; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0779 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0779
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionla-related protein 6B
Genome locationMC04:10064107..10069296
RNA-Seq ExpressionMC04g0779
SyntenyMC04g0779
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR002344 - Lupus La protein
IPR006630 - La-type HTH domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157471.1 la-related protein 6B [Momordica charantia]1.26e-22297.71Show/hide
Query:  MAQDSTPTAPDSSSSSSSSSSS-----PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH
        MAQDSTPTAPDSSSSSSSSSSS     PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH
Subjt:  MAQDSTPTAPDSSSSSSSSSSS-----PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH

Query:  VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL
        VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL
Subjt:  VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL

Query:  NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH
        NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH
Subjt:  NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH

Query:  QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNK+  F
Subjt:  QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

XP_022928061.1 la-related protein 6B-like [Cucurbita moschata]1.90e-18687.61Show/hide
Query:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG----PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI
        SSSS S SPS   PSQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQP  S+ G    PPPP  KQSPRILIPSPPPPP V+HVYPP PPGSPFHVPI
Subjt:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG----PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI

Query:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL
        QSPVPVP    T VVSI NHHYHPHHRHHHH SHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP VESDY APSR+KLTEEVSQKLLNQVEYYFSDL
Subjt:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL

Query:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV
        NLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMV+EDGKKVRRK PLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAV
Subjt:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV

Query:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        GSVKNIRTCQPQISD+G SSTSKSAKADGMHYSNK+  F
Subjt:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

XP_022969525.1 la-related protein 6B-like [Cucurbita maxima]8.16e-18888.5Show/hide
Query:  SSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI
        SSSS S S SPS   PSQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQP QS+ G  PPPPP KQSPRILIPSPPPPP V+HVYPP PPGSPFHVPI
Subjt:  SSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI

Query:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL
        QSPVPVP    T VVSI NHHYHPHHRHHHH SHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP VESDY APSR+KLT EVSQKLLNQVEYYFSDL
Subjt:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL

Query:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV
        NLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMVSEDGKKVRRK PLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAV
Subjt:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV

Query:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        GSVKNIRTCQPQISDSG SSTSKSAK DGMHYSNK+  F
Subjt:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

XP_023530713.1 la-related protein 6B-like [Cucurbita pepo subsp. pepo]3.09e-18687.46Show/hide
Query:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPP---QKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVP
        SSSS S SPS   PSQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQP  S+ G  PPPPP    KQSPRILIPSPPPPP V+HVYPP PPGSPFHVP
Subjt:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPP---QKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVP

Query:  IQSPVP------VPTRVVSIQNHHYHPHHRHHHH--SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYY
        IQSPVP      VPT VVSI NHHYHPHHRHHHH  SHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP VESDY APSR+KLTEEVSQKLLNQVEYY
Subjt:  IQSPVP------VPTRVVSIQNHHYHPHHRHHHH--SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYY

Query:  FSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKI
        FSDLNLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMVSEDGKKVRRK PLSESDMEELQSRIVIAENLP+DHCHQNLMKI
Subjt:  FSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKI

Query:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        FSAVGSVKNIRTCQPQISDSG SSTSKSAKADGMHYSNK+  F
Subjt:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

XP_038888029.1 la-related protein 6B [Benincasa hispida]4.15e-19192.77Show/hide
Query:  SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQ-KQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHH
        SQSDPSLSRNSSLSRLNAQAPEFVPTRPS R DLQP QSAPGPPPPP  KQSPRILIPSPPPPP ++HVYPP PPGSPFHVPIQ+PVPVPT VVSIQNHH
Subjt:  SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQ-KQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHH

Query:  YHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPD-AVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVP
        YHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PD AVVQQPQKP VESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDG VP
Subjt:  YHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPD-AVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVP

Query:  ISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASST
        ISVVASFKKIKALI+SHSQLANILR SSKLMVSEDGKKV+RK PLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSA GSVKNIRTCQPQISDSGASST
Subjt:  ISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASST

Query:  SKSAKADGMHYSNKVFLF
        SKSAKADGMHYSNK+  F
Subjt:  SKSAKADGMHYSNKVFLF

TrEMBL top hitse value%identityAlignment
A0A0A0K7B6 Lupus la ribonucleoprotein1.43e-19882.31Show/hide
Query:  SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPP--GVLHVYPPHPPGSPFHVPIQS-PVPVPTRVVSIQN
        SQSD SLSRNSSLSRLNAQAPEFVPTRPS R DLQP        PPP KQSPRILIPSPPPPP   ++H YPP PPGSPFHVPIQ+ PVPVPT VVSIQN
Subjt:  SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPP--GVLHVYPPHPPGSPFHVPIQS-PVPVPTRVVSIQN

Query:  HHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQP-QKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGC
        H YHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PD  V QP QKP VESDYAAPSRSKLT+EVSQKLLNQVEYYFSDLNLATTDHLMRF+NKDPDG 
Subjt:  HHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQP-QKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGC

Query:  VPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALI+SH QLANILR SSKL+VSEDGKKV+RK P SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  STSKSAKADGMHYSNKVFLFSAAWGIWVWC-NLSPPLTSSIVGTIYDFFKIFVGGIDQNLYKDLFQMRWGTPV
        STSKSAKADGMHYSNKV+LF+AAW I  +C N   PLTSSI GT++DF K+    I  N + D FQ++WGTPV
Subjt:  STSKSAKADGMHYSNKVFLFSAAWGIWVWC-NLSPPLTSSIVGTIYDFFKIFVGGIDQNLYKDLFQMRWGTPV

A0A6J1DY71 la-related protein 6B6.11e-22397.71Show/hide
Query:  MAQDSTPTAPDSSSSSSSSSSS-----PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH
        MAQDSTPTAPDSSSSSSSSSSS     PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH
Subjt:  MAQDSTPTAPDSSSSSSSSSSS-----PSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLH

Query:  VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL
        VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL
Subjt:  VYPPHPPGSPFHVPIQSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLL

Query:  NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH
        NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH
Subjt:  NQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCH

Query:  QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNK+  F
Subjt:  QNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

A0A6J1EJ80 la-related protein 6B-like9.18e-18787.61Show/hide
Query:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG----PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI
        SSSS S SPS   PSQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQP  S+ G    PPPP  KQSPRILIPSPPPPP V+HVYPP PPGSPFHVPI
Subjt:  SSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG----PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI

Query:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL
        QSPVPVP    T VVSI NHHYHPHHRHHHH SHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP VESDY APSR+KLTEEVSQKLLNQVEYYFSDL
Subjt:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL

Query:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV
        NLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMV+EDGKKVRRK PLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAV
Subjt:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV

Query:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        GSVKNIRTCQPQISD+G SSTSKSAKADGMHYSNK+  F
Subjt:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

A0A6J1I059 la-related protein 6B-like3.95e-18888.5Show/hide
Query:  SSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI
        SSSS S S SPS   PSQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQP QS+ G  PPPPP KQSPRILIPSPPPPP V+HVYPP PPGSPFHVPI
Subjt:  SSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPG--PPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI

Query:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL
        QSPVPVP    T VVSI NHHYHPHHRHHHH SHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP VESDY APSR+KLT EVSQKLLNQVEYYFSDL
Subjt:  QSPVPVP----TRVVSIQNHHYHPHHRHHHH-SHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDL

Query:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV
        NLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMVSEDGKKVRRK PLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAV
Subjt:  NLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAV

Query:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF
        GSVKNIRTCQPQISDSG SSTSKSAK DGMHYSNK+  F
Subjt:  GSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVFLF

A0A6J1I3E0 la-related protein 6B-like4.59e-18689.26Show/hide
Query:  SSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQ-QSAPGPPPPPQKQSPRILIPSPPPPP-GVLHVYPPHPPGSPFHVPIQSPVPVPT
        SS SS +PSQSDPSLSRNSSLSRLNAQAPEFVPTRPS R DLQP   SA GP PPP KQSPRILIPSPPPPP  ++HVYPP PPGSPFHVPIQSPVPVPT
Subjt:  SSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQ-QSAPGPPPPPQKQSPRILIPSPPPPP-GVLHVYPPHPPGSPFHVPIQSPVPVPT

Query:  RVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFIN
         VVS+QNHHYH HHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQ QKPQVE+DYAAPSRSKLTE+VS KLLNQVEYYFSDLNL TTDHLMRFIN
Subjt:  RVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFIN

Query:  KDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI
        KDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMVSEDGKKV+RK PLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI
Subjt:  KDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI

Query:  SDSGASSTSKSAKADGMHYSNKVFLF
        SDSGASSTSKSAKADGMHYS+K+  F
Subjt:  SDSGASSTSKSAKADGMHYSNKVFLF

SwissProt top hitse value%identityAlignment
O80567 La-related protein 6B9.1e-7453.61Show/hide
Query:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS
        STP    S   S S S+S ++SA S SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP G+LH+Y   P   
Subjt:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS

Query:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK
        PF+ P+  PVP+   +V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +  +  S++ 
Subjt:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK

Query:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI
        L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+G VPI VVASFKKIKA+I+++SQLA +L+ S+KL VSEDGKKVRR  P++ES +EELQSRI++
Subjt:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI

Query:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLF
        AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV  F
Subjt:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLF

Q28G87 La-related protein 74.9e-1129.25Show/hide
Query:  PDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSED
        P   V++ +   +  D     RS++ +++   +  QV+++F D+NL     L   I K  DG + IS++ASF K+K + +    +A  ++ SS + ++  
Subjt:  PDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSED

Query:  GKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV
        G K+RR+ PL E   +++ SR V  E LP++  H  + ++F   G V
Subjt:  GKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV

Q93ZV7 La protein 13.4e-1234.04Show/hide
Query:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALI------------SSHSQLANILRKSSKLMVSEDGKKVRRKLPL--
        LTEE ++ +L QVE+YFSD NL   D L + + +  DG V ++++ SF K++  +             +   +A+ LR SS L +S+DGKKV R   L  
Subjt:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALI------------SSHSQLANILRKSSKLMVSEDGKKVRRKLPL--

Query:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
         E  +E+L +R V A     D   +++   FS  G V ++R
Subjt:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Q94A38 La-related protein 6A3.6e-2240.43Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G VPIS +A+F K+K L   H+ + + L++SS L+VS D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK

Q9LHL3 La-related protein 6C7.8e-3345.45Show/hide
Query:  HPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQ
        H H+P        F+  +  VQ P       + ++ S++ L++++  K++ QVEY F+D++L   + + + I+KDP+G VP+S +AS KKIKAL S+H  
Subjt:  HPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQ

Query:  LANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        ++  LR SSKL+VSEDGKKV+R    ++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

Arabidopsis top hitse value%identityAlignment
AT2G43970.1 RNA-binding protein6.5e-7553.61Show/hide
Query:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS
        STP    S   S S S+S ++SA S SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP G+LH+Y   P   
Subjt:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS

Query:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK
        PF+ P+  PVP+   +V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +  +  S++ 
Subjt:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK

Query:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI
        L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+G VPI VVASFKKIKA+I+++SQLA +L+ S+KL VSEDGKKVRR  P++ES +EELQSRI++
Subjt:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI

Query:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLF
        AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV  F
Subjt:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLF

AT2G43970.2 RNA-binding protein8.4e-7553.41Show/hide
Query:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS
        STP    S   S S S+S ++SA S SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP G+LH+Y   P   
Subjt:  STPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGS

Query:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK
        PF+ P+  PVP+   +V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +  +  S++ 
Subjt:  PFHVPIQSPVPVPTRVVSIQNHH-YHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDAVVQQ-------------PQKPQVESDYAAPSRSK

Query:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI
        L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+G VPI VVASFKKIKA+I+++SQLA +L+ S+KL VSEDGKKVRR  P++ES +EELQSRI++
Subjt:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVI

Query:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLFSAAWGIW
        AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV   S A G W
Subjt:  AENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVFLFSAAWGIW

AT3G19090.1 RNA-binding protein5.5e-3445.45Show/hide
Query:  HPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQ
        H H+P        F+  +  VQ P       + ++ S++ L++++  K++ QVEY F+D++L   + + + I+KDP+G VP+S +AS KKIKAL S+H  
Subjt:  HPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQ

Query:  LANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        ++  LR SSKL+VSEDGKKV+R    ++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

AT5G46250.1 RNA-binding protein2.6e-2340.43Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G VPIS +A+F K+K L   H+ + + L++SS L+VS D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK

AT5G46250.2 RNA-binding protein2.6e-2340.43Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G VPIS +A+F K+K L   H+ + + L++SS L+VS D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAAGATTCAACCCCTACTGCTCCAGATTCTTCTTCTTCGTCTTCGTCTTCGTCTTCTTCCCCTTCTTCTTCTGCGCCATCGCAATCGGATCCATCTCTGTCTCG
GAACTCTTCTCTCAGTCGTCTCAACGCGCAGGCTCCTGAGTTTGTGCCTACTCGACCCTCTCCTCGTCCCGATCTACAACCGCAGCAGTCGGCCCCCGGGCCACCGCCTC
CTCCGCAGAAGCAATCGCCCAGGATTCTGATCCCTTCTCCTCCGCCGCCGCCTGGTGTGCTGCATGTTTATCCTCCGCATCCGCCGGGTTCTCCCTTCCATGTTCCCATT
CAGAGTCCTGTGCCCGTACCCACTCGTGTGGTTTCTATTCAGAATCATCATTATCATCCCCATCACCGCCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCC
TCATAACCCTCAGTATTATGCCGATAACGGTGGGTTTCATGAGCCAGACGCAGTTGTGCAACAACCTCAGAAGCCTCAGGTTGAGTCCGATTATGCTGCTCCATCTAGAA
GTAAACTCACTGAGGAAGTCTCCCAAAAGCTCTTGAATCAGGTGGAATATTATTTCAGTGATTTAAACTTGGCAACTACTGATCATTTGATGAGGTTCATCAATAAAGAT
CCCGATGGATGTGTGCCTATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAGTAGTCACTCACAGCTAGCCAATATTTTGCGGAAATCTTCTAAGCTTAT
GGTTAGTGAAGATGGAAAGAAAGTTAGACGTAAACTACCTCTTTCTGAATCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCTGAGGATCATT
GCCACCAAAACCTCATGAAGATTTTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCTGATAGTGGAGCTTCTTCAACATCTAAATCAGCA
AAAGCTGATGGAATGCATTACAGTAACAAGGTATTCCTATTTTCTGCAGCATGGGGGATTTGGGTTTGGTGCAATCTTTCTCCTCCATTAACCTCTAGCATTGTAGGGAC
AATATATGATTTCTTTAAAATTTTTGTTGGAGGGATTGACCAAAATCTCTACAAGGACCTGTTCCAAATGAGGTGGGGAACACCTGTT
mRNA sequenceShow/hide mRNA sequence
GAAAAAGTAAAGTAGTATAAATAGTAGTGAAGTGATTGTTTTCAATCGAGAAATCTTCTCCCGCAGTTGCCTTCTTCGCCCCCACTGGGCTCTATTTTCCTTTTTTATTC
CTTTTTTTTGGTGTTTTTTTTAAATTTTAATTTTTAGTTTTTACAAATTTTAATTTTAAATTTTGTTTTTCTTCTTCCTCCTCCTCCTGTCAGAGGCAGAGGACACTCTC
TGTTCCTCTCCAACTCGATCTGTAGATTTTCAGTTCAGAGAACTCCGTATCCGTCGCTTTCGTTCCCTCCGATGGCACAAGATTCAACCCCTACTGCTCCAGATTCTTCT
TCTTCGTCTTCGTCTTCGTCTTCTTCCCCTTCTTCTTCTGCGCCATCGCAATCGGATCCATCTCTGTCTCGGAACTCTTCTCTCAGTCGTCTCAACGCGCAGGCTCCTGA
GTTTGTGCCTACTCGACCCTCTCCTCGTCCCGATCTACAACCGCAGCAGTCGGCCCCCGGGCCACCGCCTCCTCCGCAGAAGCAATCGCCCAGGATTCTGATCCCTTCTC
CTCCGCCGCCGCCTGGTGTGCTGCATGTTTATCCTCCGCATCCGCCGGGTTCTCCCTTCCATGTTCCCATTCAGAGTCCTGTGCCCGTACCCACTCGTGTGGTTTCTATT
CAGAATCATCATTATCATCCCCATCACCGCCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAACCCTCAGTATTATGCCGATAACGGTGGGTTTCA
TGAGCCAGACGCAGTTGTGCAACAACCTCAGAAGCCTCAGGTTGAGTCCGATTATGCTGCTCCATCTAGAAGTAAACTCACTGAGGAAGTCTCCCAAAAGCTCTTGAATC
AGGTGGAATATTATTTCAGTGATTTAAACTTGGCAACTACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATGTGTGCCTATATCGGTTGTTGCATCATTC
AAGAAGATTAAGGCTCTCATTAGTAGTCACTCACAGCTAGCCAATATTTTGCGGAAATCTTCTAAGCTTATGGTTAGTGAAGATGGAAAGAAAGTTAGACGTAAACTACC
TCTTTCTGAATCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATTTTTTCTGCTGTTGGGA
GTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCTGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAACAAGGTATTCCTA
TTTTCTGCAGCATGGGGGATTTGGGTTTGGTGCAATCTTTCTCCTCCATTAACCTCTAGCATTGTAGGGACAATATATGATTTCTTTAAAATTTTTGTTGGAGGGATTGA
CCAAAATCTCTACAAGGACCTGTTCCAAATGAGGTGGGGAACACCTGTT
Protein sequenceShow/hide protein sequence
MAQDSTPTAPDSSSSSSSSSSSPSSSAPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPQQSAPGPPPPPQKQSPRILIPSPPPPPGVLHVYPPHPPGSPFHVPI
QSPVPVPTRVVSIQNHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDAVVQQPQKPQVESDYAAPSRSKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKD
PDGCVPISVVASFKKIKALISSHSQLANILRKSSKLMVSEDGKKVRRKLPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSA
KADGMHYSNKVFLFSAAWGIWVWCNLSPPLTSSIVGTIYDFFKIFVGGIDQNLYKDLFQMRWGTPV