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MC04g0786 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0786
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNase H domain-containing protein
Genome locationMC04:10431758..10432152
RNA-Seq ExpressionMC04g0786
SyntenyMC04g0786
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4279811.1 unnamed protein product [Prunus armeniaca]1.31e-1135.71Show/hide
Query:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGR-SLKLLVLKVF
        R  P   LK+N DAA   +    G+G+++RD +G + +AGC+      + +  E  AI   LL  + +G S L VESDSL  I +L G  ++ + V  + 
Subjt:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGR-SLKLLVLKVF

Query:  HDIQQVFRRFEVCSFLHVPRESNRPA
         DI+Q+  +F+ C FL+ PR  N+ A
Subjt:  HDIQQVFRRFEVCSFLHVPRESNRPA

KAF9611968.1 hypothetical protein IFM89_037251 [Coptis chinensis]2.09e-1338.4Show/hide
Query:  LKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNG--RSLKLLVLKVFHDIQQV
        + LNTD AC G    +GLG ++R Y GT   A   F+P S T  +AE LA+  GL L        L ++SDS A IS + G  R        +  DI+++
Subjt:  LKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNG--RSLKLLVLKVFHDIQQV

Query:  FRRFEVCSFLHVPRESNRPADFLAK
        F  F   S  H+ RE+N  AD LA+
Subjt:  FRRFEVCSFLHVPRESNRPADFLAK

PWA52426.1 hypothetical protein CTI12_AA454980 [Artemisia annua]2.79e-1233.07Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI
        P ++ +K+N DAA +      GLG + RDY G +  +G +   ++ +P+ AE  AIH  +   I  G S ++ E+DSL  +  L+ +   L +  +F DI
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI

Query:  QQVFRRFEVCSFLHVPRESNRPADFLA
              F VC++  V RE NR A  +A
Subjt:  QQVFRRFEVCSFLHVPRESNRPADFLA

PWA59265.1 hypothetical protein CTI12_AA390900 [Artemisia annua]6.41e-1233.07Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI
        P ++ +K+N DAA +      GLGF+ RDY G    +G +   ++ +P+ AE  A+H  +   I  G S ++ E+DSL  +  L+ +   L +  +F DI
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI

Query:  QQVFRRFEVCSFLHVPRESNRPADFLA
              F VC++  V RE NR A  +A
Subjt:  QQVFRRFEVCSFLHVPRESNRPADFLA

XP_013699975.1 uncharacterized protein LOC106403717 [Brassica napus]4.47e-1135.48Show/hide
Query:  GLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDIQQVF
        G  + TDAA +   +  GLG++  D+ G    +  +   F  +P++AE LAI   LL     G S L V+SD+   +  +N R L   +  +FHDI ++ 
Subjt:  GLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDIQQVF

Query:  RRFEVCSFLHVPRESNRPADFLAK
          F V SF+ +PR  N  AD LAK
Subjt:  RRFEVCSFLHVPRESNRPADFLAK

TrEMBL top hitse value%identityAlignment
A0A2N9GQQ4 RNase H domain-containing protein6.44e-1135.66Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSL-KLLVLKVFHD
        PPL   KLNTD +  G     G G ++R++ G       + +  + T + AEL A+  GL L I  G   L +E DSL +I L+   S     +  +  D
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSL-KLLVLKVFHD

Query:  IQQVFRRFEVCSFLHVPRESNRPADFLAK
         + +  RFE+CS  H+ RE+N  AD LAK
Subjt:  IQQVFRRFEVCSFLHVPRESNRPADFLAK

A0A2U1LTU4 RNase H domain-containing protein1.35e-1233.07Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI
        P ++ +K+N DAA +      GLG + RDY G +  +G +   ++ +P+ AE  AIH  +   I  G S ++ E+DSL  +  L+ +   L +  +F DI
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI

Query:  QQVFRRFEVCSFLHVPRESNRPADFLA
              F VC++  V RE NR A  +A
Subjt:  QQVFRRFEVCSFLHVPRESNRPADFLA

A0A2U1MDC9 Uncharacterized protein3.11e-1233.07Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI
        P ++ +K+N DAA +      GLGF+ RDY G    +G +   ++ +P+ AE  A+H  +   I  G S ++ E+DSL  +  L+ +   L +  +F DI
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI

Query:  QQVFRRFEVCSFLHVPRESNRPADFLA
              F VC++  V RE NR A  +A
Subjt:  QQVFRRFEVCSFLHVPRESNRPADFLA

A0A5C7GQX3 RNase H domain-containing protein3.35e-1134.62Show/hide
Query:  VPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASIS-LLNGRSLKLLVLKVFH
         PP    K+NTDAA   + +  G+G ++R++ G +  + C+    + +P++AE LA+  GL L    G    ++ESD+L  +  +    SL   V  V  
Subjt:  VPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASIS-LLNGRSLKLLVLKVFH

Query:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK
        DI    R F   SF HVPR +N+ A  LAK
Subjt:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK

A0A6J5UV01 Reverse transcriptase domain-containing protein6.33e-1235.71Show/hide
Query:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGR-SLKLLVLKVF
        R  P   LK+N DAA   +    G+G+++RD +G + +AGC+      + +  E  AI   LL  + +G S L VESDSL  I +L G  ++ + V  + 
Subjt:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGR-SLKLLVLKVF

Query:  HDIQQVFRRFEVCSFLHVPRESNRPA
         DI+Q+  +F+ C FL+ PR  N+ A
Subjt:  HDIQQVFRRFEVCSFLHVPRESNRPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.5e-0728.46Show/hide
Query:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFH
        R PP   +K N DA  + +      G+++R+++GT    G   L  +  P+ AE  A+ A L      G + + +E D    I+L+NG S    +     
Subjt:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFH

Query:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK
        DI     +F    F  + R+ N+ A  LAK
Subjt:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK

AT4G29090.1 Ribonuclease H-like superfamily protein6.9e-1029.23Show/hide
Query:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFH
        R PP   +K NTDA     +   G+G++LR+  G +   G + LP   + + AEL A+   +L +     ++++ ESDS   I +LN   +   +     
Subjt:  RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFH

Query:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK
        D+Q++  +F    F+ +PRE N  A+ +A+
Subjt:  DIQQVFRRFEVCSFLHVPRESNRPADFLAK

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-0529.69Show/hide
Query:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI
        P  D LK N DA+   R+  +GLG++LR+  GT+ + G        T   AE   +   +      G   ++ E D+     ++N +S    +      I
Subjt:  PPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDI

Query:  QQVFRRFEVCSFLHVPRESNRPADFLAK
        Q     FE   F    RE N  ADFLAK
Subjt:  QQVFRRFEVCSFLHVPRESNRPADFLAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGGTTCCTCCATTGGATGGCCTCAAGCTCAATACAGACGCTGCTTGTGAAGGCAGAGATCATTTTACAGGTTTGGGGTTTCTTCTGAGGGACTACTTTGGAACCCTCAC
CAAGGCTGGTTGTCAATTTCTACCATTTTCACATACACCCATTCTTGCAGAGCTTCTAGCCATTCATGCTGGTTTACTCCTTGTGATCTTTAATGGATGCTCTTGGCTTC
TGGTGGAATCGGACTCCCTCGCTTCAATTTCGCTACTCAATGGTAGATCTCTGAAACTCTTGGTCCTAAAAGTGTTTCACGACATTCAACAGGTTTTTCGTCGATTTGAA
GTCTGCTCCTTCTTGCATGTCCCTCGAGAAAGCAATCGCCCGGCTGATTTCCTTGCAAAA
mRNA sequenceShow/hide mRNA sequence
CGGGTTCCTCCATTGGATGGCCTCAAGCTCAATACAGACGCTGCTTGTGAAGGCAGAGATCATTTTACAGGTTTGGGGTTTCTTCTGAGGGACTACTTTGGAACCCTCAC
CAAGGCTGGTTGTCAATTTCTACCATTTTCACATACACCCATTCTTGCAGAGCTTCTAGCCATTCATGCTGGTTTACTCCTTGTGATCTTTAATGGATGCTCTTGGCTTC
TGGTGGAATCGGACTCCCTCGCTTCAATTTCGCTACTCAATGGTAGATCTCTGAAACTCTTGGTCCTAAAAGTGTTTCACGACATTCAACAGGTTTTTCGTCGATTTGAA
GTCTGCTCCTTCTTGCATGTCCCTCGAGAAAGCAATCGCCCGGCTGATTTCCTTGCAAAA
Protein sequenceShow/hide protein sequence
RVPPLDGLKLNTDAACEGRDHFTGLGFLLRDYFGTLTKAGCQFLPFSHTPILAELLAIHAGLLLVIFNGCSWLLVESDSLASISLLNGRSLKLLVLKVFHDIQQVFRRFE
VCSFLHVPRESNRPADFLAK