CuGenDBv2

Gene ID	MC04g0549
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	30S ribosomal protein S7, chloroplastic
Genome location	MC04:4759240..4759404
RNA-Seq Expression	MC04g0549
Synteny	MC04g0549
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AEK78210.1 ribosomal protein S7, partial [Claytonia virginica]

6.86e-18

89.36

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

QGA86573.1 ribosomal protein S7, partial [Pithecellobium dulce]

1.15e-17

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

TVU58068.1 30S ribosomal protein S7, partial [Cobetia crustatorum]

1.09e-17

85.11

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVP+E+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

TYJ34178.1 hypothetical protein E1A91_A05G151100v1, partial [Gossypium mustelinum]

6.89e-18

85.71

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Query:  PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        P KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+  T
Subjt:  PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

YP_009940001.1 ribosomal protein S7 [Phalaenopsis mannii]

1.15e-17

89.36

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

TrEMBL top hits

e value

%identity

Alignment

A0A558GML5 30S ribosomal protein S7 (Fragment)

5.29e-18

85.11

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVP+E+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

A0A5D2Z653 Ribosomal_S7 domain-containing protein (Fragment)

3.33e-18

85.71

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Query:  PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        P KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+  T
Subjt:  PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

A0A5Q0UYG2 Ribosomal protein S7 (Fragment)

5.55e-18

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

A0A7L7SIW6 30S ribosomal protein S7, chloroplastic

5.56e-18

89.36

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

G0YEF1 Ribosomal protein S7 (Fragment)

3.32e-18

89.36

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

SwissProt top hits

e value

%identity

Alignment

A4QJG0 30S ribosomal protein S7, chloroplastic

8.6e-15

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

A4QJP4 30S ribosomal protein S7, chloroplastic

8.6e-15

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

A4QK64 30S ribosomal protein S7, chloroplastic

8.6e-15

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

Q67IL8 30S ribosomal protein S7, chloroplastic

8.6e-15

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

Q9GE26 30S ribosomal protein S7, chloroplastic

8.6e-15

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00900.1 Ribosomal protein S7p/S5e family protein

6.1e-16

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

ATCG01240.1 ribosomal protein S7

6.1e-16

87.23

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

Sequences

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CDS sequence

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AGTGTGAGCTGGGAGTTGCCCCAGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCTCGATATAGCAGTAAA
GGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATGCCGACCACT

mRNA sequence

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AGTGTGAGCTGGGAGTTGCCCCAGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCTCGATATAGCAGTAAA
GGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATGCCGACCACT

Protein sequence

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SVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT

MC04g0549 (gene) of Bitter gourd (Dali-11) v1 genome