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MC04g0868 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0868
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationMC04:14419356..14419659
RNA-Seq ExpressionMC04g0868
SyntenyMC04g0868
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042047.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]1.06e-1952.13Show/hide
Query:  KTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRELD
        K   D+LV++EE +L+L  VSD +RY+ES +DEIS K   ID V   + GL I+EL++R +TLE  V RTDN++ G++SS  +AHME RV ELD
Subjt:  KTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRELD

KAA0054437.1 uncharacterized protein E6C27_scaffold24G001940 [Cucumis melo var. makuwa]1.39e-2352.94Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T Q  K   D+LVE+EEQ+L+L  V D++RY+ES ++EIS KA  ID +   + GL I+EL+ R +TL+  V RT N+  G+NSSS +AHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        LD
Subjt:  LD

KAA0061803.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]1.75e-1950.96Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKV--KRTDNFRCGENSSSLIAHMEERV
        MS    L K   D+LVE+EEQ+L+L  V D++RY+ES ++EIS K G ID V     GL I+EL+ R +TLE  +  +RT N+ CG++SS   AHMEERV
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKV--KRTDNFRCGENSSSLIAHMEERV

Query:  RELD
         ELD
Subjt:  RELD

KAA0066437.1 uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa]7.48e-2150Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T   SK   D+LVE+EEQ+L+L  V D++R++ES + EI+ K  +ID V   + GL I+EL+ R +TLE  V+RT N+  G++SS  +AHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        LD
Subjt:  LD

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.49e-3373.53Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFLR-VSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T QL K+++D+LVEIEE+LLFLR + DNLRYVES +DEIS KA  IDVVNA I+GLAIREL+LR ETLEDKVKRTDN   GE+SSS IAHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFLR-VSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        +D
Subjt:  LD

TrEMBL top hitse value%identityAlignment
A0A5A7TJX8 Senescence-specific cysteine protease sag395.15e-2052.13Show/hide
Query:  KTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRELD
        K   D+LV++EE +L+L  VSD +RY+ES +DEIS K   ID V   + GL I+EL++R +TLE  V RTDN++ G++SS  +AHME RV ELD
Subjt:  KTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRELD

A0A5A7UIN3 Uncharacterized protein6.74e-2452.94Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T Q  K   D+LVE+EEQ+L+L  V D++RY+ES ++EIS KA  ID +   + GL I+EL+ R +TL+  V RT N+  G+NSSS +AHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        LD
Subjt:  LD

A0A5A7V0W9 Senescence-specific cysteine protease sag398.48e-2050.96Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKV--KRTDNFRCGENSSSLIAHMEERV
        MS    L K   D+LVE+EEQ+L+L  V D++RY+ES ++EIS K G ID V     GL I+EL+ R +TLE  +  +RT N+ CG++SS   AHMEERV
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKV--KRTDNFRCGENSSSLIAHMEERV

Query:  RELD
         ELD
Subjt:  RELD

A0A5A7VH68 Uncharacterized protein3.62e-2150Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T   SK   D+LVE+EEQ+L+L  V D++R++ES + EI+ K  +ID V   + GL I+EL+ R +TLE  V+RT N+  G++SS  +AHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFL-RVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        LD
Subjt:  LD

A0A6J1DLQ6 uncharacterized protein LOC1110223207.22e-3473.53Show/hide
Query:  MSRTIQLSKTYVDKLVEIEEQLLFLR-VSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE
        MS T QL K+++D+LVEIEE+LLFLR + DNLRYVES +DEIS KA  IDVVNA I+GLAIREL+LR ETLEDKVKRTDN   GE+SSS IAHMEERV E
Subjt:  MSRTIQLSKTYVDKLVEIEEQLLFLR-VSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLR-ETLEDKVKRTDNFRCGENSSSLIAHMEERVRE

Query:  LD
        +D
Subjt:  LD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGGACAATACAATTGAGCAAGACCTACGTTGACAAACTTGTTGAGATTGAGGAACAACTGCTATTCCTGAGGGTTTCAGACAATCTTCGATATGTTGAATCTTC
GATGGATGAGATCTCCAACAAAGCTGGCATAATTGATGTCGTGAATGCCAGTATAAATGGGCTTGCTATACGTGAGTTGGTGTTGAGGGAGACCCTAGAGGACAAGGTTA
AACGAACTGATAACTTTAGATGTGGTGAAAACTCGTCGAGTTTGATTGCCCACATGGAGGAGCGCGTCAGAGAATTGGAC
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGGACAATACAATTGAGCAAGACCTACGTTGACAAACTTGTTGAGATTGAGGAACAACTGCTATTCCTGAGGGTTTCAGACAATCTTCGATATGTTGAATCTTC
GATGGATGAGATCTCCAACAAAGCTGGCATAATTGATGTCGTGAATGCCAGTATAAATGGGCTTGCTATACGTGAGTTGGTGTTGAGGGAGACCCTAGAGGACAAGGTTA
AACGAACTGATAACTTTAGATGTGGTGAAAACTCGTCGAGTTTGATTGCCCACATGGAGGAGCGCGTCAGAGAATTGGAC
Protein sequenceShow/hide protein sequence
MSRTIQLSKTYVDKLVEIEEQLLFLRVSDNLRYVESSMDEISNKAGIIDVVNASINGLAIRELVLRETLEDKVKRTDNFRCGENSSSLIAHMEERVRELD