; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0587 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0587
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGRF-type domain-containing protein
Genome locationMC04:5187465..5191080
RNA-Seq ExpressionMC04g0587
SyntenyMC04g0587
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010666 - Zinc finger, GRF-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645848.1 hypothetical protein Csa_017077 [Cucumis sativus]9.63e-7172.11Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVI
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ + I
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVI

KAF2294607.1 hypothetical protein GH714_013386 [Hevea brasiliensis]7.22e-6157.86Show/hide
Query:  HSQDPYLKIMSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEK
        HS   Y ++       E+SE+ C CGLPAKLR SQTP+NPFRLFYNCP+  + QCGFF W DEP P+ DRH +E+NLIRN C  LQ RLDEIE+ H+N++
Subjt:  HSQDPYLKIMSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEK

Query:  AEWERDKEELTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        + WER+K EL L+L T+Q++LD+I+ R+R  NES  MPPLD L I DDEGDD + I+T+
Subjt:  AEWERDKEELTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

XP_004136954.1 uncharacterized protein LOC101219463 [Cucumis sativus]3.71e-7674Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

XP_008455003.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo]5.45e-7674.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIRDD+  +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL

XP_022148840.1 uncharacterized protein LOC111017399 [Momordica charantia]1.51e-105100Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

TrEMBL top hitse value%identityAlignment
A0A0A0K2H6 GRF-type domain-containing protein1.80e-7674Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

A0A1S4E0B8 uncharacterized protein LOC1034952842.64e-7674.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIRDD+  +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL

A0A5A7SJM5 GRF-type domain-containing protein2.64e-7674.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIRDD+  +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDE-GDDALVIYTL

A0A6A6L1L0 GRF-type domain-containing protein3.49e-6157.86Show/hide
Query:  HSQDPYLKIMSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEK
        HS   Y ++       E+SE+ C CGLPAKLR SQTP+NPFRLFYNCP+  + QCGFF W DEP P+ DRH +E+NLIRN C  LQ RLDEIE+ H+N++
Subjt:  HSQDPYLKIMSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEK

Query:  AEWERDKEELTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        + WER+K EL L+L T+Q++LD+I+ R+R  NES  MPPLD L I DDEGDD + I+T+
Subjt:  AEWERDKEELTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

A0A6J1D427 uncharacterized protein LOC1110173997.29e-106100Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54930.1 GRF zinc finger / Zinc knuckle protein4.1e-0442.22Show/hide
Query:  ELECYCGL-PAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADE
        ++ C C   P    TS+T KNP R FY CP      CG+F W D+
Subjt:  ELECYCGL-PAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADE

AT3G42860.1 zinc knuckle (CCHC-type) family protein4.4e-0648Show/hide
Query:  ELECYCGLP-AKLRTSQTPKNPFRLFYNCP-KEISQQCGFFHWADEPEPS
        E  C CG+    + TS TPKNP R FY CP +E +  CGFF W D  + S
Subjt:  ELECYCGLP-AKLRTSQTPKNPFRLFYNCP-KEISQQCGFFHWADEPEPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATTGTCAAAAAGAAAAAGAGAAATTCACTCCAAAAGAAATTCAGAGCAATCTCTTCGTTTATGGACACTCGTCGTTCGCTGTATCAATATTCAATGCGACGGTGATCT
TTCTTTCCTCTTTCAATCGGTTGCTCCAAATTACTTACAACATTCTCAGGATCCATACTTGAAAATAATGTCTACTTCGGAAATTTTTGAAGAATCTGAACTAGAATGTT
ACTGTGGACTGCCTGCAAAACTGAGAACATCTCAGACACCCAAAAATCCATTCAGATTATTCTACAACTGTCCAAAGGAAATATCTCAACAATGTGGTTTTTTTCATTGG
GCTGATGAACCCGAACCATCTGATGATAGACATGTTGAGGAACTAAACTTAATCCGTAATGTGTGCCTTCATCTACAAGATAGATTAGACGAAATCGAAGAGGAACATGA
TAATGAGAAAGCTGAGTGGGAAAGGGACAAAGAAGAGCTAACATTGCAACTAGTAACGCTGCAATCTCAGCTTGATGATATTCAGCATAGAATAAGGATGGCAAATGAAT
CTTTTTCAATGCCTCCCTTGGATGCACTTTCCATTAGGGATGACGAGGGTGACGATGCATTAGTTATATATACTTTGTAA
mRNA sequenceShow/hide mRNA sequence
GGTCATTGTCAAAAAGAAAAAGAGAAATTCACTCCAAAAGAAATTCAGAGCAATCTCTTCGTTTATGGACACTCGTCGTTCGCTGTATCAATATTCAATGCGACGGTGAT
CTTTCTTTCCTCTTTCAATCGGTTGCTCCAAATTACTTACAACATTCTCAGGATCCATACTTGAAAATAATGTCTACTTCGGAAATTTTTGAAGAATCTGAACTAGAATG
TTACTGTGGACTGCCTGCAAAACTGAGAACATCTCAGACACCCAAAAATCCATTCAGATTATTCTACAACTGTCCAAAGGAAATATCTCAACAATGTGGTTTTTTTCATT
GGGCTGATGAACCCGAACCATCTGATGATAGACATGTTGAGGAACTAAACTTAATCCGTAATGTGTGCCTTCATCTACAAGATAGATTAGACGAAATCGAAGAGGAACAT
GATAATGAGAAAGCTGAGTGGGAAAGGGACAAAGAAGAGCTAACATTGCAACTAGTAACGCTGCAATCTCAGCTTGATGATATTCAGCATAGAATAAGGATGGCAAATGA
ATCTTTTTCAATGCCTCCCTTGGATGCACTTTCCATTAGGGATGACGAGGGTGACGATGCATTAGTTATATATACTTTGTAAATAAATAGATCATTGTAAATTATACTGC
TGAGTGAAGTGAGAGATTATATCGAAATTTAAGCTATAGGTTTTTGGGGCATGTTTGATGTTTGAGCTTCTGTTTAAAAGAGATATATGGTTGTCCATTCATTTTCTTCT
TAAATTTAATATCTATCCAATGTTTATGAGAGGATACTAGGGGTGAGCATCAGTTTGGTTTTCTCGGTTTTTGCTTAAA
Protein sequenceShow/hide protein sequence
SLSKRKREIHSKRNSEQSLRLWTLVVRCINIQCDGDLSFLFQSVAPNYLQHSQDPYLKIMSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHW
ADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL