; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0541 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0541
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationMC04:4678365..4682701
RNA-Seq ExpressionMC04g0541
SyntenyMC04g0541
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022450.1 hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma]1.55e-10969.5Show/hide
Query:  MGEHLLQ-PRTPSSMSPPAADRDPTA-ASGSELTRLNSGSYSSSITVDRSKDLPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK
        MG+HLL  P TPSSMSPP  DR P + +S S+LT LNS SYSSS TVDR KD PSH C   DAVQT WTDEKHRSYL SLEASFVQELHQYR L+A +SK
Subjt:  MGEHLLQ-PRTPSSMSPPAADRDPTA-ASGSELTRLNSGSYSSSITVDRSKDLPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK

Query:  QKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS
        QK R +   P+ISSSELMVLQDASWQKANIGR+DP L+R A+SPA IL+D+WIN FPSAGK C  E PDLLEE GS+SD RHLR   N    ARSSQQI 
Subjt:  QKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS

Query:  TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
            +S  I+TEVSDQNFVDN PGE+SGG+  AKRLK+A++DSS+N+QVVPYKR S ER
Subjt:  TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

XP_022135587.1 uncharacterized protein LOC111007509, partial [Momordica charantia]3.35e-10780.19Show/hide
Query:  LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSL
        LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSE+                    
Subjt:  LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSL

Query:  DRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK
                        +H  S  KQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK
Subjt:  DRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK

Query:  RATTDSSSNNQV
        RATTDSSSNNQV
Subjt:  RATTDSSSNNQV

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]1.49e-10968.99Show/hide
Query:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ
        ++   TPSSMSPP ADR+ P + S S+LTRLNS SYSSS TVD S+     +PSHHC   DAVQT WT+EKHR +LDSLEASFVQ+LH+YRHLRA +SKQ
Subjt:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ

Query:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST
        K RRK I PNISSSE MVLQDASWQKAN+GR DP LD+TA+SPA ILED+WINHFPSAG QC LE  D+LEECGS SDR H+R   N    ARSSQQI  
Subjt:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST

Query:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
           DS  I+TEVSDQNFVD HPGELS G    KRLK+A++DSS NN+V PYKRLSSER
Subjt:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

XP_023529516.1 uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]9.91e-11370.27Show/hide
Query:  MGEHLLQ-PRTPSSMSPPAADRDPTA-ASGSELTRLNSGSYSSSITVDRSKDLPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK
        MG+HLL  P TPSSMSPP  DR P + +S S+LT LNS SYSSS+TVDR KD PSH C   DAVQT WTDEKHRSYL SLEASFVQELHQYR L+A +SK
Subjt:  MGEHLLQ-PRTPSSMSPPAADRDPTA-ASGSELTRLNSGSYSSSITVDRSKDLPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK

Query:  QKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS
        QK R +   P+ISSSELMVLQDASWQKANIGR+DP L+R A+ PA IL+D+WIN FPSAGKQC  E PDLLEE GS+SDRRHLR   N    ARSSQQ+ 
Subjt:  QKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS

Query:  TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
            +S  I+TEVSDQNFVDNHPGE+SGG+ NAKRLK+A++DSS+N+QVVPYKR S ER
Subjt:  TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

XP_023553839.1 uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]9.08e-11169.38Show/hide
Query:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ
        ++   TPSSMSPP ADR+ P + S S+LTRLNS SYSSS TVD S+     +PSHHC   DAVQT WTDEKHR +LDSLEASFVQ+LH+YRHLRA +SKQ
Subjt:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ

Query:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST
        K RRK I PNISSSE +VLQDASWQKANIGR DP L +TA+SPA ILED+WINHFPSAGK C LE  D+LEECGS SDRRH+R   N C  ARSSQQI +
Subjt:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST

Query:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
           DS  I TEVSDQNFVD HPGELS G    KRLK+A++DSS N++V PYKRLSSER
Subjt:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

TrEMBL top hitse value%identityAlignment
A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X12.17e-10369.08Show/hide
Query:  TPSSMSPPAADRD---PTAASGSELTRLNSGSYSSSITVDRSKD-LPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQ
        TPS +S P ADR    P A+S ++ T  NS S+SSSITVD SK  L SHHC   DA QT WTDEKHRSYLDSLEASFVQ LHQ+R + A +SKQK RRK 
Subjt:  TPSSMSPPAADRD---PTAASGSELTRLNSGSYSSSITVDRSKD-LPSHHCP--DAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQ

Query:  ITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSV
        I  + SSSELMVLQDASWQKANIGR+DP LD+TA+SPA ILEDLWINHFPSAGKQC+LE PDLLEECGS SDRRH+R+M N CG AR+SQQ      +S 
Subjt:  ITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSV

Query:  AILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLS
         I+TEVSDQNFVDN PGELSGG+  AKRLK+A++    N QVVP+KRLS
Subjt:  AILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLS

A0A6J1C346 uncharacterized protein LOC1110075091.62e-10780.19Show/hide
Query:  LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSL
        LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSE+                    
Subjt:  LNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSL

Query:  DRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK
                        +H  S  KQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK
Subjt:  DRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLK

Query:  RATTDSSSNNQV
        RATTDSSSNNQV
Subjt:  RATTDSSSNNQV

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X27.23e-11068.99Show/hide
Query:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ
        ++   TPSSMSPP ADR+ P + S S+LTRLNS SYSSS TVD S+     +PSHHC   DAVQT WT+EKHR +LDSLEASFVQ+LH+YRHLRA +SKQ
Subjt:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ

Query:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST
        K RRK I PNISSSE MVLQDASWQKAN+GR DP LD+TA+SPA ILED+WINHFPSAG QC LE  D+LEECGS SDR H+R   N    ARSSQQI  
Subjt:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST

Query:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
           DS  I+TEVSDQNFVD HPGELS G    KRLK+A++DSS NN+V PYKRLSSER
Subjt:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X15.54e-10368.15Show/hide
Query:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ
        ++   TPSSMSPP ADR+ P + S S+LTRLNS SYSSS TVD S+     +PSHHC   DAVQT WT+EKHR +LDSLEASFVQ+LH+YRHLRA +SKQ
Subjt:  LLQPRTPSSMSPPAADRD-PTAASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ

Query:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST
        K RRK I PNISSSE MVLQDASWQKAN+GR DP LD+TA+SPA ILED+WINHFPSAG QC LE  D+LEECGS SDR H+R   N    ARSSQQI  
Subjt:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST

Query:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQV
           DS  I+TEVSDQNFVD HPGELS G    KRLK+A++DSS NN+V
Subjt:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQV

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X29.20e-10667.44Show/hide
Query:  LLQPRTPSSMSPPAADRDPT-AASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ
        ++   TPSSMSPP ADR+ + + S S+LTRLNS SYSSS TVD S+     +PSHHC   DAVQT WTDEKHR +LD+LEASFVQ+LH+YRHLRA +SKQ
Subjt:  LLQPRTPSSMSPPAADRDPT-AASGSELTRLNSGSYSSSITVDRSKD----LPSHHC--PDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQ

Query:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST
        K RRK I PNISSSE MVLQDASWQKANIGR DP L +TA+SPA ILED+WINHFPSAG Q   E  D+LEECGS SDR H+R   N C  ARSSQQI  
Subjt:  KTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIST

Query:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER
           DS  I+ EVSDQNFVD HPGELSGG    KRLK+A++DS  N++V PYKRLSSER
Subjt:  RSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 273.5e-1030.3Show/hide
Query:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK
        ++T WT+EKH  YL S+EASFV +L+     L  + +  ++ R       S  +  VL D  WQK N+ + +  ++ R   +    L   WI H+    K
Subjt:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK

Query:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL
            + P   E         + +      G A S +Q+S+ S D   I     EVSDQNFV+     + G   ++K++K    ++SSS +QVVP  +L
Subjt:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL

Q8L983 Cold-regulated protein 287.3e-0835.83Show/hide
Query:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ
        DRD + AS  S+     S S  S +T + S+        +   T WT+EKH SYLD LE+SFV++L  Y  L   T +  +TR  Q   + S+ +  VLQ
Subjt:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ

Query:  DASWQKANIGRDDPSLDRTA
        +  WQK N G+    L+ ++
Subjt:  DASWQKANIGRDDPSLDRTA

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)5.2e-0935.83Show/hide
Query:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ
        DRD + AS  S+     S S  S +T + S+        +   T WT+EKH SYLD LE+SFV++L  Y  L   T +  +TR  Q   + S+ +  VLQ
Subjt:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ

Query:  DASWQKANIGRDDPSLDRTA
        +  WQK N G+    L+ ++
Subjt:  DASWQKANIGRDDPSLDRTA

AT4G33980.2 FUNCTIONS IN: molecular_function unknown5.2e-0935.83Show/hide
Query:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ
        DRD + AS  S+     S S  S +T + S+        +   T WT+EKH SYLD LE+SFV++L  Y  L   T +  +TR  Q   + S+ +  VLQ
Subjt:  DRDPTAASG-SELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSK-QKTRRKQITPNISSSELMVLQ

Query:  DASWQKANIGRDDPSLDRTA
        +  WQK N G+    L+ ++
Subjt:  DASWQKANIGRDDPSLDRTA

AT5G42900.1 cold regulated gene 272.5e-1130.3Show/hide
Query:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK
        ++T WT+EKH  YL S+EASFV +L+     L  + +  ++ R       S  +  VL D  WQK N+ + +  ++ R   +    L   WI H+    K
Subjt:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK

Query:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL
            + P   E         + +      G A S +Q+S+ S D   I     EVSDQNFV+     + G   ++K++K    ++SSS +QVVP  +L
Subjt:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL

AT5G42900.2 cold regulated gene 272.5e-1130.3Show/hide
Query:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK
        ++T WT+EKH  YL S+EASFV +L+     L  + +  ++ R       S  +  VL D  WQK N+ + +  ++ R   +    L   WI H+    K
Subjt:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK

Query:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL
            + P   E         + +      G A S +Q+S+ S D   I     EVSDQNFV+     + G   ++K++K    ++SSS +QVVP  +L
Subjt:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAIL---TEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL

AT5G42900.3 cold regulated gene 273.8e-1229.95Show/hide
Query:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK
        ++T WT+EKH  YL S+EASFV +L+     L  + +  ++ R       S  +  VL D  WQK N+ + +  ++ R   +    L   WI H+    K
Subjt:  VQTVWTDEKHRSYLDSLEASFVQELH-QYRHLRASTSKQKTRRKQITPNISSSELMVLQDASWQKANIGRDDPSLD-RTANSPAAILEDLWINHFPSAGK

Query:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS--TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL
            + P   E         + +      G A S +Q+S  +R  D +++  EVSDQNFV+     + G   ++K++K    ++SSS +QVVP  +L
Subjt:  QCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQIS--TRSGDSVAILTEVSDQNFVDNHPGELSGGISNAKRLKRA-TTDSSSNNQVVPYKRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGCATCTGCTGCAGCCTCGTACTCCGTCGTCGATGTCGCCGCCGGCCGCAGATCGAGACCCAACGGCGGCCTCTGGCAGCGAGTTGACTCGCTTGAACTCCGG
CTCCTACTCTTCTTCCATTACTGTTGATAGGTCCAAGGATTTGCCTTCTCATCATTGTCCGGATGCGGTGCAAACAGTTTGGACAGATGAGAAGCACAGATCATATCTTG
ATTCTTTAGAAGCATCTTTTGTCCAAGAGTTGCATCAATATAGGCACTTGCGTGCTTCGACCTCGAAACAGAAAACACGTAGGAAGCAGATCACGCCTAATATATCTTCT
TCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGGATGATCCTTCATTGGATAGGACTGCCAATTCCCCTGCTGCTATTTTAGAGGATCT
TTGGATAAATCATTTTCCTTCTGCAGGAAAACAATGTAATCTGGAAGCACCTGATCTCCTTGAAGAATGTGGAAGTTATAGTGATAGGAGACACTTAAGGTACATGGCAA
ACCCCTGTGGATTTGCAAGAAGTTCACAGCAGATCTCTACACGCAGTGGTGATTCTGTTGCAATTCTTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATCCAGGA
GAGTTGTCTGGTGGCATATCTAATGCAAAAAGGTTAAAGAGAGCTACTACTGATTCTTCGAGCAACAACCAAGTTGTACCATATAAGAGATTATCATCGGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
GGCTGTCGTAGACACGCGCCCTAAAATATCGGGTTGGCGCGTGGAGAGAGTAGCCGATAAAAATATCTGGCTGACATTGGCCGCAGATATTTATATCCAGGATGACGTGG
CAATCGGCTGACGCTTTTTACACGTGTAAAAGCGTCGCCATGTGGAGCCTTAATTGGCATTCGCCCCCAAAAACCACCATTCACCGCTTCTCTCTCTCTCTCTTCAATTC
TGCACGAGCCTGAATCCCGAGAGGGTTTCGGAGCTAAATTTTCGCCACGATTCTGTTTCTTCTCTCTTTTGTTTGATTTGATTTGATTTTCTGTATTTGCTGAGACGGAC
GAATTCGCGTTGCGTTCGATCGAAGAAAATGGGGGAGCATCTGCTGCAGCCTCGTACTCCGTCGTCGATGTCGCCGCCGGCCGCAGATCGAGACCCAACGGCGGCCTCTG
GCAGCGAGTTGACTCGCTTGAACTCCGGCTCCTACTCTTCTTCCATTACTGTTGATAGGTCCAAGGATTTGCCTTCTCATCATTGTCCGGATGCGGTGCAAACAGTTTGG
ACAGATGAGAAGCACAGATCATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGAGTTGCATCAATATAGGCACTTGCGTGCTTCGACCTCGAAACAGAAAACACGTAG
GAAGCAGATCACGCCTAATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGGATGATCCTTCATTGGATAGGACTGCCA
ATTCCCCTGCTGCTATTTTAGAGGATCTTTGGATAAATCATTTTCCTTCTGCAGGAAAACAATGTAATCTGGAAGCACCTGATCTCCTTGAAGAATGTGGAAGTTATAGT
GATAGGAGACACTTAAGGTACATGGCAAACCCCTGTGGATTTGCAAGAAGTTCACAGCAGATCTCTACACGCAGTGGTGATTCTGTTGCAATTCTTACAGAAGTTTCAGA
TCAAAACTTTGTGGATAATCATCCAGGAGAGTTGTCTGGTGGCATATCTAATGCAAAAAGGTTAAAGAGAGCTACTACTGATTCTTCGAGCAACAACCAAGTTGTACCAT
ATAAGAGATTATCATCGGAAAGATAAGAGCCAAATGTCTGTCTTCACAACACCCTCAGAACTCTGTGCCTCCAACTTCAGACTTGTGGTACTATATAAGAAGGAGTTGAC
AACATCCGTTCCAACACGTGAAAACATTGGCTTTTCATGCTAGCAACCAAATGCGACACGACACGGTTTTGTTTTACGTTCAAAGAGCATTGTAAAGAAACTGAATAAGT
AATCATTGGAGGTCAAGCACGTCAGGAACTGGTGCTTTCCAAGTTTAGAGAGTGGCTTGTGGAAAGGATTTGACAGCAACAATTCTTGACCAGAAGATCCGCGGCAGGAA
GGAGAAAATATGTTTGTGTATGGTACAAACTAAACTTTTTTCCCAGTTCAAGTATCTATTGAGTGAAATATATGCCAACCTTTTCTTCTTTTCTCATGTTCTTTTTCTTA
GAGGCTCAAAAGTGGGAATTCTAATAGATGTAGGATCTGATTATACATGTTATAGAGAATCTAGGCACCCTGATACTGAGATAGATACACACTTTTTCAATTTGTTTTAA
ATACTCTCTCATTCTGAAGCTCTGTTAGAAACCTCAAGTGTAAATTATTTCATAAAACAAAGTGCTATTATTTTGTGATACTGAAAAAGAATTGAACAAAC
Protein sequenceShow/hide protein sequence
MGEHLLQPRTPSSMSPPAADRDPTAASGSELTRLNSGSYSSSITVDRSKDLPSHHCPDAVQTVWTDEKHRSYLDSLEASFVQELHQYRHLRASTSKQKTRRKQITPNISS
SELMVLQDASWQKANIGRDDPSLDRTANSPAAILEDLWINHFPSAGKQCNLEAPDLLEECGSYSDRRHLRYMANPCGFARSSQQISTRSGDSVAILTEVSDQNFVDNHPG
ELSGGISNAKRLKRATTDSSSNNQVVPYKRLSSER