; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0629 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0629
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC04:5712246..5712640
RNA-Seq ExpressionMC04g0629
SyntenyMC04g0629
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.60e-2143.8Show/hide
Query:  LQSFELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---
        L  FE +  L +NL K +    N+S     + A  W I + SLPL YL +PLGGNP+   FW  + E+I++K  +WK++ ISK G LTLI+ST++ +   
Subjt:  LQSFELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---

Query:  LLSVFKASVKVCKSIEKLTRN
         LSVF+A    CK+IEK  RN
Subjt:  LLSVFKASVKVCKSIEKLTRN

TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.63e-2143.22Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F+L+  L++NL+K + S  N+      Q A  W I T  LP+ YL +PLGG     +FW+ + E+I +K  SWK+S +SK G +TLI+S++A +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FKA V  CK+IEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

TYK10356.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.56e-2146.61Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F+L+  LN+NL+K + S  NI      Q A  W I T   P+ YL +PLGG P   +FW+ I E+I +K  SWK+S +SK G +TLI+ST+A +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FKA V   KSIEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

TYK15315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.24e-2143.22Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        FE +  L +NL K +    N+S +   + A  W I   SLPL YL +PLGGNP+ + FW  + ++I++K  +WK+  ISK G LTLI+ST++ +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        VF+A   +CK+IEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

XP_022143310.1 uncharacterized protein LOC111013210 [Momordica charantia]5.85e-2245.76Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F L++D    + + +++   I  + L   A+IW  P +SL + YL MPLGGNP+   FW+PIIER  RK ESWK+S ISK G LTLIQS ++ +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FK+ ++V K++EKL R+
Subjt:  VFKASVKVCKSIEKLTRN

TrEMBL top hitse value%identityAlignment
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein4.16e-2143.8Show/hide
Query:  LQSFELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---
        L  FE +  L +NL K +    N+S     + A  W I + SLPL YL +PLGGNP+   FW  + E+I++K  +WK++ ISK G LTLI+ST++ +   
Subjt:  LQSFELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---

Query:  LLSVFKASVKVCKSIEKLTRN
         LSVF+A    CK+IEK  RN
Subjt:  LLSVFKASVKVCKSIEKLTRN

A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein4.18e-2143.22Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F+L+  L++NL+K + S  N+      Q A  W I T  LP+ YL +PLGG     +FW+ + E+I +K  SWK+S +SK G +TLI+S++A +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FKA V  CK+IEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

A0A5D3CJ08 LINE-1 retrotransposable element ORF2 protein2.21e-2146.61Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F+L+  LN+NL+K + S  NI      Q A  W I T   P+ YL +PLGG P   +FW+ I E+I +K  SWK+S +SK G +TLI+ST+A +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FKA V   KSIEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

A0A5D3CUY8 LINE-1 retrotransposable element ORF2 protein3.51e-2143.22Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        FE +  L +NL K +    N+S +   + A  W I   SLPL YL +PLGGNP+ + FW  + ++I++K  +WK+  ISK G LTLI+ST++ +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        VF+A   +CK+IEK  RN
Subjt:  VFKASVKVCKSIEKLTRN

A0A6J1CNG6 uncharacterized protein LOC1110132102.83e-2245.76Show/hide
Query:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS
        F L++D    + + +++   I  + L   A+IW  P +SL + YL MPLGGNP+   FW+PIIER  RK ESWK+S ISK G LTLIQS ++ +    LS
Subjt:  FELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACI---LLS

Query:  VFKASVKVCKSIEKLTRN
        +FK+ ++V K++EKL R+
Subjt:  VFKASVKVCKSIEKLTRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACTAAACTTTGTAATCTTTATGGGCTGGTTACAATCCTTTGAGCTTTCGTTGGATCTCAACATGAATCTGCATAAGCCATCATTTTCTGGTTTTAACATTTCCAACGA
TTACCTTCTGCAGCGAGCTCAGATTTGGAGTATCCCTACTGTCTCACTTCCCTTATTCTATCTTAACATGCCTCTGGGTGGGAATCCTCGATGTGACTCTTTTTGGGAAC
CTATCATTGAAAGAATTCGTAGAAAGTTTGAAAGCTGGAAGTTTTCATACATTTCGAAATGGGGTTGGCTCACTCTCATTCAATCGACTGTTGCCTGCATATTATTGTCC
GTCTTTAAAGCCTCTGTTAAAGTTTGTAAGAGTATTGAGAAATTGACGAGGAATTTA
mRNA sequenceShow/hide mRNA sequence
TTACTAAACTTTGTAATCTTTATGGGCTGGTTACAATCCTTTGAGCTTTCGTTGGATCTCAACATGAATCTGCATAAGCCATCATTTTCTGGTTTTAACATTTCCAACGA
TTACCTTCTGCAGCGAGCTCAGATTTGGAGTATCCCTACTGTCTCACTTCCCTTATTCTATCTTAACATGCCTCTGGGTGGGAATCCTCGATGTGACTCTTTTTGGGAAC
CTATCATTGAAAGAATTCGTAGAAAGTTTGAAAGCTGGAAGTTTTCATACATTTCGAAATGGGGTTGGCTCACTCTCATTCAATCGACTGTTGCCTGCATATTATTGTCC
GTCTTTAAAGCCTCTGTTAAAGTTTGTAAGAGTATTGAGAAATTGACGAGGAATTTA
Protein sequenceShow/hide protein sequence
LLNFVIFMGWLQSFELSLDLNMNLHKPSFSGFNISNDYLLQRAQIWSIPTVSLPLFYLNMPLGGNPRCDSFWEPIIERIRRKFESWKFSYISKWGWLTLIQSTVACILLS
VFKASVKVCKSIEKLTRNL