CuGenDBv2

Gene ID	MC04g0905
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	MC04:16484366..16484536
RNA-Seq Expression	MC04g0905
Synteny	MC04g0905
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KJB10022.1 hypothetical protein B456_001G180600, partial [Gossypium raimondii]

1.83e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

OMP13198.1 Photosystem I PsaA/PsaB [Corchorus olitorius]

3.41e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

VDD24445.1 unnamed protein product [Brassica rapa]

7.13e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

VDD65349.1 unnamed protein product [Brassica oleracea]

6.16e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

VDD65627.1 unnamed protein product [Brassica oleracea]

1.27e-33

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

TrEMBL top hits

e value

%identity

Alignment

A0A0D2M066 Uncharacterized protein (Fragment)

8.87e-35

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A0A1J3JDJ4 Uncharacterized protein (Fragment)

6.44e-35

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A0A1R3L1N9 Photosystem I PsaA/PsaB

1.65e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A0A3P6HHE4 Uncharacterized protein

2.98e-34

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A0A453SG27 Uncharacterized protein

2.79e-34

98.25

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLG+YVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-27

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A4QJB4 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-27

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-27

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

Q33332 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-27

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

Q3V535 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-27

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.1e-28

100

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.1e-15

53.23

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILIEPIFAQWIQSAH
        +L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I ++P+FAQWIQ+ H
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILIEPIFAQWIQSAH

Sequences

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CDS sequence

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ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGCCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGG
TACTCCGGAGAAACAAATCTTAATCGAACCCATATTTGCCCAATGGATTCAATCTGCTCAT

mRNA sequence

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ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGCCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGG
TACTCCGGAGAAACAAATCTTAATCGAACCCATATTTGCCCAATGGATTCAATCTGCTCAT

Protein sequence

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MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAH

MC04g0905 (gene) of Bitter gourd (Dali-11) v1 genome