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MC04g0859 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0859
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMADS-box transcription factor 8-like
Genome locationMC04:13954538..13954684
RNA-Seq ExpressionMC04g0859
SyntenyMC04g0859
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576135.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia]4.46e-1165.31Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
        RC R     +RR+ LIKKAR+L +LCD ++GLVIFTNRG LYEFCS NR
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
KAG6592961.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. sororia]3.40e-1062.5Show/hide
Query:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
        C R     +RRS LIKKAR+L +LCD ++GLV+FTNRG LYEFCS +R
Subjt:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
KAG7014654.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.24e-1165.31Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
        RC R     +RR+ LIKKAR+L +LCD ++GLVIFTNRG LYEFCS NR
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
XP_023004227.1 MADS-box protein 04g005320-like [Cucurbita maxima]7.67e-0966.67Show/hide
Query:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        C R     +RRS LIKKAR+L +LCD ++GLVIFTNRG LYEFCS
Subjt:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]2.03e-0964.58Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
        RC R     +RR+ LIKKAR+L +LCD ++GLVIFTNRG LYEFCS N
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
TrEMBL top hitse value%identityAlignment
A0A1S3CCC5 MADS-box transcription factor 8-like5.17e-0958.33Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
        RC R     +RRS L+KKAR+L +LCD ++G+++FTNRG LYEFCS N
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
A0A2H5NVK5 MADS-box domain-containing protein1.08e-0868.29Show/hide
Query:  SQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
        S+RRS LIKKAR+L +LCD  L LVIF++RG LYEFCS +R
Subjt:  SQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRNR
A0A6J1DPA0 MADS-box transcription factor 8-like isoform X38.16e-0963.83Show/hide
Query:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
        C R     +RRS LIKKAR+L +LCD +LGL+IFTNRG LYEFC  N
Subjt:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCSRN
A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like5.39e-0964.44Show/hide
Query:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        C R     +RRS LIKKAR+L +LCD ++GLV+FTNRG LYEFCS
Subjt:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
A0A6J1KPU7 MADS-box protein 04g005320-like3.71e-0966.67Show/hide
Query:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        C R     +RRS LIKKAR+L +LCD ++GLVIFTNRG LYEFCS
Subjt:  CERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
SwissProt top hitse value%identityAlignment
O04067 Agamous-like MADS-box protein AGL9 homolog2.7e-0450Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
Q03489 Agamous-like MADS-box protein AGL9 homolog2.7e-0450Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
Q38694 Agamous-like MADS-box protein AGL9 homolog5.5e-0552.17Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR RL+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
Q42464 Agamous-like MADS-box protein AGL9 homolog2.7e-0450Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
Q7Y040 MADS-box protein EJ22.7e-0450Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein1.9e-0550Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
AT1G24260.2 K-box region and MADS-box transcription factor family protein1.9e-0550Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
AT1G24260.3 K-box region and MADS-box transcription factor family protein1.9e-0550Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
AT5G15800.1 K-box region and MADS-box transcription factor family protein1.9e-0550Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
AT5G15800.2 K-box region and MADS-box transcription factor family protein1.9e-0550Show/hide
Query:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS
        +  R+   ++RR+ L+KKA +L +LCD ++ L+IF+NRG LYEFCS
Subjt:  RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRG-LYEFCS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGTGCGAGCGACGATCCGGCAGCAGCCAGAGAAGATCTAGACTCATTAAGAAGGCTCGTAAGCTCCCTTTGCTCTGTGACTTTAAGCTCGGACTCGTCATCTTTACCAA
TCGTGGCCTCTATGAGTTTTGCAGCAGAAATAGGTAC
mRNA sequenceShow/hide mRNA sequence
CGGTGCGAGCGACGATCCGGCAGCAGCCAGAGAAGATCTAGACTCATTAAGAAGGCTCGTAAGCTCCCTTTGCTCTGTGACTTTAAGCTCGGACTCGTCATCTTTACCAA
TCGTGGCCTCTATGAGTTTTGCAGCAGAAATAGGTAC
Protein sequenceShow/hide protein sequence
RCERRSGSSQRRSRLIKKARKLPLLCDFKLGLVIFTNRGLYEFCSRNRY