; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0412 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0412
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSignal sequence receptor subunit alpha
Genome locationMC04:3274630..3279182
RNA-Seq ExpressionMC04g0412
SyntenyMC04g0412
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005595 - Translocon-associated protein (TRAP), alpha subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572098.1 Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]5.29e-15388.42Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MK F VFFLALLLLASP  + ATCQSDSD E+SE VEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE++Q AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_022135777.1 translocon-associated protein subunit alpha-like [Momordica charantia]1.26e-174100Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_022952473.1 translocon-associated protein subunit alpha-like [Cucurbita moschata]2.62e-15388.8Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MK F VFFLALLLLASP  + ATCQSDSD E+SEVVEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE++Q AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_023553718.1 translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]6.17e-15287.64Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MK F VFFLALLLLASP  + ATCQSDSD E+SE VEEASD+GIVGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKAS+HYTFDH MLIQNLTGQVFHNATV PS QA++PYIFAVSKFLQPGNFDLVGTIFYE++Q AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_038886848.1 translocon-associated protein subunit alpha-like [Benincasa hispida]7.79e-15388.03Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        M  F VFFLA LLLASP  + ATCQSDSD E+SE VEE SDLGIVGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKAS+HYTFDH +LIQNLTGQVFHNATV PSTQAT+PY+FAVSKFLQPGNFDLVGTIFYE++QNAYQS+F+NGTIEVVEASG+ISIESVFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLL LWIHGQIQQKLSKK KR ASKVEVGTKTVDTSMDEWLQGTAY +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0K182 Signal sequence receptor subunit alpha1.47e-15086.1Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        M  F +FFLALLLLASP  + ATCQSDSD E+SE VE+ SDLGIVG+EDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKAS+HYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSK+LQPGNFDLVGTIFYE++QNAYQS+F+NGTIEVVEASG+IS+ESVFLV+LGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLL LWIHGQIQQKLSKK KRAASKVEVGTKTVDTSMDEWLQGTAY +S SNK KKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A5D3CLZ0 Signal sequence receptor subunit alpha1.03e-15086.1Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        M  F VFFLALLLLASP  + ATCQ+DSD E SE VEE SDLGIVG+EDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEET+LLAGVKNDGESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKAS+HYTFDH MLIQNLTGQVFHNATV PS QA++PYIFAVSK+LQPGNFDLVGTIFYE++QNAYQS+F+NGTIEVVEASG+IS+ESVFLV+LGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLL LWIHGQIQQKLSKK KRAASKVEVGTKT+DTSMDEWLQGTAY +S SNK KKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1C3Q7 Signal sequence receptor subunit alpha6.09e-175100Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1GKP1 Signal sequence receptor subunit alpha1.27e-15388.8Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MK F VFFLALLLLASP  + ATCQSDSD E+SEVVEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE++Q AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1I2T7 Signal sequence receptor subunit alpha6.02e-15288.42Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
        MK F VFFLALLLLASP  + AT QSDSD E+SE VEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNI

Query:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL
        IAIKASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE++Q AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIAL
Subjt:  IAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIAL

Query:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LVLLGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

SwissProt top hitse value%identityAlignment
A6QLP7 Translocon-associated protein subunit alpha4.8e-1531.01Show/hide
Query:  VFFLALLLLASPVFRVATCQS-DSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDG
        VF   LLL   P   +A  Q    D ET E  ++E+  D   V E++  D  E      V+  P  +P  DT  +F K      PA    + L G  N G
Subjt:  VFFLALLLLASPVFRVATCQS-DSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDG

Query:  ESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVISIESVFL
             + ++ AS  Y  D+   IQN T     N  V P  QATF Y F  ++ +    F LV  + Y ++N N +Q   FN T+ ++E    +  E++F+
Subjt:  ESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVISIESVFL

Query:  VTL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ
             G+ LLV++GL  H  ++   S+K KR   KVE+GT + +     W+     NQ
Subjt:  VTL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ

P16967 Translocon-associated protein subunit alpha1.8e-1430.68Show/hide
Query:  LALLLLASPV----------FRVATCQSDSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLA
        L LLLLA P             VA      D ET E  ++E+  D   V E++  D  E      V+  P  +P  DT  +F K      PA    + L 
Subjt:  LALLLLASPV----------FRVATCQSDSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLA

Query:  GVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVIS
        G  N G     + ++ AS  Y  D+   IQN T     N  V P  QATF Y F  ++ +    F LV  + Y ++N N +Q   FN T+ ++E    + 
Subjt:  GVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVIS

Query:  IESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ
         E++F+     G+ LLV++GL  H  ++   S+K KR   KVE+GT + +     W+     NQ
Subjt:  IESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ

P45434 Translocon-associated protein subunit alpha9.5e-7257.09Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS
        M    V FLALLLLASP+ +VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ 
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS

Query:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLG
        + ++ I+ASVH  +DH +L+QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V    YQSVF+NGTIEVVE+ G++S ESVFL+TLG
Subjt:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLG

Query:  IALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        I LL+LLGLW + Q+ Q+L+KKTK+  SKVEVGT++ + S+DEWL+GT   ++ S K+K K
Subjt:  IALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

Q54R45 Translocon-associated protein subunit alpha3.3e-1629.7Show/hide
Query:  VNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDL
        V   P   V    +FP N  +   AG   E+L G  N+ + +LNI  I AS+++  D  + IQN T   F    V     AT  Y F  S++L+P  F L
Subjt:  VNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDL

Query:  VGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKS
        + ++ Y+     +   FFN TI + E      ++S FL+ LG+  +  +G  ++G++ ++   +T    +K  V  +T D +  EWL GT+   S+    
Subjt:  VGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKS

Query:  KK
        +K
Subjt:  KK

Q9CY50 Translocon-associated protein subunit alpha8.2e-1529.96Show/hide
Query:  FFLALLLLASPVFRVATCQSDSDSE---TSEVVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGE
        F  A+LL   P   +A  Q  ++ E      ++E+  D   V E++  D  E      V+  P  +P  DT  +F K      PA    + L G  N G 
Subjt:  FFLALLLLASPVFRVATCQSDSDSE---TSEVVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGE

Query:  SSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVISIESVFLV
            + ++ AS  Y  D+   IQN T     N  V P  QATF Y F  ++ +    F LV  + Y ++N N +Q   FN T+ V+E    +  E++F+ 
Subjt:  SSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVNQNAYQSVFFNGTIEVVEASGVISIESVFLV

Query:  TL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ
            G+ LLV++GL  H  ++   S+K KR   KVE+GT + +     W+     NQ
Subjt:  TL--GIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ

Arabidopsis top hitse value%identityAlignment
AT2G16595.1 Translocon-associated protein (TRAP), alpha subunit1.2e-6152.94Show/hide
Query:  FSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F + F A LLL SP  +VA CQSDS+    EV    SD+G   E D+++   +    APG++T+CVFPKNSA+I+ AG ETELL G+KNDG+S+++I+A+
Subjt:  FSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        K S+H  FD +  +QNLT   F NA+V  S QAT PY FAVSKFLQ G FD VGTI YE++   YQS+F+NGTIEVVE   +  +ESVFL  L I ++  
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        L ++I   + + ++KKTKR A KVEVGT T D S DEWL+GT+Y QS S   KKK
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

AT2G21160.1 Translocon-associated protein (TRAP), alpha subunit6.7e-7357.09Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS
        M    V FLALLLLASP+ +VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ 
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS

Query:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLG
        + ++ I+ASVH  +DH +L+QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V    YQSVF+NGTIEVVE+ G++S ESVFL+TLG
Subjt:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLG

Query:  IALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        I LL+LLGLW + Q+ Q+L+KKTK+  SKVEVGT++ + S+DEWL+GT   ++ S K+K K
Subjt:  IALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

AT2G21160.2 Translocon-associated protein (TRAP), alpha subunit1.1e-5157.22Show/hide
Query:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS
        M    V FLALLLLASP+ +VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ 
Subjt:  MKPFSVFFLALLLLASPVFRVATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESS

Query:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASG
        + ++ I+ASVH  +DH +L+QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V    YQSVF+NGTIEVVE+ G
Subjt:  LNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCTTCTCAGTTTTCTTCCTCGCCCTTCTCCTTCTCGCCTCTCCAGTTTTCAGAGTTGCCACGTGCCAGTCGGACTCTGATAGCGAAACATCTGAGGTTGTTGA
AGAAGCTAGCGATCTTGGAATTGTGGGTGAAGAAGATTCCCAGGATTTTGGAGAAGTGAATTTTGCTCCAGCTCCCGGAGTTGATACTGTCTGTGTTTTTCCAAAGAATA
GTGCACGCATAGTGCCTGCTGGAGAAGAGACTGAACTTCTCGCTGGAGTGAAAAATGATGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCGTTCATTATACC
TTTGATCATCATATGTTGATTCAAAATCTTACTGGACAGGTCTTCCACAACGCAACGGTGCACCCATCAACTCAAGCTACTTTCCCATACATATTTGCTGTCAGCAAGTT
TTTGCAGCCTGGAAACTTTGATCTAGTGGGCACCATATTTTATGAAGTAAACCAGAATGCATATCAAAGCGTATTCTTTAATGGTACTATTGAAGTCGTTGAAGCTAGTG
GTGTCATCAGCATCGAGTCTGTGTTTTTAGTTACTCTTGGAATTGCCCTTCTCGTCCTGCTGGGCTTATGGATTCATGGTCAAATACAGCAAAAACTCTCAAAGAAAACC
AAGAGGGCTGCTTCGAAGGTTGAAGTGGGAACGAAAACTGTAGATACCTCAATGGATGAATGGCTTCAGGGAACTGCATACAACCAGTCCCAATCAAACAAGTCAAAGAA
AAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAAGAAAAAAAAATACTCGATACGGAATTGAGTTCAATTGTAGAGACCAAGTTGATAATTTTACGGAAAAATAGAAATGGAGAAAAACGTGTAGGAATTGGAGACTG
CAAAACGATTGGCGTCTGGTCGAACCGGGTTTCCGATTCCCAAATAAAGGTCGCTCCTTTTCCTCGATCCCCAACTTTGACCCTCCACAATCGAAGCTTGGTTTTTCTCT
CTCTCTCTAATCGGAGTTTCAACTCTCAATCTACCTTCTCCGTTTGATTCGCCATGAAACCCTTCTCAGTTTTCTTCCTCGCCCTTCTCCTTCTCGCCTCTCCAGTTTTC
AGAGTTGCCACGTGCCAGTCGGACTCTGATAGCGAAACATCTGAGGTTGTTGAAGAAGCTAGCGATCTTGGAATTGTGGGTGAAGAAGATTCCCAGGATTTTGGAGAAGT
GAATTTTGCTCCAGCTCCCGGAGTTGATACTGTCTGTGTTTTTCCAAAGAATAGTGCACGCATAGTGCCTGCTGGAGAAGAGACTGAACTTCTCGCTGGAGTGAAAAATG
ATGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCGTTCATTATACCTTTGATCATCATATGTTGATTCAAAATCTTACTGGACAGGTCTTCCACAACGCAACG
GTGCACCCATCAACTCAAGCTACTTTCCCATACATATTTGCTGTCAGCAAGTTTTTGCAGCCTGGAAACTTTGATCTAGTGGGCACCATATTTTATGAAGTAAACCAGAA
TGCATATCAAAGCGTATTCTTTAATGGTACTATTGAAGTCGTTGAAGCTAGTGGTGTCATCAGCATCGAGTCTGTGTTTTTAGTTACTCTTGGAATTGCCCTTCTCGTCC
TGCTGGGCTTATGGATTCATGGTCAAATACAGCAAAAACTCTCAAAGAAAACCAAGAGGGCTGCTTCGAAGGTTGAAGTGGGAACGAAAACTGTAGATACCTCAATGGAT
GAATGGCTTCAGGGAACTGCATACAACCAGTCCCAATCAAACAAGTCAAAGAAAAAGAATTAACCGAGGACTCGACTCGTCTCCATCCCAGTTGCATAGTACACTAACAA
TGTGCAGATTCCTGCAACTCGCGTTAGGCAGTTGAAGATTTGAGGAGAGAGTTAAGGGTTTTGACTAGTTTTGGAACTTAGGTGCGTTAAACCCTTCCTTGCCGGTGTAG
CATGTCAAAGAATCCTTCACATTCTGCATTTCTTAGTGCCAATCTAAACTAAGTTTGAAATGATACAGTTTTCTGAATCTAGAGAATTTCCTTGAAGCATATGATTATCA
AAGTTTAATCTTCTAGACTTTCCTTGGCACCCTTTTTCTGTATGCATCACGGTTTCGGCTTCGTTGAATCATCAATGTAGCGGGGCATGCAGGTTGACGATTTCTCTTGG
ACAACTCTGACCTCTACTTTACTGGAAAGTTTTGCTCGTTCGACATCTGTGTTGATGTCGTGTCGTGCCGACCTTTCTATTAGACTTTTAATTCGCTAAATATCAGTTTT
TTCCCTCATTAAATTGCCCCATGTGATGTCTTGGCTGGTACCTTTCATGCTTGGATGTAATATGGAACAGAATTTGATTTTGTGAGGAGAAAAATGGAGAATTGGTTGAA
TTGCTTAAGAGTTGGGTAAAGATTATTAAATTGGACGTGATTGGGAGGCCATATGCCAGCAAGGA
Protein sequenceShow/hide protein sequence
MKPFSVFFLALLLLASPVFRVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYT
FDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVNQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKT
KRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN