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MC04g0873 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0873
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationMC04:14600753..14601244
RNA-Seq ExpressionMC04g0873
SyntenyMC04g0873
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057652.1 hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa]2.51e-1631.47Show/hide
Query:  VRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRAMMV
        V GK V F    IN  +GL      + + +  +P +  +E+A + +  P   W +  TGK  L   N+N +A +W+  VKN + PT H+S+I     M+V
Subjt:  VRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRAMMV

Query:  YILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA
        Y +M+ +  N  E+I   I + ++       FS LI +LC +A
Subjt:  YILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.60e-1628.21Show/hide
Query:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS
        Y + +  + D V VRG  V      INT YGL D+ +   +E +   ++ ++      +      W VS+ G  +    ++N  A +W + +K+RL+PT+
Subjt:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS

Query:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA
        H   + + R +++Y ++ G   N G +I  EI +C  +  G L F  LI  +C  A
Subjt:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.13e-5474.05Show/hide
Query:  VVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRA
        + RV   +VK   + IN + G  D   V GNE+LVHPSDEQVEEARRLICRPHK WT+ST GKLSLKPL+INEQATVWMYVVKNRLIPTS++SSIKRNRA
Subjt:  VVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRA

Query:  MMVYILMKGIEFNFGELIRNEIRSCLEKMLG
        M+VYIL+KG+EFNFGELIRNEI+SC EK+ G
Subjt:  MMVYILMKGIEFNFGELIRNEIRSCLEKMLG

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]3.16e-2467.12Show/hide
Query:  VWMYVVKNRLIPTSHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE
        +W YVVKN LI TS++SSI++ R M+VYILMKGIEFNF ELIRNEI  C EKM+GPL+F   I ELC +A VE
Subjt:  VWMYVVKNRLIPTSHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]2.52e-1628.4Show/hide
Query:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS
        Y        D V ++G +V F    IN  Y + D+ +  GN+++  P +E++E+A R + +    W+VS  G  +L    +  +A +W+Y+VK R+IPTS
Subjt:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS

Query:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKM----------------LGPLVFS
        H+ ++ R+R M  Y +  GI  +   LI  + +   ++                 LGPL F+
Subjt:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKM----------------LGPLVFS

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)1.26e-1628.21Show/hide
Query:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS
        Y + +  + D V VRG  V      INT YGL D+ +   +E +   ++ ++      +      W VS+ G  +    ++N  A +W + +K+RL+PT+
Subjt:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTS

Query:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA
        H   + + R +++Y ++ G   N G +I  EI +C  +  G L F  LI  +C  A
Subjt:  HNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA

A0A5D3D7L3 Uncharacterized protein1.22e-1631.47Show/hide
Query:  VRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRAMMV
        V GK V F    IN  +GL      + + +  +P +  +E+A + +  P   W +  TGK  L   N+N +A +W+  VKN + PT H+S+I     M+V
Subjt:  VRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRAMMV

Query:  YILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA
        Y +M+ +  N  E+I   I + ++       FS LI +LC +A
Subjt:  YILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQA

A0A6A3ASF6 Uncharacterized protein5.31e-1628.75Show/hide
Query:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEA-RRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPT
        Y + SK N   + VRGK + F  + IN ++ L +V  V G+ +L   +D    +     +C  +  W    T + S+    +  +A +W + +K++L+PT
Subjt:  YNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEA-RRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPT

Query:  SHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE
        SHN+ +  +R ++++ ++     + G +I  ++  CL K    LVF  LIT LC +  VE
Subjt:  SHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220075.48e-5574.05Show/hide
Query:  VVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRA
        + RV   +VK   + IN + G  D   V GNE+LVHPSDEQVEEARRLICRPHK WT+ST GKLSLKPL+INEQATVWMYVVKNRLIPTS++SSIKRNRA
Subjt:  VVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSIKRNRA

Query:  MMVYILMKGIEFNFGELIRNEIRSCLEKMLG
        M+VYIL+KG+EFNFGELIRNEI+SC EK+ G
Subjt:  MMVYILMKGIEFNFGELIRNEIRSCLEKMLG

A0A6J1E204 uncharacterized protein LOC1110257021.53e-2467.12Show/hide
Query:  VWMYVVKNRLIPTSHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE
        +W YVVKN LI TS++SSI++ R M+VYILMKGIEFNF ELIRNEI  C EKM+GPL+F   I ELC +A VE
Subjt:  VWMYVVKNRLIPTSHNSSIKRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAATCAAGCTACAACAGTGAGTCTAAGTCAAATGGAGACGTAGTGAGAGTACGAGGTAAAGTGGTAAAATTTTTGCGTTCCATTATTAACACTCACTATGGTTT
GTTGGATGTATTTAATGTCGTAGGTAATGAAGTTTTGGTGCATCCATCTGATGAGCAAGTGGAGGAGGCGCGTCGCCTTATTTGTAGACCACACAAGGCATGGACCGTCT
CGACAACTGGAAAGCTTTCCCTAAAGCCTCTTAACATCAATGAACAAGCAACGGTTTGGATGTATGTGGTGAAGAATAGATTGATCCCCACTTCTCACAATTCCTCCATT
AAGCGCAATAGGGCGATGATGGTGTACATCCTGATGAAGGGCATTGAGTTCAATTTTGGCGAACTCATAAGGAACGAGATTCGGAGTTGCTTGGAGAAAATGCTAGGTCC
ACTTGTTTTTTCTGGATTAATAACTGAGTTATGCTTCCAGGCAGACGTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAATCAAGCTACAACAGTGAGTCTAAGTCAAATGGAGACGTAGTGAGAGTACGAGGTAAAGTGGTAAAATTTTTGCGTTCCATTATTAACACTCACTATGGTTT
GTTGGATGTATTTAATGTCGTAGGTAATGAAGTTTTGGTGCATCCATCTGATGAGCAAGTGGAGGAGGCGCGTCGCCTTATTTGTAGACCACACAAGGCATGGACCGTCT
CGACAACTGGAAAGCTTTCCCTAAAGCCTCTTAACATCAATGAACAAGCAACGGTTTGGATGTATGTGGTGAAGAATAGATTGATCCCCACTTCTCACAATTCCTCCATT
AAGCGCAATAGGGCGATGATGGTGTACATCCTGATGAAGGGCATTGAGTTCAATTTTGGCGAACTCATAAGGAACGAGATTCGGAGTTGCTTGGAGAAAATGCTAGGTCC
ACTTGTTTTTTCTGGATTAATAACTGAGTTATGCTTCCAGGCAGACGTGGAG
Protein sequenceShow/hide protein sequence
MFESSYNSESKSNGDVVRVRGKVVKFLRSIINTHYGLLDVFNVVGNEVLVHPSDEQVEEARRLICRPHKAWTVSTTGKLSLKPLNINEQATVWMYVVKNRLIPTSHNSSI
KRNRAMMVYILMKGIEFNFGELIRNEIRSCLEKMLGPLVFSGLITELCFQADVE