; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0417 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0417
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribosomal protein L16
Genome locationMC04:3294951..3295235
RNA-Seq ExpressionMC04g0417
SyntenyMC04g0417
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_003587232.1 ribosomal protein L16 [Citrullus lanatus]6.63e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSKY KG+CSRGCKPDGTQLGFGRY  +SCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRV ADLPITGKPTEVRMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

YP_009230369.1 ribosomal protein L16, partial [Salix suchowensis]4.66e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

YP_009239021.1 ribosomal protein L16 [Salix purpurea]4.66e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

YP_009560664.1 ribosomal protein L16, partial [Populus alba]4.97e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

YP_009745364.1 ribosomal protein L16 [Salix paraflabellaris]4.66e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

TrEMBL top hitse value%identityAlignment
A0A109WWC5 Ribosomal protein L16 (Fragment)2.26e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

A0A140HPA9 Ribosomal protein L162.26e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

A0A451FPI4 Ribosomal protein L16 (Fragment)2.41e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

A0A7G9ISX8 Ribosomal protein L162.26e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

A0A7G9IT15 Ribosomal protein L162.26e-5892.63Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TKYSK  KG+CSRGCKPDGTQLGFGRY TKSC+AGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTE+RMGRGKGNPTGWIA VSTG
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

SwissProt top hitse value%identityAlignment
P27927 60S ribosomal protein L16, mitochondrial4.6e-4081.55Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        TKYSKY K +CSRG +PDGTQLGFGRY TKS RAGRLSYRAIEAARRA I        GQFRRN KIWVRVLADLPITGKP EVRMGRGKGNPTGWIA V
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        STG
Subjt:  STG

P46801 60S ribosomal protein L16, mitochondrial1.3e-4283.5Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        TKYSKY K +CSRGC+PDGTQLGFGRY TKSCRAGRLSYRAIEAARRA I        GQFRRN KIWVRVLADLPITGKP EVRMGRGKGNPTGWIA V
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        STG
Subjt:  STG

P49389 60S ribosomal protein L16, mitochondrial1.9e-4181.55Show/hide
Query:  KYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII---------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        K +KY KG+CSRGCKPDGT+LGFGRY TKSCRAGRLSYRAIEAARRA I         GQFRRN KIWVRVLADLPITGKP EVRMGRGKGNPTGWIA V
Subjt:  KYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII---------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        STG
Subjt:  STG

Q04715 60S ribosomal protein L16, mitochondrial3.6e-4586.41Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        TKYSKY KG+CSRGCKPDGTQLGFGRY TKSCRAGRLSYRAIEAARRAII        GQFRRNGKIWVRVLAD+PITGKPTEVRMGRGKGNPTGWIA V
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        S G
Subjt:  STG

Q95747 60S ribosomal protein L16, mitochondrial3.4e-4383.5Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        TKYSKY KG+CSRGCKPDGT+LGFGRY  KSC+AG LSYRAIEAARRAII        GQFRRNGKIWVRV ADLPITGKPTEVRMGRGKGNPTGWIA V
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        STG
Subjt:  STG

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 122.7e-1136.84Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        TK+ K+ +G+ ++G    G      RY  ++     ++ R IEA RRA+     R   + V + AD P+T +P E RMGRGKG P  W+A V  G
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

ATCG00790.1 ribosomal protein L162.8e-1642.11Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG
        T++ K  +G+  +G    G ++ FGRY  ++     ++ R IEA RRA+    RR GKIWVR+  D P+T +P E RMG GKG+P  W+A V  G
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG

ATMG00080.1 ribosomal protein L165.7e-4685.44Show/hide
Query:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV
        TKYSKY KG+CSRGCKPDGT+LGFGRY TKSC+AGRLSYRAIEAARRAII        GQFRRNGKIWVRV ADLPITGKPTEVRMGRGKGNPTGWIA V
Subjt:  TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAII--------GQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHV

Query:  STG
        STG
Subjt:  STG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGAAATATAGTAAATATTGTAAAGGCAAATGTAGTAGGGGTTGCAAACCAGACGGTACACAACTTGGTTTTGGAAGATATGACACTAAAAGTTGTAGAGCTGGTCGTCT
TTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATAATCGGACAATTCCGAAGAAATGGTAAAATATGGGTAAGAGTTCTCGCGGATCTCCCTATTACCGGGAAACCTA
CAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCATGTGTCCACGGGA
mRNA sequenceShow/hide mRNA sequence
ACGAAATATAGTAAATATTGTAAAGGCAAATGTAGTAGGGGTTGCAAACCAGACGGTACACAACTTGGTTTTGGAAGATATGACACTAAAAGTTGTAGAGCTGGTCGTCT
TTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATAATCGGACAATTCCGAAGAAATGGTAAAATATGGGTAAGAGTTCTCGCGGATCTCCCTATTACCGGGAAACCTA
CAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCATGTGTCCACGGGA
Protein sequenceShow/hide protein sequence
TKYSKYCKGKCSRGCKPDGTQLGFGRYDTKSCRAGRLSYRAIEAARRAIIGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIAHVSTG