; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0090 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0090
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationMC04:660590..661032
RNA-Seq ExpressionMC04g0090
SyntenyMC04g0090
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148070.1 small ubiquitin-related modifier 1-like [Momordica charantia]4.28e-60100Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]1.06e-3767.39Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]8.47e-3766.3Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        E  TRKPE+EP  +YVN+KVNGQDGSEVYFR+ K+TQL +LM +YC+RQ  +   +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]1.63e-4274.73Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        EE+ RKPES+PD EYVN+KVNGQDGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLLDGH I G QT E+LE++DGDEIDAM HHGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

XP_038888535.1 small ubiquitin-related modifier 1-like isoform X2 [Benincasa hispida]6.27e-3770.33Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        EE+ RKPES+PD EYVN+K    DGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLLDGH I G QT E+LE++DGDEIDAM HHGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 12.30e-3566.3Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   +AFL+DGH I G QT E+L L+DGDEIDAM HH GGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

A0A6G1DVS4 Small ubiquitin-related modifier1.90e-2854.44Show/hide
Query:  ESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        E  +KP  E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++LE++DGDEIDAM H  GG
Subjt:  ESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

A0A6J1D1W9 small ubiquitin-related modifier 1-like2.07e-60100Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

A0A6J1GLF8 Small ubiquitin-related modifier8.52e-3768.54Show/hide
Query:  RKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGD+IDAM HHGGGG
Subjt:  RKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X25.15e-3867.39Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt33.4e-1643.18Show/hide
Query:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        T + + +P  E++N+KV GQD +EV+F+++K T+  KLM  YC RQG+    + FL+DG  I  +QTP +L+++DGD+I+A+    GG
Subjt:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

P55852 Small ubiquitin-related modifier 13.0e-2050.55Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

P55857 Small ubiquitin-related modifier 17.1e-2252.75Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        EE  +    E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++LE++DGDEIDAM H  GG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q7ZTK7 Small ubiquitin-related modifier 2-A2.5e-1446.15Show/hide
Query:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        +++N+KV GQDGS V F+++++T L KLM +YC+RQG   R + F  DG  I    TP QLE++D D ID      GG
Subjt:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q9FLP6 Small ubiquitin-related modifier 21.2e-2153.93Show/hide
Query:  PESEPDPE---YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        PE +  P+   ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Subjt:  PESEPDPE---YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 12.1e-2150.55Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

AT5G55160.1 small ubiquitin-like modifier 28.6e-2353.93Show/hide
Query:  PESEPDPE---YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        PE +  P+   ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Subjt:  PESEPDPE---YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

AT5G55160.2 small ubiquitin-like modifier 25.2e-2047.06Show/hide
Query:  PESEPDPE---YVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGG
        PE +  P+   ++N+KV GQ             DG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  G
Subjt:  PESEPDPE---YVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGG

Query:  GG
        GG
Subjt:  GG

AT5G55170.1 small ubiquitin-like modifier 33.6e-1343.02Show/hide
Query:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        KP  +    +V +KV  QDG EV F+ +K   LKKLM  YC R+G      AF+ +G  I G +TP++L+++DGD IDA     GG
Subjt:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

AT5G55856.1 Ubiquitin-like superfamily protein6.9e-1240.26Show/hide
Query:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        ++ +KV  QD   VYFR+++  +L+K+M +Y  + G +   + FL DG+ I  NQTP +L L+D DEI+A     GG
Subjt:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCGAAAGAAAACCCA
ACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGACCCCGGAGCAGC
TGGAGCTGAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGC
mRNA sequenceShow/hide mRNA sequence
GAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCGAAAGAAAACCCA
ACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGACCCCGGAGCAGC
TGGAGCTGAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGC
Protein sequenceShow/hide protein sequence
EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG