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MC04g0425 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0425
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationMC04:3397860..3398054
RNA-Seq ExpressionMC04g0425
SyntenyMC04g0425
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588978.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.34e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_022952665.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]4.09e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_022969389.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.17e-4095.38Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_022989149.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]5.06e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_038887253.1 auxin-responsive protein SAUR50-like [Benincasa hispida]4.22e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein9.43e-4093.85Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1EKI0 auxin-responsive protein SAUR50-like2.34e-4095.38Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAAL+
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1GME7 auxin-responsive protein SAUR50-like1.98e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1I2G2 auxin-responsive protein SAUR50-like5.68e-4195.38Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1JNJ6 auxin-responsive protein SAUR50-like2.45e-4196.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.4e-2473.85Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++LT+ ++
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

P0DKL1 Auxin-responsive protein SAUR507.5e-1866.1Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS
        VPKGHF VYVGE R+R++VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+E+ F S
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS

P33081 Auxin-induced protein 15A1.7e-1459.38Show/hide
Query:  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL
        PKG+ AVYVGE   R V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL

P33082 Auxin-induced protein X152.3e-1457.81Show/hide
Query:  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL
        PKG+ AVYVGE   R V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T  L
Subjt:  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.9e-2170.77Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVG NRSR++VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+E+ FRSL +  +
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family8.5e-2576.92Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVGENR R+VVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEE+VFRSLT+ L+
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT2G16580.1 SAUR-like auxin-responsive protein family5.5e-2472.31Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVG NRSR++VPIS LT+ DFQCLLR AEEEFGF H MGLTIPC+EL F+ LT+ ++
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT2G21220.1 SAUR-like auxin-responsive protein family2.5e-2475Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL
        VPKGHF VYVGE RSR++VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEE+VFRSLT+ +
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL

AT4G34760.1 SAUR-like auxin-responsive protein family3.8e-2573.85Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++LT+ ++
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT4G36110.1 SAUR-like auxin-responsive protein family8.0e-2370.77Show/hide
Query:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        VPKGHF VYVG++RSR+VVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+E+VFRSL +  +
Subjt:  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTCCCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGA
GGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAA
mRNA sequenceShow/hide mRNA sequence
GTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTCCCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGA
GGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAA
Protein sequenceShow/hide protein sequence
VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK