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MC04g0747 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0747
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC04:8728237..8728419
RNA-Seq ExpressionMC04g0747
SyntenyMC04g0747
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW98674.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]2.25e-0941.94Show/hide
Query:  HSFLSWLDIRNRLRS------WCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS
        HSF+ W+ I+NRL +      W P  P  CVLC    ++ DH+FF C +S+LVW  M+ ++S
Subjt:  HSFLSWLDIRNRLRS------WCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS

GEZ17200.1 reverse transcriptase zinc-binding domain-containing protein [Tanacetum cinerariifolium]4.45e-1041.94Show/hide
Query:  HSFLSWLDIRNRLRS------WCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS
        HSF+ W+ I+NRL +      W P  P  CVLC    ++ DH+FF C +S+LVW  M+ ++S
Subjt:  HSFLSWLDIRNRLRS------WCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS

XP_010421785.1 PREDICTED: uncharacterized protein LOC104707187 [Camelina sativa]1.42e-0937.88Show/hide
Query:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISSSDH
        ++FL WL ++NR      L+ W P +  SC+LC+ + ET +H+FF C +S LVW G+I  + + ++
Subjt:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISSSDH

XP_019058995.1 PREDICTED: uncharacterized protein LOC109117009 [Tarenaya hassleriana]1.07e-0944.62Show/hide
Query:  HSFLSWLDI------RNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISSSD
        H+F+SWL +      R+RL SW   +P  C+LC   IET  HIFF C FSN +W  ++ S   SD
Subjt:  HSFLSWLDI------RNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISSSD

XP_026447428.1 uncharacterized protein LOC113347950 [Papaver somniferum]3.53e-1147.62Show/hide
Query:  HSFLSWLDIRNRLR------SWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISS
        HSF+SWL    RL+      SW   S  SCVLC D +ET DHIF  CIFS+ +W G++  + S
Subjt:  HSFLSWLDIRNRLR------SWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISS

TrEMBL top hitse value%identityAlignment
A0A078G3X9 Uridine kinase3.78e-0947.37Show/hide
Query:  HSFLSWLDIRNRL------RSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGM
        +SF++WL I NRL      R W      SCV C+D +E+ DH+FFVC FS  VW G+
Subjt:  HSFLSWLDIRNRL------RSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGM

A0A1J3G9V3 zf-RVT domain-containing protein (Fragment)6.25e-0944.07Show/hide
Query:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIA
        H+F+ W      L  R+RLRSW    P SC+LCS   E+  H+FF C FSN VW  + +
Subjt:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIA

A0A3P6CHT9 zf-RVT domain-containing protein4.04e-0944.07Show/hide
Query:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIA
        H+F++WL +RNR      LR W  + P  C+LC    ET  H+FF C FS  VW G++A
Subjt:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIA

A0A6J0LT88 uncharacterized protein LOC1088341107.58e-0943.55Show/hide
Query:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS
        H+F+SW+  RNR      L SW    P SCVLCS  IE+  H+FF C FS+ VW   +++++
Subjt:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASIS

O81284 AT4g02490 protein3.76e-0950Show/hide
Query:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW
        H+F+SW      L  R+RLRSW    P  CVLC+ V ET DH+FF C FS+ +W
Subjt:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.7e-0640.74Show/hide
Query:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW
        H+F+ W      L  R+RLRSW    P  C+LC+   E+  H+FF C F   VW
Subjt:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW

AT1G45063.1 copper ion binding;electron carriers9.2e-0545.24Show/hide
Query:  LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW
        L I +R  SW    P  C+LC+ + ET  H+FF C FS+ VW
Subjt:  LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVW

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.5e-0744Show/hide
Query:  HSFLSWLDIRNRLR------SWCPYSPGSCVLCSDVIETPDHIFFVCIFS
        +S L+W+ I+NRL       SW   +  SCVLC  ++ET DH+FF C +S
Subjt:  HSFLSWLDIRNRLR------SWCPYSPGSCVLCSDVIETPDHIFFVCIFS

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.7e-0636.67Show/hide
Query:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIAS
        H+F+ W      L  R+RL++W    P  C+LC+   ++  H+FF C FS +VW    AS
Subjt:  HSFLSW------LDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIAS

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.8e-0742Show/hide
Query:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFS
        H+F+SW++IR+R      L SW  + P  C+LC+   ET  H+FF C+F+
Subjt:  HSFLSWLDIRNR------LRSWCPYSPGSCVLCSDVIETPDHIFFVCIFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTCTTTCTTGAGTTGGTTGGATATTCGTAATCGTCTTCGTTCTTGGTGTCCTTATAGTCCAGGTTCTTGTGTCCTTTGTTCTGATGTGATTGAAACTCCAGACCATAT
TTTCTTTGTTTGTATTTTTAGCAATCTTGTATGGGGTGGTATGATTGCTTCAATAAGCTCTTCAGATCATATT
mRNA sequenceShow/hide mRNA sequence
CATTCTTTCTTGAGTTGGTTGGATATTCGTAATCGTCTTCGTTCTTGGTGTCCTTATAGTCCAGGTTCTTGTGTCCTTTGTTCTGATGTGATTGAAACTCCAGACCATAT
TTTCTTTGTTTGTATTTTTAGCAATCTTGTATGGGGTGGTATGATTGCTTCAATAAGCTCTTCAGATCATATT
Protein sequenceShow/hide protein sequence
HSFLSWLDIRNRLRSWCPYSPGSCVLCSDVIETPDHIFFVCIFSNLVWGGMIASISSSDHI