; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0524 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0524
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDPH4 homolog
Genome locationMC04:4421938..4422407
RNA-Seq ExpressionMC04g0524
SyntenyMC04g0524
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001623 - DnaJ domain
IPR036671 - DPH-type metal-binding domain superfamily
IPR036869 - Chaperone J-domain superfamily
IPR044248 - Diphthamide biosynthesis protein 3/4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444636.1 PREDICTED: DPH4 homolog [Cucumis melo]2.14e-7572.07Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   G+IGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMC+KSHPD + G+ YFKVQKAWEV GS  SRA+YDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID
            DKG+VVELFYQCRCG   FIDSGEL+EMGYPLLRNGSKVSLRTL+ALPASVVLPCGSCSLK+ L+ID   SVSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID

XP_022144178.1 DPH4 homolog [Momordica charantia]5.08e-8580.23Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS GYG IGETYYDVLSLK DASY EIRASYRSA L+FHPDKLQAMCQKSHPD LSG+ YFKVQKAWEV GSSTSRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSID
            DKG+VVELFYQCRCG   FIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLK+RLLID SV ID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSID

XP_023001946.1 DPH4 homolog isoform X2 [Cucurbita maxima]1.50e-7573.18Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   GSIGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMCQKSHP D+ G+ YFKVQKAWEV GSS SRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID
            DKG+VVEL YQCRCG   FIDSGELEEMGYP+LR GSKVSLRTL+ALPAS+VLPCGSCSLK+RLLID    VSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID

XP_023523039.1 DPH4 homolog [Cucurbita pepo subsp. pepo]1.50e-7573.68Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   GSIGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMCQKSHPD + G+ YFKVQKAWEV GSS SRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLID
            DKG++VELFYQCRCG   FIDSGELEEMGYP+LR GSKVSLRT +ALPAS+VLPCGSCSLK+RLLID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLID

XP_038884890.1 DPH4 homolog isoform X2 [Benincasa hispida]1.53e-7774.86Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   GSIGETYYDVLSLK+DASY EIRASYRSA L+FHPDKLQAMC KSHPD ++ + YFKVQKAWEV GSS SRA+YDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID
            DKG+VVELFYQCRCG   FIDSGEL+EMGYPLLRNGSKVSLRTL+ALPASVVLPCGSCSLK+RLLID   SVSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID

TrEMBL top hitse value%identityAlignment
A0A0A0LKX8 Uncharacterized protein2.34e-7575.3Show/hide
Query:  GSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-----------------D
        GSIGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMC KSHPD + G+ YFKVQKAWEV GSS SRA+YDR LQAAK                 D
Subjt:  GSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-----------------D

Query:  KGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLID
        KG+VVEL YQCRCG   FIDSGEL+EMGYPLLRNGSKVSLRTL ALPASVVLPCGSCSLK+RLLID
Subjt:  KGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLID

A0A1S3BBM0 DPH4 homolog1.03e-7572.07Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   G+IGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMC+KSHPD + G+ YFKVQKAWEV GS  SRA+YDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID
            DKG+VVELFYQCRCG   FIDSGEL+EMGYPLLRNGSKVSLRTL+ALPASVVLPCGSCSLK+ L+ID   SVSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDL--SVSID

A0A6J1CSL8 DPH4 homolog2.46e-8580.23Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS GYG IGETYYDVLSLK DASY EIRASYRSA L+FHPDKLQAMCQKSHPD LSG+ YFKVQKAWEV GSSTSRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPD-LSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSID
            DKG+VVELFYQCRCG   FIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLK+RLLID SV ID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSID

A0A6J1KK19 DPH4 homolog isoform X27.28e-7673.18Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   GSIGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMCQKSHP D+ G+ YFKVQKAWEV GSS SRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID
            DKG+VVEL YQCRCG   FIDSGELEEMGYP+LR GSKVSLRTL+ALPAS+VLPCGSCSLK+RLLID    VSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID

A0A6J1KMK1 DPH4 homolog isoform X12.64e-7573.18Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------
        MS   GSIGETYYDVLSL++DAS+ EIRASYRSA L+FHPDKLQAMCQKSHP D+ G+ YFKVQKAWEV GSS SRAAYDR LQAAK             
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHP-DLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAK-------------

Query:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID
            DKG+VVEL YQCRCG   FIDSGELEEMGYP+LR GSKVSLRTL+ALPAS+VLPCGSCSLK+RLLID    VSID
Subjt:  ----DKGKVVELFYQCRCG--VFIDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLS--VSID

SwissProt top hitse value%identityAlignment
B1KRT1 Chaperone protein DnaJ6.0e-0538.57Show/hide
Query:  YYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFK-VQKAWEVHGSSTSRAAYDR
        YY+VLS+ +DAS  EI+ +Y+   + FHPD       ++  D + +T FK V++A+E+   S  +AAYD+
Subjt:  YYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFK-VQKAWEVHGSSTSRAAYDR

P47138 Diphthamide biosynthesis protein 44.2e-0630.1Show/hide
Query:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDRLQAAKDKGKVVELFYQCRCGVFIDSGELEE
        T+Y++L +  DA+  EI+ +YR+  L+ HPDKL    +  H  +S  T  K+Q A+++  +  +R  YDRL     K +         CG  +D   L++
Subjt:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDRLQAAKDKGKVVELFYQCRCGVFIDSGELEE

Query:  MGY
          +
Subjt:  MGY

P63036 DnaJ homolog subfamily A member 12.7e-0536.25Show/hide
Query:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG
        TYYDVL +K +A+  E++ +YR   L +HPDK        +P+  G+ + ++ +A+EV   S  R  YD+   QA K+ G
Subjt:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG

P63037 DnaJ homolog subfamily A member 12.7e-0536.25Show/hide
Query:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG
        TYYDVL +K +A+  E++ +YR   L +HPDK        +P+  G+ + ++ +A+EV   S  R  YD+   QA K+ G
Subjt:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG

Q95JF4 DnaJ homolog subfamily A member 16.0e-0535Show/hide
Query:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG
        TYYDVL +K +A+  E++ +YR   L +HPDK        +P+  G+ + ++ +A+EV   +  R  YD+   QA K+ G
Subjt:  TYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR--LQAAKDKG

Arabidopsis top hitse value%identityAlignment
AT1G56300.1 Chaperone DnaJ-domain superfamily protein1.6e-0527.85Show/hide
Query:  GYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDT---YFKVQKAWEVHGSSTSRAAYD
        G  ++  +YY +L +++DAS  +IR +YR   + +HPD+        +P ++G+    + ++Q+A+ V      R+ YD
Subjt:  GYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDT---YFKVQKAWEVHGSSTSRAAYD

AT1G72416.1 Chaperone DnaJ-domain superfamily protein3.1e-0430Show/hide
Query:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD
        E  Y VL L  + + G++R SY++  L +HPD+     +K    +    +  +Q+A+ V   S  R  YD
Subjt:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD

AT1G72416.2 Chaperone DnaJ-domain superfamily protein3.1e-0430Show/hide
Query:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD
        E  Y VL L  + + G++R SY++  L +HPD+     +K    +    +  +Q+A+ V   S  R  YD
Subjt:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD

AT1G72416.3 Chaperone DnaJ-domain superfamily protein3.1e-0430Show/hide
Query:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD
        E  Y VL L  + + G++R SY++  L +HPD+     +K    +    +  +Q+A+ V   S  R  YD
Subjt:  ETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYD

AT4G10130.1 DNAJ heat shock N-terminal domain-containing protein1.2e-3245.14Show/hide
Query:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAKD-------------
        M +G   + ETYY++LS+K+DASY EIR SYRSA L  HPDKL    + S  D   + + K+QKAWEV   +  R  YD  L++++              
Subjt:  MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDR-LQAAKD-------------

Query:  ----KGKVVELFYQCRCGVF--IDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSI
             G V++LFYQCRCG +  +DS EL  MG+ LLR+G  V ++ L A  ASVVLPCGSCSLK R+ +D  + I
Subjt:  ----KGKVVELFYQCRCGVF--IDSGELEEMGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGGGCTATGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAAGCAAGATGCTAGCTATGGCGAAATTCGAGCTAGCTACCGGTCTGCTCCCCTTAG
TTTCCATCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCCGACCTTTCAGGAGATACATATTTCAAGGTGCAGAAGGCTTGGGAAGTCCACGGCAGCTCGACAT
CTCGTGCAGCTTACGACAGACTCCAAGCTGCCAAAGATAAGGGTAAAGTTGTAGAACTCTTTTATCAGTGCAGATGCGGTGTCTTTATTGATTCTGGGGAGTTGGAGGAA
ATGGGATATCCATTGTTGAGAAATGGGAGTAAGGTTTCTTTGAGGACGCTGGAGGCTTTGCCTGCATCTGTTGTTTTGCCATGTGGTTCTTGCTCTTTGAAACTTCGTTT
GCTGATTGATTTAAGTGTTTCAATTGAT
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTGGGCTATGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAAGCAAGATGCTAGCTATGGCGAAATTCGAGCTAGCTACCGGTCTGCTCCCCTTAG
TTTCCATCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCCGACCTTTCAGGAGATACATATTTCAAGGTGCAGAAGGCTTGGGAAGTCCACGGCAGCTCGACAT
CTCGTGCAGCTTACGACAGACTCCAAGCTGCCAAAGATAAGGGTAAAGTTGTAGAACTCTTTTATCAGTGCAGATGCGGTGTCTTTATTGATTCTGGGGAGTTGGAGGAA
ATGGGATATCCATTGTTGAGAAATGGGAGTAAGGTTTCTTTGAGGACGCTGGAGGCTTTGCCTGCATCTGTTGTTTTGCCATGTGGTTCTTGCTCTTTGAAACTTCGTTT
GCTGATTGATTTAAGTGTTTCAATTGAT
Protein sequenceShow/hide protein sequence
MSLGYGSIGETYYDVLSLKQDASYGEIRASYRSAPLSFHPDKLQAMCQKSHPDLSGDTYFKVQKAWEVHGSSTSRAAYDRLQAAKDKGKVVELFYQCRCGVFIDSGELEE
MGYPLLRNGSKVSLRTLEALPASVVLPCGSCSLKLRLLIDLSVSID