; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0443 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0443
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCRM domain-containing protein
Genome locationMC04:3545642..3549277
RNA-Seq ExpressionMC04g0443
SyntenyMC04g0443
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]5.10e-11972.13Show/hide
Query:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED
        MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +S  S V F E+DD I+D++
Subjt:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        +SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
         NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]3.51e-11267.36Show/hide
Query:  MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDE
        M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SPH  R F PS S+S ++ FSS +S PSEV F+E DDEIED+
Subjt:  MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV +      E+S+G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKI
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_022135882.1 uncharacterized protein LOC111007723 [Momordica charantia]5.03e-117100Show/hide
Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]1.79e-11972.47Show/hide
Query:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED
        MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +S  S V F E+DD I+D+D
Subjt:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        +SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
         NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]2.54e-11871.33Show/hide
Query:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED
        MGASIMSS    HLIHSLLLRSVP S S+  S  +AA+S  C  QF+PNSSIFLIR+SPHR R F+PSASVS ++SFSS +S  S V F E+DD I+D+D
Subjt:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVD------FELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANEL
        +SDYE EV I D      FELE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANEL
Subjt:  DSDYEGEVRIVD------FELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANEL

Query:  LKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        LKIK+L NCP EL+D V+QLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  LKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein1.66e-11166.43Show/hide
Query:  MGASIMSSRPHLIHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED
        MGASI+SS  H   SLLLRS+P S S+     + AAA+ST CF QF+P+SS  L R SPH +R F PSA +S ++SFSS +S PSEV F+E DDEIED+D
Subjt:  MGASIMSSRPHLIHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        +SDYE EV +      E+ +G  ++    S+LSS +++ +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR
         NCP EL+D VR+L ESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARK+Y+RKEPDRVKSILQ K++TP   +SNRGRRG+SR
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903501.70e-11267.36Show/hide
Query:  MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDE
        M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SPH  R F PS S+S ++ FSS +S PSEV F+E DDEIED+
Subjt:  MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV +      E+S+G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKI
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein1.69e-7778.53Show/hide
Query:  QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVS
        +    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL NCP EL+D VR+LEESTGSVVV+
Subjt:  QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVS

Query:  QIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  QIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A6J1C409 uncharacterized protein LOC1110077232.43e-117100Show/hide
Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A6J1I2Z3 uncharacterized protein LOC1114700608.65e-12072.47Show/hide
Query:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED
        MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +S  S V F E+DD I+D+D
Subjt:  MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        +SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
         NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY8.4e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY8.4e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY8.4e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI1.1e-0735.42Show/hide
Query:  LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L+NC  + +D    L + + S +V  IG T+++Y+ S    + E
Subjt:  LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.5e-2840.16Show/hide
Query:  MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDY
        M  +  S+  +LIH LL    P      T+   L        RP S   L R+S H       S+S+ + + + S         F+  D+  +DED+   
Subjt:  MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDY

Query:  EGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCP
              V        I  + Q D  S+L+   +  +   +   L+ KEK++LASYAH LG KLK+QLVGKSGVT  + +SFVETLE NELLK+KI R CP
Subjt:  EGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCP

Query:  VELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQ
         EL+D + +LEE+TGSV V QI RTVI+YRPS +K+KA+E K++
Subjt:  VELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQ

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.1e-3542.11Show/hide
Query:  ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDD
        AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+    P  S S V +SFSS      E +  EED+E EDED 
Subjt:  ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDD

Query:  SDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVE
        S  E E    + E E++S        I     ++ VS++          K   S      L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF+E
Subjt:  SDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVE

Query:  TLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRGRR
        TLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIGRTVI+YRPS +KMKAE KK++  ++ + +          K   +   + P      RGRR
Subjt:  TLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRGRR

Query:  GSSR
        G SR
Subjt:  GSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein2.7e-3544.24Show/hide
Query:  ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDD
        AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+    P  S S V +SFSS      E +  EED+E EDED 
Subjt:  ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDD

Query:  SDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVE
        S  E E    + E E++S        I     ++ VS++          K   S      L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF+E
Subjt:  SDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVE

Query:  TLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRK
        TLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIGRTVI+YRPS +KMKAE KK++  ++ + +
Subjt:  TLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGG
TTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTT
CCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAA
CTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAA
GGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGA
CGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGT
CAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGT
GAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAA
TATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCA
CCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAA
TCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAA
TTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCA
AGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATA
GCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAA
ATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCC
CAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACAC
CCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTC
CCATCCCATTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAG
TGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAA
CGAGTATTTTATTTAAGAGGATGATTCAAAAT
Protein sequenceShow/hide protein sequence
MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFE
LEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVS
QIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF