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MC04g0370 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0370
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDDB1- and CUL4-associated factor 8
Genome locationMC04:2960121..2960369
RNA-Seq ExpressionMC04g0370
SyntenyMC04g0370
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR045151 - DDB1- and CUL4-associated factor 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040313.1 DDB1- and CUL4-associated factor 8 [Cucumis melo var. makuwa]2.54e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

TYK23393.1 DDB1- and CUL4-associated factor 8 [Cucumis melo var. makuwa]5.39e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

XP_004144864.1 DDB1- and CUL4-associated factor 8 [Cucumis sativus]1.50e-5195.18Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGG+LIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

XP_008447917.1 PREDICTED: DDB1- and CUL4-associated factor 8 [Cucumis melo]5.39e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

XP_022136068.1 DDB1- and CUL4-associated factor 8 [Momordica charantia]4.97e-53100Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

TrEMBL top hitse value%identityAlignment
A0A0A0K4R4 Uncharacterized protein7.25e-5295.18Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGG+LIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

A0A1S3BIJ4 DDB1- and CUL4-associated factor 82.61e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

A0A5A7TB61 DDB1-and CUL4-associated factor 81.23e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

A0A5D3DIH7 DDB1-and CUL4-associated factor 82.61e-5296.39Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIW+KKGGELIRVMEADEDVVNCIEPHPH+TMLASSGIESD+KIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

A0A6J1C6L2 DDB1- and CUL4-associated factor 82.41e-53100Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

SwissProt top hitse value%identityAlignment
Q5R448 DDB1- and CUL4-associated factor 86.0e-2863.41Show/hide
Query:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        YKGHRN  TVKGVNF+GPK E+VVSGSDCG IF+W+K   ++I+ ME D+  VVNC+EPHPH+ +LA+SG++ D+KIW P A
Subjt:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA

Q5TAQ9 DDB1- and CUL4-associated factor 86.0e-2863.41Show/hide
Query:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        YKGHRN  TVKGVNF+GPK E+VVSGSDCG IF+W+K   ++I+ ME D+  VVNC+EPHPH+ +LA+SG++ D+KIW P A
Subjt:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA

Q5U2M6 DDB1- and CUL4-associated factor 86.0e-2863.41Show/hide
Query:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        YKGHRN  TVKGVNF+GPK E+VVSGSDCG IF+W+K   ++I+ ME D+  VVNC+EPHPH+ +LA+SG++ D+KIW P A
Subjt:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA

Q6NRH1 DDB1- and CUL4-associated factor 86.6e-2759.76Show/hide
Query:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        YKGHRN  TVKGVNF+GP+ E+VVSGSDCG IF+W+K   ++++ M+ D+  VVNC+EPHPH+ +LA+SG++ D+KIW P A
Subjt:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA

Q8N7N5 DDB1- and CUL4-associated factor 86.0e-2863.41Show/hide
Query:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        YKGHRN  TVKGVNF+GPK E+VVSGSDCG IF+W+K   ++I+ ME D+  VVNC+EPHPH+ +LA+SG++ D+KIW P A
Subjt:  YKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADE-DVVNCIEPHPHVTMLASSGIESDIKIWTPKA

Arabidopsis top hitse value%identityAlignment
AT3G45620.1 Transducin/WD40 repeat-like superfamily protein2.7e-3169.14Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP
        QVY GHRN +TVKGVNFFGP  EYV SGSDCG IFIWKKKGG+L+R M  D  VVN +E HPH+ +LAS GIE  +K+WTP
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP

AT3G45620.2 Transducin/WD40 repeat-like superfamily protein2.7e-3169.14Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP
        QVY GHRN +TVKGVNFFGP  EYV SGSDCG IFIWKKKGG+L+R M  D  VVN +E HPH+ +LAS GIE  +K+WTP
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP

AT4G35140.1 Transducin/WD40 repeat-like superfamily protein8.3e-4186.59Show/hide
Query:  VYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        VYKGH+NCETVKGVNFFGP+ EYVVSGSDCGRIFIW+KKGGELIRVMEAD  VVNCIEPHPH+ +LASSGIESDIK+WT KA
Subjt:  VYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA

AT4G38480.1 Transducin/WD40 repeat-like superfamily protein2.8e-3679.01Show/hide
Query:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP
        QVYK H N ETVKGVNFFGPKCEYVVSGSDCGRIFIW+KK GEL+R MEAD  VVNCIE HPH+ ++ SSGI++DIKIWTP
Subjt:  QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTP

AT5G10940.1 transducin family protein / WD-40 repeat family protein2.3e-1950Show/hide
Query:  YKGHRNCET-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA
        Y GH N  T +K  +F G + EY+ SGSD GR FIW+K+ G L++V+  DE V+NCI+ HP  +++A+SGI++ IKIW+P A
Subjt:  YKGHRNCET-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGTTTATAAAGGACATAGAAACTGTGAGACGGTAAAAGGTGTCAACTTTTTTGGACCGAAATGTGAGTATGTCGTTAGCGGATCTGATTGTGGCAGAATATTTATATG
GAAGAAAAAGGGTGGAGAGCTAATCCGAGTCATGGAAGCAGATGAGGATGTCGTGAACTGCATTGAGCCGCATCCTCACGTGACCATGCTTGCTAGTAGTGGAATTGAAA
GCGACATCAAGATATGGACTCCAAAGGCC
mRNA sequenceShow/hide mRNA sequence
CAAGTTTATAAAGGACATAGAAACTGTGAGACGGTAAAAGGTGTCAACTTTTTTGGACCGAAATGTGAGTATGTCGTTAGCGGATCTGATTGTGGCAGAATATTTATATG
GAAGAAAAAGGGTGGAGAGCTAATCCGAGTCATGGAAGCAGATGAGGATGTCGTGAACTGCATTGAGCCGCATCCTCACGTGACCATGCTTGCTAGTAGTGGAATTGAAA
GCGACATCAAGATATGGACTCCAAAGGCC
Protein sequenceShow/hide protein sequence
QVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVMEADEDVVNCIEPHPHVTMLASSGIESDIKIWTPKA