; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0330 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0330
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box domain-containing protein
Genome locationMC04:2604842..2605276
RNA-Seq ExpressionMC04g0330
SyntenyMC04g0330
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8008804.1 hypothetical protein FH972_005279 [Carpinus fangiana]4.92e-2035.98Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDI-VRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W+ VP D+M  I    +  D I    VCKSW++++ Q DI   P V WLLLPH    +++ F+++ E   H+I LPK   G   F  G SKGW+      
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDI-VRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFE--ISLFNPITRVEYFLPS-----------------SPIMSSLQRVELSSSNISECTVAAFF
          +  + L NPI+ V+  LPS                 + I S ++++ELSS++IS+C VAA F
Subjt:  TFE--ISLFNPITRVEYFLPS-----------------SPIMSSLQRVELSSSNISECTVAAFF

PQQ00633.1 F-box/kelch-repeat protein [Prunus yedoensis var. nudiflora]3.80e-2034.52Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W ++P DIME I  H +  + I   ++CKSW +L ++ D    P++ WLLLP  S +  +   +V + KFHT+ LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD
         F   L+  NPI+R ++ LPS   + S  +                    LS+S++    C VAA FD
Subjt:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD

VVA31268.1 PREDICTED: F-box/kelch-repeat [Prunus dulcis]1.24e-2035.12Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W +VP DIME I  H +  + I   ++CKSW +L ++ D    P++ WLLLP  S +  + F +V + KFHT++LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNI--SECTVAAFFD
             L+  NPI+R +Y LPS   + S  +                    LS++++  + C VAA FD
Subjt:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNI--SECTVAAFFD

XP_021818908.1 uncharacterized protein LOC110760869 [Prunus avium]5.96e-2034.52Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDK-
        W ++P DIME I  H +  + I  +++CKSW +L ++ D    P++ WLLLP  S +  + F +V + KFHT+ LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDK-

Query:  -VTFEISLFNPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD
         +  ++ L NPI+R ++ LPS   + S  +                    LS+S++    C VAA FD
Subjt:  -VTFEISLFNPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD

XP_022155350.1 uncharacterized protein LOC111022492 [Momordica charantia]5.46e-4459.86Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKVT
        W ++P D+ME IAL  +STDYI +SMVCKSWQ+LLLQSDI+RP+  WLLLPH S++ T++ Y+V E+KFHT      +DG    VG CSKGWVIF   V 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKVT

Query:  FEISLFNPITRVEYFLPSSPIMSSLQRVELSSSNISECTVAA
         +ISLFNPI+  +  L S P   SLQRVELSSS ISECTV A
Subjt:  FEISLFNPITRVEYFLPSSPIMSSLQRVELSSSNISECTVAA

TrEMBL top hitse value%identityAlignment
A0A314Y2Z7 F-box/kelch-repeat protein1.84e-2034.52Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W ++P DIME I  H +  + I   ++CKSW +L ++ D    P++ WLLLP  S +  +   +V + KFHT+ LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD
         F   L+  NPI+R ++ LPS   + S  +                    LS+S++    C VAA FD
Subjt:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD

A0A5E4FUV8 PREDICTED: F-box/kelch-repeat5.99e-2135.12Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W +VP DIME I  H +  + I   ++CKSW +L ++ D    P++ WLLLP  S +  + F +V + KFHT++LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNI--SECTVAAFFD
             L+  NPI+R +Y LPS   + S  +                    LS++++  + C VAA FD
Subjt:  TFEISLF--NPITRVEYFLPSSPIMSSLQRV------------------ELSSSNI--SECTVAAFFD

A0A5N6QP56 F-box domain-containing protein2.38e-2035.98Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDI-VRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV
        W+ VP D+M  I    +  D I    VCKSW++++ Q DI   P V WLLLPH    +++ F+++ E   H+I LPK   G   F  G SKGW+      
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDI-VRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKV

Query:  TFE--ISLFNPITRVEYFLPS-----------------SPIMSSLQRVELSSSNISECTVAAFF
          +  + L NPI+ V+  LPS                 + I S ++++ELSS++IS+C VAA F
Subjt:  TFE--ISLFNPITRVEYFLPS-----------------SPIMSSLQRVELSSSNISECTVAAFF

A0A6J1DM79 uncharacterized protein LOC1110224922.65e-4459.86Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKVT
        W ++P D+ME IAL  +STDYI +SMVCKSWQ+LLLQSDI+RP+  WLLLPH S++ T++ Y+V E+KFHT      +DG    VG CSKGWVIF   V 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKVT

Query:  FEISLFNPITRVEYFLPSSPIMSSLQRVELSSSNISECTVAA
         +ISLFNPI+  +  L S P   SLQRVELSSS ISECTV A
Subjt:  FEISLFNPITRVEYFLPSSPIMSSLQRVELSSSNISECTVAA

A0A6P5SZ44 uncharacterized protein LOC1107608692.89e-2034.52Show/hide
Query:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDK-
        W ++P DIME I  H +  + I  +++CKSW +L ++ D    P++ WLLLP  S +  + F +V + KFHT+ LPK + G RV   GCSKGW++ + + 
Subjt:  WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVR-PKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDK-

Query:  -VTFEISLFNPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD
         +  ++ L NPI+R ++ LPS   + S  +                    LS+S++    C VAA FD
Subjt:  -VTFEISLFNPITRVEYFLPSSPIMSSLQRV------------------ELSSSNISE--CTVAAFFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATAGTGTGCCAAAAGATATCATGGAGGGAATTGCTTTGCATTTTAGTTCAACTGATTATATTCATAGCTCTATGGTTTGCAAATCATGGCAAGCACTTCTTCTGCA
ATCTGATATTGTTAGGCCAAAAGTGCTTTGGCTTTTGCTTCCACATCGCTCAACTAGAGACACCATGCAATTCTACAATGTTTTGGAGGACAAATTTCACACCATTGTGT
TGCCAAAGGTCATTGATGGGAGTAGGGTTTTTGTTGGGGGGTGTTCCAAAGGTTGGGTTATTTTCATGGATAAAGTTACGTTTGAGATCTCTCTTTTTAATCCCATCACT
CGGGTCGAGTACTTCCTTCCATCGTCACCAATCATGTCGTCTTTACAGCGCGTTGAATTATCTTCATCGAATATTTCAGAGTGTACTGTGGCTGCATTCTTTGAC
mRNA sequenceShow/hide mRNA sequence
TGGAATAGTGTGCCAAAAGATATCATGGAGGGAATTGCTTTGCATTTTAGTTCAACTGATTATATTCATAGCTCTATGGTTTGCAAATCATGGCAAGCACTTCTTCTGCA
ATCTGATATTGTTAGGCCAAAAGTGCTTTGGCTTTTGCTTCCACATCGCTCAACTAGAGACACCATGCAATTCTACAATGTTTTGGAGGACAAATTTCACACCATTGTGT
TGCCAAAGGTCATTGATGGGAGTAGGGTTTTTGTTGGGGGGTGTTCCAAAGGTTGGGTTATTTTCATGGATAAAGTTACGTTTGAGATCTCTCTTTTTAATCCCATCACT
CGGGTCGAGTACTTCCTTCCATCGTCACCAATCATGTCGTCTTTACAGCGCGTTGAATTATCTTCATCGAATATTTCAGAGTGTACTGTGGCTGCATTCTTTGAC
Protein sequenceShow/hide protein sequence
WNSVPKDIMEGIALHFSSTDYIHSSMVCKSWQALLLQSDIVRPKVLWLLLPHRSTRDTMQFYNVLEDKFHTIVLPKVIDGSRVFVGGCSKGWVIFMDKVTFEISLFNPIT
RVEYFLPSSPIMSSLQRVELSSSNISECTVAAFFD