CuGenDBv2

Gene ID	MC04g0594
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Gibberellin regulated protein
Genome location	MC04:5232091..5232267
RNA-Seq Expression	MC04g0594
Synteny	MC04g0594
Gene Ontology terms	NA
InterPro domains	IPR003854 - Gibberellin regulated protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044354.1 peamaclein-like [Cucumis melo var. makuwa]

5.26e-20

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C + C+KRCSRAG+K RCMKYC +CCG CKCVPS G YG +H CPCY  + + KGR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

KAE8649034.1 hypothetical protein Csa_014887 [Cucumis sativus]

6.12e-19

61.67

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C + C+KRCS+AG+K RC+KYC +CCG CKCVPS G YG +H CPCY  + + KGR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]

1.01e-29

77.97

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        CTRPCRKRCS A LKR+CMK+CR+CCGKCKCVP  GAYG+ HCPCYSH+HT +GR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]

1.81e-29

77.97

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        CTRPCRKRCS A LKR+CMK+CR+CCGKCKCVP  GAYG+ HCPCYSH+HT +GR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

XP_016499410.1 PREDICTED: peamaclein-like [Nicotiana tabacum]

6.12e-19

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C R C+ RCS+AG+K RC+KYC LCC KCKCVP+ G YG +H CPCY  +  +KG+ KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2Z1 Uncharacterized protein

1.24e-29

77.97

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        CTRPCRKRCS+A LKRRCMKYCR+CC KCKCVP  G YG+ HCPCYSH+HT +GR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

A0A1S4CE27 peamaclein-like

2.96e-19

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C R C+ RCS+AG+K RC+KYC LCC KCKCVP+ G YG +H CPCY  +  +KG+ KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

A0A5D3E0A6 Peamaclein-like

2.54e-20

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C + C+KRCSRAG+K RCMKYC +CCG CKCVPS G YG +H CPCY  + + KGR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

A0A6P6W5J7 peamaclein-like

2.96e-19

54.24

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        CTR C+ RC++AG++ RC++YC++CCGKCKCVPS     +H CPCY  +   KG+ KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

C6SVU2 Uncharacterized protein

5.82e-19

61.67

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C+  C KRCSRAG+K RCMK+C +CCGKC CVPS G YG +H CPCY  +   KG+ KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

SwissProt top hits

e value

%identity

Alignment

C0HLQ0 Cypmaclein

1.1e-10

47.46

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        C + C +RCS+A    RC+KYC +CC KC CVP   A     CPCY+++   KG  KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

C0HLQ1 Cypmaclein

1.4e-10

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRH-HCPCYSHIHTYKGRTKCP
        C + C +RCS+A    RC+KYC +CC KC CVP  G YG    CPCY+++   KG  KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRH-HCPCYSHIHTYKGRTKCP

C0HLQ2 Cypmaclein

1.1e-10

47.46

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        C + C +RCS+A    RC+KYC +CC KC CVP   A     CPCY+++   KG  KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

P86888 Peamaclein

2.1e-11

53.33

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C   C  RCS+AG + RC+KYC +CC KC CVPS G YG +  CPCY  +   KG  KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

Q948Z4 Snakin-1

3.9e-13

56.67

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C   C+ RCS+AGL  RC+KYC +CC +CKCVPS G YG +H CPCY      KG++KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

Arabidopsis top hits

e value

%identity

Alignment

AT2G14900.1 Gibberellin-regulated family protein

1.3e-11

51.67

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C + C  RC  AG+K RC+KYC +CC  C+CVPS G YG +H C CY    + KG  KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

AT2G39540.1 Gibberellin-regulated family protein

2.2e-11

47.46

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        C   C  RCS+AG    C+KYC +CC KC CVPS     +  CPCY  +   KG +KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

AT4G09600.1 GAST1 protein homolog 3

1.6e-09

44.07

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        C   C+ RCS++     C++ C  CC +C CVP   A   H CPCY+ I T  GR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

AT4G09610.1 GAST1 protein homolog 2

3.2e-10

42.37

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP
        C   C+ RCS++   + C++ C  CC +C CVP   +   H CPCY+ I T+ GR KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

AT5G59845.1 Gibberellin-regulated family protein

3.7e-11

52.46

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Query:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCK-CVPSAGAYG-RHHCPCYSHIHTYKGRTKCP
        C   C  RCS+AG + RC+KYC +CC KC  CVPS G YG +  CPCY  +   KG +KCP
Subjt:  CTRPCRKRCSRAGLKRRCMKYCRLCCGKCK-CVPSAGAYG-RHHCPCYSHIHTYKGRTKCP

Sequences

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CDS sequence

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TGCACGAGGCCGTGTCGAAAGAGGTGCTCGCGAGCGGGGCTAAAGCGTCGGTGCATGAAGTACTGCAGACTGTGCTGCGGCAAATGCAAGTGCGTTCCCAGCGCTGGGGC
TTACGGCAGGCACCACTGCCCTTGCTACAGCCACATCCACACCTATAAGGGCAGGACCAAGTGCCCT

mRNA sequence

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TGCACGAGGCCGTGTCGAAAGAGGTGCTCGCGAGCGGGGCTAAAGCGTCGGTGCATGAAGTACTGCAGACTGTGCTGCGGCAAATGCAAGTGCGTTCCCAGCGCTGGGGC
TTACGGCAGGCACCACTGCCCTTGCTACAGCCACATCCACACCTATAAGGGCAGGACCAAGTGCCCT

Protein sequence

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CTRPCRKRCSRAGLKRRCMKYCRLCCGKCKCVPSAGAYGRHHCPCYSHIHTYKGRTKCP

MC04g0594 (gene) of Bitter gourd (Dali-11) v1 genome