; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0240 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0240
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationMC04:1869072..1871207
RNA-Seq ExpressionMC04g0240
SyntenyMC04g0240
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144523.1 uncharacterized protein At4g28440 [Cucumis sativus]3.46e-9193.79Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_008455497.1 PREDICTED: uncharacterized protein At4g28440 [Cucumis melo]4.20e-9295.17Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022136009.1 uncharacterized protein At4g28440-like [Momordica charantia]9.19e-96100Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022988994.1 uncharacterized protein At4g28440-like [Cucurbita maxima]2.00e-9094.48Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVFIKVE+LKPG+SGHTL VKVVSSKNVK+VNKGGRSAM TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_038887250.1 uncharacterized protein At4g28440-like [Benincasa hispida]1.03e-9295.86Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

TrEMBL top hitse value%identityAlignment
A0A0A0K1C6 Uncharacterized protein1.67e-9193.79Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A1S3C119 uncharacterized protein At4g284402.04e-9295.17Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A5A7UWS4 Uncharacterized protein2.04e-9295.17Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1C327 uncharacterized protein At4g28440-like4.45e-96100Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1JN47 uncharacterized protein At4g28440-like9.68e-9194.48Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVFIKVE+LKPG+SGHTL VKVVSSKNVK+VNKGGRSAM TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284401.0e-4666.2Show/hide
Query:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A A   +  KRKPVF+KVE+LKPGT+GHTL VKV+ +  V  V +  R A   +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGRIE    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.4e-4367.65Show/hide
Query:  AKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV   N KMV + G    +  + +Q+ RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGR+EVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.4e-4367.65Show/hide
Query:  AKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV   N KMV + G    +  + +Q+ RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGR+EVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein3.3e-4569.4Show/hide
Query:  RKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV
        +KP F KV++L+PGTSGH + VK+VS+   KMV + GR+    AR     RISEC+VGDETG IVFTARNDQVD+MK G+TVTLRNAKIDM+KGSMRLAV
Subjt:  RKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV

Query:  DKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DKWGR+EV EPA+F+VKED N+SL+EYELVNV E
Subjt:  DKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein7.9e-4771.85Show/hide
Query:  KRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA
        K+KPVF+KV++LKPGTSGHTL VKVV   +V    K G ++    RP    RISECLVGDET  I+FTARNDQV++MKPG TV LRNAKIDMFKGSMRLA
Subjt:  KRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA

Query:  VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        VDKWGRIE  EPA+  VKEDNNLSLVEYELVNV E
Subjt:  VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

AT4G28440.1 Nucleic acid-binding, OB-fold-like protein7.2e-4866.2Show/hide
Query:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A A   +  KRKPVF+KVE+LKPGT+GHTL VKV+ +  V  V +  R A   +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGRIE    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCAGCAGTCAATGCCCCGGCAAAGAGGAAGCCGGTCTTCATAAAAGTAGAAGAGCTTAAGCCTGGTACGAGCGGCCATACTCTCATCGTCAAGGTGGTGAG
CTCCAAAAATGTGAAGATGGTCAATAAAGGTGGACGATCCGCGATGCTCACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAAACTGGTT
CCATAGTCTTCACAGCTCGAAATGACCAAGTTGATATCATGAAGCCAGGTAACACCGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGCTCGATGAGGTTAGCA
GTTGATAAATGGGGACGAATTGAAGTTGCCGAACCAGCTAACTTTGAGGTTAAAGAGGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTTGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTGCTTTTCTTGAGGTGGGATCTAACCTCAAAATTTTTAACTTAAGAAAACTTATAAAAAAAAAATAGTAAATGGAAGATAGAAGGACTTGAGAAGACTATAGAGCCCA
AGATTGATGACCTGAGGAGGCCCAGTTATGCGCCACAAAGAAAAAGCCCATATTCTGAGAATCCCAAATGCGAGTGCGACCGCAAAATTAAATTCTTAGGGTTAGGGTTT
TGGTTCCTGGGTTCGAATTTATTCTCCATTTGCACGTCGTTCACTCTCATCGGCAACAGGGTTTCGTTCTGTTACTTCAATTTCCATGGCGACGGCAGCAGTCAATGCCC
CGGCAAAGAGGAAGCCGGTCTTCATAAAAGTAGAAGAGCTTAAGCCTGGTACGAGCGGCCATACTCTCATCGTCAAGGTGGTGAGCTCCAAAAATGTGAAGATGGTCAAT
AAAGGTGGACGATCCGCGATGCTCACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAAACTGGTTCCATAGTCTTCACAGCTCGAAATGA
CCAAGTTGATATCATGAAGCCAGGTAACACCGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGCTCGATGAGGTTAGCAGTTGATAAATGGGGACGAATTGAAG
TTGCCGAACCAGCTAACTTTGAGGTTAAAGAGGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTTGAAGAGTGACTTCAAATAATGCGATGTTGATTTATC
ATGGATTTACTTTCTATTGTGTGGTGGAGGACTGCTGCTATTAACTGGGATACAGTTTTATATAGCAACACAAATCTTGCTGAAAGGGTAATATTAGCTGATTATTGCTG
GGACTATAATTTGGATCTGGAAAGGGAAGTGCAAGTCCTACTTTCTCATCGTATCAATTGGAAAAGTAAATAGAGGGTTTTATCACTGCATATATTTGTTCTGTTAGCTT
AATTTATGGTGAAAAAACAATTGTGATATTTAACTTTGACG
Protein sequenceShow/hide protein sequence
MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA
VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE