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MC04g0608 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0608
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 8 isoform X2
Genome locationMC04:5379822..5380039
RNA-Seq ExpressionMC04g0608
SyntenyMC04g0608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]1.96e-0438.24Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEA
        P ++W    KA+  E+W+ERNQR    KA +  + I + A   A+ WC+L   F +YS+  IC+N  A
Subjt:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEA

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]1.14e-0544.62Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTLKALEDHQL-IFNLAKFKAS-QWCALSGFFSSYSLSMICIN
        P L+W+N  KA+ SELW ERNQ      E  +L I   AK  A   WC+L+  F  YS+  IC+N
Subjt:  PNLLWVNGLKAIFSELWLERNQRTLKALEDHQL-IFNLAKFKAS-QWCALSGFFSSYSLSMICIN

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]1.42e-0437.68Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF
        P ++W    KA+  E+W+ERNQR    KA +  + I + A   A+ WC+L   F +YS+  IC+N   F
Subjt:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]4.70e-0749.25Show/hide
Query:  LWVNGLKAIFSELWLERNQRTLKALEDHQLI---FNLAKFKASQWCALSGFFSSYSLSMICINGEAF
        LW+N +KA+ SELW ERN R  +  E  +L    F  AKFKAS WC+L   F  +S SMI  N  AF
Subjt:  LWVNGLKAIFSELWLERNQRTLKALEDHQLI---FNLAKFKASQWCALSGFFSSYSLSMICINGEAF

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]8.98e-0746.48Show/hide
Query:  LLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF-TTP
        LLW N +KA+ ++LW ERNQR    KA      +   A+ +AS WC LS  F +YSLS   +N EAF +TP
Subjt:  LLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF-TTP

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein9.51e-0538.24Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEA
        P ++W    KA+  E+W+ERNQR    KA +  + I + A   A+ WC+L   F +YS+  IC+N  A
Subjt:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEA

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X25.50e-0644.62Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTLKALEDHQL-IFNLAKFKAS-QWCALSGFFSSYSLSMICIN
        P L+W+N  KA+ SELW ERNQ      E  +L I   AK  A   WC+L+  F  YS+  IC+N
Subjt:  PNLLWVNGLKAIFSELWLERNQRTLKALEDHQL-IFNLAKFKAS-QWCALSGFFSSYSLSMICIN

A0A5D3DE60 zf-RVT domain-containing protein6.89e-0537.68Show/hide
Query:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF
        P ++W    KA+  E+W+ERNQR    KA +  + I + A   A+ WC+L   F +YS+  IC+N   F
Subjt:  PNLLWVNGLKAIFSELWLERNQRTL--KALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAF

A0A6J1DIE2 uncharacterized protein LOC1110207652.28e-0749.25Show/hide
Query:  LWVNGLKAIFSELWLERNQRTLKALEDHQLI---FNLAKFKASQWCALSGFFSSYSLSMICINGEAF
        LW+N +KA+ SELW ERN R  +  E  +L    F  AKFKAS WC+L   F  +S SMI  N  AF
Subjt:  LWVNGLKAIFSELWLERNQRTLKALEDHQLI---FNLAKFKASQWCALSGFFSSYSLSMICINGEAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTACCCTAATTTATTATGGGTCAACGGCCTCAAAGCTATTTTTTCAGAATTATGGTTGGAAAGAAACCAAAGGACTTTGAAGGCTCTCGAAGATCATCAATTGATTTT
CAACCTAGCTAAGTTCAAAGCCTCTCAATGGTGTGCTCTTTCCGGTTTCTTTTCTTCGTATTCTCTTAGCATGATTTGTATAAACGGGGAGGCTTTTACAACTCCC
mRNA sequenceShow/hide mRNA sequence
TTGTACCCTAATTTATTATGGGTCAACGGCCTCAAAGCTATTTTTTCAGAATTATGGTTGGAAAGAAACCAAAGGACTTTGAAGGCTCTCGAAGATCATCAATTGATTTT
CAACCTAGCTAAGTTCAAAGCCTCTCAATGGTGTGCTCTTTCCGGTTTCTTTTCTTCGTATTCTCTTAGCATGATTTGTATAAACGGGGAGGCTTTTACAACTCCC
Protein sequenceShow/hide protein sequence
LYPNLLWVNGLKAIFSELWLERNQRTLKALEDHQLIFNLAKFKASQWCALSGFFSSYSLSMICINGEAFTTP