCCCTTTGATAAACATTAGAAATAAGTA
CCTTCACCTTATGAATACAGTTAAGGAAGACAGTAAAACAACAACCGAACAAGGCGGTACTTGTCAACAGAAGAAAGAGGAGAAAGAACGGTCAGATGATGCTACTCGAA
AAGAGAACGAAGCTGAACTCCTCGACTCTTCGGACGAAGAAGCTGAAGACGATAGTAGTAATCTCAATGCCCGTGCTGATCGGAAAGAGGCTGCTGGTGGACGTAGGAGA
CATGTTGATTTCCAAGAAAATGTTGGTAGAAACAGAGTGAGATCATCGAAGAGAATGAACTCGACTTCGGGAAGGCCTTCAAGGGATGTTAAAAGAGAGAGGTCAAATAA
CAGTAAGGGATACCAGGTGAGGACGAAGGTT
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGATGCTGTTGCGTGGAATTCCATGATTATGGGTGTGGCTAAATGTGGGGAAATTGGGGAGTCGAGGAAGCTGTTCGATACAATGCCCGAAAGAAACCCAAT
CTCATGGAATTCCATGATTGGTGGGTATGTTAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAAGAGAAAATCAAGCCTAGTGAGTTTACAA
TGGTGAGCTTGTTAAACGCCTCAGCTCACATTGGAGCACTCAGGCAAGGGGAATGGATTCATGAGTACATAGAGAAGAACAATCTAGAGTTGAATCCCATTGTAGTTACA
GCAATCATAGACATGTACTGCAAATGTGGTAGCATAGTTAATGCCCTTCAAGTGTTTGAGAAAATGCCCAGCAGAGGATTATCTAGTTGGAACTCCATGATCTTCGGCCT
GGCTGTGAATGGCTGCGAAAATGAAGCAATTTTGTTATTCAGAATGCTGGAATCTTCGAGTCTTGAACCAGATTCTGTTACAATGGAGGAAAGGGTTTCAATGAGGATGA
AGAATGTGGAGAAAGAACCAGGGGGAAGCCTGATTGAAGTTGATGGTGAAGTTCATGAGTTTATAGCTGGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATTTACATT
GTATTGGACCAATTGGGAGAGAGGTGTACAATGTTTTTGTTATCGCGCAATCAATCCCAACAGCAACACCACCTTTTCCATTTATACATTCGAACGTATGTAGACGGCAC
CATAAAATGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTTCTGCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTG
TCCCAGTTTCCATCATAACGCAGAAAAGGGAAGTTCTAAGAATTCCAACGCGCCCCATTGATTTGATCAGAAAATATCCCTCTATTTTCGAAGAATTTCTCCCTGGAGGG
ATTGGCATTCAACCTCATGTTCGGCTAACCTCTCAAGTCCTTGAGCTTGATGCCGAAGAACAGTTAAGCTATCAAGGCGAAAATTGTAGACAACGAGCTGCAGATCAACT
TGTGAAGCTCTTAATGATTTCAAGATTCCACAAAATACCTTTAAGTATCATTGATCAATTGAAATGGGACCTGGGTCTTCCCAAGGATTACGTCCAAAGTATAGTTCCTG
ATTTTCCAGATTACTTCAAGGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGAGATACGCGAGCGTTGGAATTGGTATGTTGGAACAATGAATTGGCCACCTCAGTT
TTGGAGAAGATGGCTGCGAAGGCAGAAACCGGCGTTTCGAAGGGAATGCCTATTAGTTTTCCTATGAAATTCTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTG
GGTGGATGAATGGCAAAAGCTACCTTACATTTCCCCTTATGAAAATGCATCACATCTCTCTCCGAGCAGCGATGAATCGGACAAGTGGGCGGTTGCGATCTTACATGAGC
TTCTTCATATGCTCATTGCAAAGAAGATAGAGAAGGAAACTATACTGTCCATTGGCGAATATTTTGGCCTTCGGTCGAGGTTCAAGAGAGCATTGCTTCACCATCCAGGG
ATATTCTACCTATCGAGTAAGAATGGAACATACACGGTTGTCTTAAAAGAGGGGTATAAAAGGGGTTCCGTAATTGAGAACAGCCCTTTGATAAACATTAGAAATAAGTA
CCTTCACCTTATGAATACAGTTAAGGAAGACAGTAAAACAACAACCGAACAAGGCGGTACTTGTCAACAGAAGAAAGAGGAGAAAGAACGGTCAGATGATGCTACTCGAA
AAGAGAACGAAGCTGAACTCCTCGACTCTTCGGACGAAGAAGCTGAAGACGATAGTAGTAATCTCAATGCCCGTGCTGATCGGAAAGAGGCTGCTGGTGGACGTAGGAGA
CATGTTGATTTCCAAGAAAATGTTGGTAGAAACAGAGTGAGATCATCGAAGAGAATGAACTCGACTTCGGGAAGGCCTTCAAGGGATGTTAAAAGAGAGAGGTCAAATAA
CAGTAAGGGATACCAGGTGAGGACGAAGGTT
Protein sequenceShow/hide protein sequence
MEFDAVAWNSMIMGVAKCGEIGESRKLFDTMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVT
AIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSVTMEERVSMRMKNVEKEPGGSLIEVDGEVHEFIAGGGRLHPKAQEIYI
VLDQLGERCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGG
IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSV
LEKMAAKAETGVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILSIGEYFGLRSRFKRALLHHPG
IFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSDEEAEDDSSNLNARADRKEAAGGRRR
HVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVRTKV