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MC04g0484 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0484
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC04:4039588..4039835
RNA-Seq ExpressionMC04g0484
SyntenyMC04g0484
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044255 - cellular lipid metabolic process (biological process)
GO:0043229 - intracellular organelle (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065894.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.12e-0842.53Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHH----------GSPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL I N+ DTN AL  KWL RF  EKDSLW  LI+VKY+      HH           + K+PW  I K    F     WK+  GK+
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHH----------GSPKSPWFHIKKFTHLFHGLTNWKVGNGKS

PON86224.1 hypothetical protein TorRG33x02_179430, partial [Trema orientale]9.21e-0739.02Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPH-----SHHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL IG ++  NKAL +KWL RF  EKD+LW  +I  KY           +   + +SPW  I K   +F+ +  +KVGNG +
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPH-----SHHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKS

TYK10887.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.37e-0638.37Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHG---------SPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL I  + DTN+AL  KWL R+  E +SLW   I  KY      +H G         S KSPW  IKK+   F    +W   +G S
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHG---------SPKSPWFHIKKFTHLFHGLTNWKVGNGKS

XP_028056784.1 uncharacterized protein LOC114260796 [Camellia sinensis]1.12e-0741.18Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHS-----HHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKSFFF
        GL+I NI+  N A   KWL RF  E +SLW S+I  KY  Q         + G+ +SPW  I +   L     ++KVGNGKS+ F
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHS-----HHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKSFFF

XP_030497604.1 uncharacterized protein LOC115713262 [Cannabis sativa]8.12e-0841.18Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEA--QFPHSHHGS---PKSPWFHIKKFTHLFHGLTNWKVGNGKSFFF
        GL IGN+  TNK L +KWL RF  E +SLW  ++  +Y     F  +  GS   PK PW  I      + GL  +K+GNG S +F
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEA--QFPHSHHGS---PKSPWFHIKKFTHLFHGLTNWKVGNGKSFFF

TrEMBL top hitse value%identityAlignment
A0A2N9FY27 Importin N-terminal domain-containing protein9.46e-0740Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHGSPKSP-----WFHIKKFTHLFHGLTNWKVGNG
        GL I N+I +N+AL  KWL RF  E+D+LW  ++A+KY     +   G    P     W HI+K    F G   ++VGNG
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHGSPKSP-----WFHIKKFTHLFHGLTNWKVGNG

A0A2N9IWF6 Importin N-terminal domain-containing protein9.46e-0740Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHGSPKSP-----WFHIKKFTHLFHGLTNWKVGNG
        GL I N+I +N+AL  KWL RF  E+D+LW  ++A+KY     +   G    P     W HI+K    F G   ++VGNG
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHGSPKSP-----WFHIKKFTHLFHGLTNWKVGNG

A0A2P5EL14 Uncharacterized protein (Fragment)4.46e-0739.02Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPH-----SHHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL IG ++  NKAL +KWL RF  EKD+LW  +I  KY           +   + +SPW  I K   +F+ +  +KVGNG +
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPH-----SHHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKS

A0A5A7VF18 LINE-1 retrotransposable element ORF2 protein5.43e-0942.53Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHH----------GSPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL I N+ DTN AL  KWL RF  EKDSLW  LI+VKY+      HH           + K+PW  I K    F     WK+  GK+
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHH----------GSPKSPWFHIKKFTHLFHGLTNWKVGNGKS

A0A803P8A0 Uncharacterized protein9.43e-0739.02Show/hide
Query:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEA--QFPHSHHG---SPKSPWFHIKKFTHLFHGLTNWKVGNGKS
        GL+IG +   NK L +KWL RF  E +SLW  +I  +Y     F  +  G   SP+ PW  I    H +  +  +KVGNG S
Subjt:  GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEA--QFPHSHHG---SPKSPWFHIKKFTHLFHGLTNWKVGNGKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATTGAGTATAGGAAATATTATTGACACCAATAAAGCTTTGCACATCAAGTGGTTGCGGAGATTTTTCTTTGAAAAAGACAGCTTGTGGTCATCTTTGATTGCTGTGAA
ATATGAAGCCCAGTTTCCACATTCCCACCATGGAAGTCCAAAGTCTCCATGGTTCCACATCAAGAAATTCACTCATCTTTTCCATGGTTTGACAAATTGGAAGGTGGGCA
ATGGTAAATCTTTCTTTTTTTTT
mRNA sequenceShow/hide mRNA sequence
GGATTGAGTATAGGAAATATTATTGACACCAATAAAGCTTTGCACATCAAGTGGTTGCGGAGATTTTTCTTTGAAAAAGACAGCTTGTGGTCATCTTTGATTGCTGTGAA
ATATGAAGCCCAGTTTCCACATTCCCACCATGGAAGTCCAAAGTCTCCATGGTTCCACATCAAGAAATTCACTCATCTTTTCCATGGTTTGACAAATTGGAAGGTGGGCA
ATGGTAAATCTTTCTTTTTTTTT
Protein sequenceShow/hide protein sequence
GLSIGNIIDTNKALHIKWLRRFFFEKDSLWSSLIAVKYEAQFPHSHHGSPKSPWFHIKKFTHLFHGLTNWKVGNGKSFFFF