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MC04g0880 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0880
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationMC04:15207595..15207819
RNA-Seq ExpressionMC04g0880
SyntenyMC04g0880
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]2.07e-3492Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWEDD
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDE+EYEGDGSDHWEDD
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWEDD

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]1.07e-1154.05Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      + YEGD SDH ED
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]2.49e-1356.76Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      + YEGD SDH ED
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]2.53e-1356.76Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      + YEGD SDH ED
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]7.79e-1254.05Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED
        M N  D  +I+DAR REA + T++R+IR +E LT+RIGRLE QNQA++R+P P P      + YEGD SDH ED
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein9.44e-0844.87Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEEEYEGDGSDHWEDD
        M N  DE  +     REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++ + EGDGSD  +DD
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEEEYEGDGSDHWEDD

A0A5D3CHG3 Retrotrans_gag domain-containing protein7.55e-0449.06Show/hide
Query:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEEEYEGDGSDHWEDD
        MI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++ + EGDGSD  +DD
Subjt:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEEEYEGDGSDHWEDD

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241151.00e-3492Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWEDD
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDE+EYEGDGSDHWEDD
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWEDD

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699485.16e-1254.05Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      + YEGD SDH ED
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGAT
AGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGAAGAGTATGAAGGTGATGGATCCGATCATTGGGAGG
ACGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGAT
AGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGAAGAGTATGAAGGTGATGGATCCGATCATTGGGAGG
ACGAT
Protein sequenceShow/hide protein sequence
MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEEEYEGDGSDHWEDD