; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0866 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0866
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC04:14356242..14356551
RNA-Seq ExpressionMC04g0866
SyntenyMC04g0866
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]2.01e-1645.45Show/hide
Query:  RDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAEDLD
        R+  +WS N  +GFSSKS +S ++   P+R F+F ++W++K+ KKVRFF  QVL  R N +D + R         CCILC++A EDLD
Subjt:  RDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAEDLD

VVA22845.1 Hypothetical predicted protein, partial [Prunus dulcis]4.47e-0937.86Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   R D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

VVA29318.1 Hypothetical predicted protein, partial [Prunus dulcis]1.25e-0836.89Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   + D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]3.70e-0837.86Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   R D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

XP_038887741.1 epimerase family protein SDR39U1 homolog, chloroplastic isoform X1 [Benincasa hispida]2.35e-1245.63Show/hide
Query:  ALLALLGDFVVNPRRDS-RLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAE
        +LL+LLGD  ++ RR +   WSPN  +G S    +S ++GS  +      +L KVKISK V FF  Q LHGRVNT+  I  HSS L G + C LC + +E
Subjt:  ALLALLGDFVVNPRRDS-RLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAE

Query:  DLD
        +LD
Subjt:  DLD

TrEMBL top hitse value%identityAlignment
A0A5D3E255 Reverse transcriptase9.73e-1745.45Show/hide
Query:  RDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAEDLD
        R+  +WS N  +GFSSKS +S ++   P+R F+F ++W++K+ KKVRFF  QVL  R N +D + R         CCILC++A EDLD
Subjt:  RDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFC-QVLHGRVNTLDHISRHSSALSGPRCCILCKEAAEDLD

A0A5E4F410 zf-RVT domain-containing protein (Fragment)2.17e-0937.86Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   R D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

A0A5E4FPC7 zf-RVT domain-containing protein (Fragment)6.05e-0936.89Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   + D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

M5VH03 zf-RVT domain-containing protein (Fragment)9.54e-0937.86Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   R D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

M5XV38 zf-RVT domain-containing protein1.32e-0837.86Show/hide
Query:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE
        LL +LG+  +   R D R W       FS KSF S ++ +       FSS+WK K   K++FF  +  +GR+NT D I R    +   P  C+LCKE AE
Subjt:  LLALLGDF-VVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVL-HGRVNTLDHISRHSSALS-GPRCCILCKEAAE

Query:  DLD
        ++D
Subjt:  DLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGTTGGCCTTGTTGGGGGACTTTGTTGTTAATCCGAGGAGGGATTCTCGTCTGTGGTCCCCTAATCTTCTAGAAGGATTTTCCAGCAAATCCTTCTACTCATG
TGTGGTGGGCTCCCTTCCCTCTCGCTGTTTTATTTTTTCTTCGCTTTGGAAGGTTAAGATTTCAAAGAAGGTTAGATTTTTTTGTCAGGTCTTACATGGAAGGGTTAATA
CTTTGGACCACATCTCGAGGCATTCTTCTGCTTTAAGCGGGCCCCGGTGCTGTATTCTTTGCAAGGAAGCCGCTGAGGATCTCGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTGTTGGCCTTGTTGGGGGACTTTGTTGTTAATCCGAGGAGGGATTCTCGTCTGTGGTCCCCTAATCTTCTAGAAGGATTTTCCAGCAAATCCTTCTACTCATG
TGTGGTGGGCTCCCTTCCCTCTCGCTGTTTTATTTTTTCTTCGCTTTGGAAGGTTAAGATTTCAAAGAAGGTTAGATTTTTTTGTCAGGTCTTACATGGAAGGGTTAATA
CTTTGGACCACATCTCGAGGCATTCTTCTGCTTTAAGCGGGCCCCGGTGCTGTATTCTTTGCAAGGAAGCCGCTGAGGATCTCGAT
Protein sequenceShow/hide protein sequence
MALLALLGDFVVNPRRDSRLWSPNLLEGFSSKSFYSCVVGSLPSRCFIFSSLWKVKISKKVRFFCQVLHGRVNTLDHISRHSSALSGPRCCILCKEAAEDLD