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MC04g0940 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0940
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description(R)-mandelonitrile lyase-like
Genome locationMC04:17179286..17179513
RNA-Seq ExpressionMC04g0940
SyntenyMC04g0940
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0016829 - lyase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR007867 - Glucose-methanol-choline oxidoreductase, C-terminal
IPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8541557.1 hypothetical protein F0562_022709 [Nyssa sinensis]5.77e-4190.79Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        YVGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDRNFRVIGID+LR+VDGS FTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

PSS07264.1 (R)-mandelonitrile lyase-like [Actinidia chinensis var. chinensis]1.23e-3985.53Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        YVGPALPVDQSND LMG+FCR TVSTIWHYHGGCLVGKVVDR FRVIGI +LRVVDGS F VSPGTNPQ+ +LMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

THG00223.1 hypothetical protein TEA_020656 [Camellia sinensis var. sinensis]1.09e-3785.53Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +VGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDR+ RVIGID LRVVDGS FT SPGTNPQ+ +LMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

XP_027122611.1 (R)-mandelonitrile lyase-like [Coffea arabica]7.68e-4088.16Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIFTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

XP_027168687.1 (R)-mandelonitrile lyase-like [Coffea eugenioides]5.06e-4088.16Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIFTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

TrEMBL top hitse value%identityAlignment
A0A068TP29 GMC_OxRdtase_N domain-containing protein3.72e-4088.16Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIFTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

A0A2R6QF72 (R)-mandelonitrile lyase-like5.95e-4085.53Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        YVGPALPVDQSND LMG+FCR TVSTIWHYHGGCLVGKVVDR FRVIGI +LRVVDGS F VSPGTNPQ+ +LMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

A0A4S4DCA1 GMC_OxRdtase_N domain-containing protein5.29e-3885.53Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +VGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDR+ RVIGID LRVVDGS FT SPGTNPQ+ +LMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

A0A5J5BIC5 GMC_OxRdtase_N domain-containing protein2.79e-4190.79Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        YVGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDRNFRVIGID+LR+VDGS FTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

A0A6P6X6P1 (R)-mandelonitrile lyase-like3.72e-4088.16Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIFTVSPGTNPQ+ LLMLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

SwissProt top hitse value%identityAlignment
O82784 (R)-mandelonitrile lyase 45.5e-2057.33Show/hide
Query:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +G  LP +Q++D    +FCR TV++ WHYHGG +VGKV+D NFRV GI+ALRVVDGS F  +P ++PQ   LMLG
Subjt:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

P52706 (R)-mandelonitrile lyase 11.1e-2060Show/hide
Query:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +G  LP DQ++D     FCR +V++ WHYHGGCLVGKV+D +FRV GIDALRVVDGS F  +P ++PQ   LMLG
Subjt:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

Q945K2 (R)-mandelonitrile lyase 24.2e-2058.67Show/hide
Query:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +G  LP DQ++D     FCR +V++ WHYHGGCLVGKV+D +FRV GI+ALRVVDGS F  +P ++PQ   LMLG
Subjt:  VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

Q9S746 Protein HOTHEAD3.2e-2058.57Show/hide
Query:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGTNPQ+ ++M+G
Subjt:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

Q9SSM2 (R)-mandelonitrile lyase-like2.7e-2768.42Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +VG  LPVDQSND +M +FCR TVSTIWHYHGG +VGKVVD + +VIG+++LR+VDGS F +SPGTNPQ+ L+MLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

Arabidopsis top hitse value%identityAlignment
AT1G72970.1 Glucose-methanol-choline (GMC) oxidoreductase family protein2.3e-2158.57Show/hide
Query:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGTNPQ+ ++M+G
Subjt:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

AT1G72970.2 Glucose-methanol-choline (GMC) oxidoreductase family protein2.3e-2158.57Show/hide
Query:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGTNPQ+ ++M+G
Subjt:  PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.9e-2868.42Show/hide
Query:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +VG  LPVDQSND +M +FCR TVSTIWHYHGG +VGKVVD + +VIG+++LR+VDGS F +SPGTNPQ+ L+MLG
Subjt:  YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

AT5G51950.1 Glucose-methanol-choline (GMC) oxidoreductase family protein3.9e-2169.49Show/hide
Query:  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +FC  TV TIWHYHGGC VG+VVD+N+RV+GID+LRV+DGS F  SPGTNPQ+ ++MLG
Subjt:  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

AT5G51950.2 Glucose-methanol-choline (GMC) oxidoreductase family protein3.9e-2169.49Show/hide
Query:  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG
        +FC  TV TIWHYHGGC VG+VVD+N+RV+GID+LRV+DGS F  SPGTNPQ+ ++MLG
Subjt:  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCTCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGG
CAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTCGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGA
TGCTTGGA
mRNA sequenceShow/hide mRNA sequence
TACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCTCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGG
CAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTCGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGA
TGCTTGGA
Protein sequenceShow/hide protein sequence
YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG