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MC04g1082 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1082
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC04:18906718..18906900
RNA-Seq ExpressionMC04g1082
SyntenyMC04g1082
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.24e-1246.67Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R+IN +  +Q  M  + L P WCVLC+K +E+  HL LHCE
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
KAA0050814.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.27e-1245Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R++N +  IQ  M    L P WCVLC+K +ET  HL  HC+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.06e-1142.62Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCEF
        LW S  P+KCKFFI  +  +++N +  IQ     + LNP WC+ CR  NE ++HL + C F
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCEF
KAA0058554.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.91e-1245Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R++N +  IQ  M    L P WCVLC+K++ET  HL  HC+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
TYK11012.1 uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]2.07e-1146.67Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +RRI+ +  IQ  M    L P WCVLC K NE+ +HL L C+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
TrEMBL top hitse value%identityAlignment
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein6.01e-1346.67Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R+IN +  +Q  M  + L P WCVLC+K +E+  HL LHCE
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein9.95e-1242.62Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCEF
        LW S  P+KCKFFI  +  +++N +  IQ     + LNP WC+ CR  NE ++HL + C F
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCEF
A0A5A7UTS4 LINE-1 retrotransposable element ORF2 protein2.86e-1245Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R++N +  IQ  M    L P WCVLC+K++ET  HL  HC+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
A0A5A7UV84 Reverse transcriptase domain-containing protein1.00e-1146.67Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +RRI+ +  IQ  M    L P WCVLC K NE+ +HL L C+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
A0A5D3C9J6 LINE-1 retrotransposable element ORF2 protein2.07e-1245Show/hide
Query:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
        +W S  P K KFF+ C+ +R++N +  IQ  M    L P WCVLC+K +ET  HL  HC+
Subjt:  LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATGGGACTCTATCTATCCAAAGAAGTGTAAATTCTTCATAGGGTGTGTTACTCGTAGAAGAATCAATGCACTTTATTGGATCCAATCACCCATGAAATTCCTCTACCT
CAACCCAAAGTGGTGTGTCCTATGTAGAAAGAAGAATGAAACTTTAGATCATCTGCTCCTACATTGTGAATTC
mRNA sequenceShow/hide mRNA sequence
TTATGGGACTCTATCTATCCAAAGAAGTGTAAATTCTTCATAGGGTGTGTTACTCGTAGAAGAATCAATGCACTTTATTGGATCCAATCACCCATGAAATTCCTCTACCT
CAACCCAAAGTGGTGTGTCCTATGTAGAAAGAAGAATGAAACTTTAGATCATCTGCTCCTACATTGTGAATTC
Protein sequenceShow/hide protein sequence
LWDSIYPKKCKFFIGCVTRRRINALYWIQSPMKFLYLNPKWCVLCRKKNETLDHLLLHCEF