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MC04g0733 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0733
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionpolygalacturonase-like
Genome locationMC04:8159080..8159190
RNA-Seq ExpressionMC04g0733
SyntenyMC04g0733
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068064.1 polygalacturonase [Cucumis melo var. makuwa]4.02e-0769.7Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        E+V+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
XP_008460449.1 PREDICTED: polygalacturonase-like [Cucumis melo]3.59e-0769.7Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        E+V+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
XP_011652823.2 polygalacturonase [Cucumis sativus]1.15e-0764.86Show/hide
Query:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        ++  E+VKLTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
XP_011652824.2 polygalacturonase [Cucumis sativus]2.94e-0762.16Show/hide
Query:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        ++  ++VKLTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
XP_038888714.1 polygalacturonase-like [Benincasa hispida]6.11e-0864.86Show/hide
Query:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        ++  EDV+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
TrEMBL top hitse value%identityAlignment
A0A0A0LCF2 Uncharacterized protein1.33e-0864.86Show/hide
Query:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        ++  E+VKLTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
A0A1S3CCL4 polygalacturonase-like1.74e-0769.7Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        E+V+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
A0A5A7VKX0 Polygalacturonase1.95e-0769.7Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        E+V+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
A0A5D3C3E8 Polygalacturonase1.95e-0769.7Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
        E+V+LTY+NQ A A C +VGGI AGL+QPTSCF
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSCF
Q3LG81 Endopolygalacturonase (Fragment)5.69e-0770.97Show/hide
Query:  VKLTYINQIAAAICRHVGGITAGLLQPTSCF
        VKLTY NQ A A C H GG TAG +QPTSCF
Subjt:  VKLTYINQIAAAICRHVGGITAGLLQPTSCF
SwissProt top hitse value%identityAlignment
P48979 Polygalacturonase7.1e-0562.5Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSC
        EDVKLTY NQ A + C H  G T G++QPTSC
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQPTSC
Arabidopsis top hitse value%identityAlignment
AT2G43870.1 Pectin lyase-like superfamily protein5.6e-0565.52Show/hide
Query:  EDVKLTYINQIAAAICRHVGGITAGLLQP
        EDVKLTY N+ AA+ C H GGI AG  QP
Subjt:  EDVKLTYINQIAAAICRHVGGITAGLLQP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGATGAGTAAGGAAGACGTAAAGCTTACTTATATCAATCAAATAGCTGCAGCAATTTGTAGACATGTAGGAGGCATTACTGCAGGTCTTCTTCAACCCACCAGTTGCTT
C
mRNA sequenceShow/hide mRNA sequence
AAGATGAGTAAGGAAGACGTAAAGCTTACTTATATCAATCAAATAGCTGCAGCAATTTGTAGACATGTAGGAGGCATTACTGCAGGTCTTCTTCAACCCACCAGTTGCTT
C
Protein sequenceShow/hide protein sequence
KMSKEDVKLTYINQIAAAICRHVGGITAGLLQPTSCF