; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1083 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1083
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationMC04:18918497..18919486
RNA-Seq ExpressionMC04g1083
SyntenyMC04g1083
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]3.76e-203100Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME
        APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME

Query:  DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG
        DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG
Subjt:  DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG

Query:  NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
Subjt:  NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

XP_022153955.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]3.78e-12569.49Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDM
        APRS+   +EVWS NL EELELLNEY+PEF VV ID+      W   + I        LR + + RLNILQLGLTL DQK N+AMT EFNFRDFDH+SDM
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDM

Query:  EDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLD
        + +S LD FLKN GFDFYKLKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+I YLLK LKIK IPI MATFA TAQHLLG +S+LKHMARYCDGLLD
Subjt:  EDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLD

Query:  GNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        GNL LKK AKLLDVKRI  AHFA  D+L T S+YTKMKQ+FKLPLEQCEGFLY LP+ I  F S+ KII+PS
Subjt:  GNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]2.37e-15774.33Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPG-----------------------------FLWCTPKGISEEEFYHCLRFNVNRLNILQL
        APRS+  NREVWS NL +ELE+LNEYLPEFP+V ID EFPG                             FL  TPKG+SEEEFY CLRFNVNRLNILQL
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPG-----------------------------FLWCTPKGISEEEFYHCLRFNVNRLNILQL

Query:  GLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMA
        GLTLA+Q GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFYKLK+ GIA EDFTTLFLPICRSG+I+RWITFHGFYDI YLLKLLKIK IPISMA
Subjt:  GLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMA

Query:  TFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        TFA TAQHLLGTVSDLKHM RYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T +VYTKMKQ+FK+P+EQ EGFLYGLP+ I  FQ + KI+DPS
Subjt:  TFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]7.03e-12265.4Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWS NL EE+EL+  YL EFP+V ID EFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D  G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA
        LKNKGF+F KL+  GIA ++F+  F P+ RSG+I++WITFHG YDI YL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +GNLGLKKLA
Subjt:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA

Query:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        KLL + R+  AHFA SD+L T SVY KMK I K+  +  EGFLYGLPYPI G++    I+DPS
Subjt:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]9.31e-12265.78Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWS NL EE+EL+  YL EFP+V +D EFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D+ G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA
        LKNKGF+F KL+  GIA E+F+  F P+ RS +I+RWITFHG YDI YL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +GNLGLKKLA
Subjt:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA

Query:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        KLL + RI  AHFA SD+L T SVY KMK I K+  +  EGFLYGLPYPI G++    I+DPS
Subjt:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease1.82e-203100Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME
        APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDME

Query:  DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG
        DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG
Subjt:  DVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDG

Query:  NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
Subjt:  NLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

A0A6J1DIB1 putative CCR4-associated factor 1 homolog 81.83e-12569.49Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDM
        APRS+   +EVWS NL EELELLNEY+PEF VV ID+      W   + I        LR + + RLNILQLGLTL DQK N+AMT EFNFRDFDH+SDM
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDM

Query:  EDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLD
        + +S LD FLKN GFDFYKLKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+I YLLK LKIK IPI MATFA TAQHLLG +S+LKHMARYCDGLLD
Subjt:  EDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLD

Query:  GNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        GNL LKK AKLLDVKRI  AHFA  D+L T S+YTKMKQ+FKLPLEQCEGFLY LP+ I  F S+ KII+PS
Subjt:  GNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

A0A6J1DLA5 Poly(A)-specific ribonuclease1.15e-15774.33Show/hide
Query:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPG-----------------------------FLWCTPKGISEEEFYHCLRFNVNRLNILQL
        APRS+  NREVWS NL +ELE+LNEYLPEFP+V ID EFPG                             FL  TPKG+SEEEFY CLRFNVNRLNILQL
Subjt:  APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPG-----------------------------FLWCTPKGISEEEFYHCLRFNVNRLNILQL

Query:  GLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMA
        GLTLA+Q GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFYKLK+ GIA EDFTTLFLPICRSG+I+RWITFHGFYDI YLLKLLKIK IPISMA
Subjt:  GLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMA

Query:  TFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        TFA TAQHLLGTVSDLKHM RYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T +VYTKMKQ+FK+P+EQ EGFLYGLP+ I  FQ + KI+DPS
Subjt:  TFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

A0A6J1ESM7 Poly(A)-specific ribonuclease3.40e-12265.4Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWS NL EE+EL+  YL EFP+V ID EFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D  G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA
        LKNKGF+F KL+  GIA ++F+  F P+ RSG+I++WITFHG YDI YL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +GNLGLKKLA
Subjt:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA

Query:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS
        KLL + R+  AHFA SD+L T SVY KMK I K+  +  EGFLYGLPYPI G++    I+DPS
Subjt:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS

A0A6J1HRD6 Poly(A)-specific ribonuclease2.81e-12064.89Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        R+VWS NL EE+EL+   L EFP+V +D EFPGFL CTPKG+S+EEFY CL+FNVNRL+ILQLGLTL D+ G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA
        LKNKGF+F  L+  GI+ E+F+  F PI RSG+I+RWITFHG YDI YL+K   I  +P SM+ FA  A HLLGTV+DLKHMARY D LL+GNLGLKKLA
Subjt:  LKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLA

Query:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDP
        K+L V RI  AHFA SD+L T SVY KM+ I K+  +  EGFLYGLPYPI G++    I+DP
Subjt:  KLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDP

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 91.4e-3634.22Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTP-KGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI---------AMTWEFNFRDFDHVSD
        REVW+ NL  E EL++E + ++P + +D EFPG ++ +  +  + ++ Y  L+ NV+ L+++Q+GLTL+D  GN+            WEFNFRDFD   D
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTP-KGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI---------AMTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLP---ICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLG-TVSDLKHMARYC
             S++  L+ +G DF +  + G+  E F  L +    +C   +   W+TFH  YD  YL+K+L  + +P ++  F    + L G  V D+KHM ++C
Subjt:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLP---ICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLG-TVSDLKHMARYC

Query:  DGLLDGNLGLKKLAKLLDVKR-IDNAHFACSDNLFTTSVYTKMKQIFKLP--LEQCEGFLYGL
        +  L G  GL ++A+ L+V R +   H A SD+L T   + +M+ ++ +    E+  G LYGL
Subjt:  DGLLDGNLGLKKLAKLLDVKR-IDNAHFACSDNLFTTSVYTKMKQIFKLP--LEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 25.9e-4037.08Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF
        REVW+ NL +E+ L+ + + +FP V +D EFPG +  T        P  I  E  Y  L+ NVN L ++QLGLTL+D+KGN+          W+FNFR+F
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF

Query:  DHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMA
        + +SDM  + S++  L+    D  K  + G+  + F  L +   +  + +I  W+TFH  YD  YLLKLL  K +P  ++ F    +     V D+K++ 
Subjt:  DHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMA

Query:  RYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGLPYP
         +C  L     GL+K+A+LL VKR+  +H A SD+L T   + KMK+ F    L +  GFL+GL  P
Subjt:  RYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGLPYP

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.6e-4038.31Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL+EE++L+ + + +FP V +D EFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  K    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC

Query:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        + L   + GL KLA+LL+V+R+   H A SD+L T+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 14.2e-3835.08Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        R VW  N+ EE+  + E L  FP++  D E+PG ++ T    S +E Y  ++ NV    ++Q G TL + KG I   WE NF +F   SD  +  S++ F
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYKLKKYGIAQ--EDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKK
        L+  G D  K++  G+      F    + + RS +   ++TF G YD  Y L +L    +P +   FAT    + G V D K MA +C+GL + +LGL K
Subjt:  LKNKGFDFYKLKKYGIAQ--EDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKK

Query:  LAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGL
        LA+LL + R+  AH A SD+L T  V+ K+K +++       G +YG+
Subjt:  LAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.7e-4238.55Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS
        REVW+ NL  E+ L+ E + +FP V +D EFPG + C P G    + E  Y  L+ NVN L ++QLGLT +D+KGN+           W+FNFR+FD  S
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS

Query:  DMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARY
        D+    S++  L+  G DF K  ++GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P +   F          V D+KH+ ++
Subjt:  DMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARY

Query:  CDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        C+ L   + GL KLA+LLDV+R+   H A SD+L T+  + K+++ F +  +E+  G LYGL
Subjt:  CDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.2e-4137.08Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF
        REVW+ NL +E+ L+ + + +FP V +D EFPG +  T        P  I  E  Y  L+ NVN L ++QLGLTL+D+KGN+          W+FNFR+F
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF

Query:  DHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMA
        + +SDM  + S++  L+    D  K  + G+  + F  L +   +  + +I  W+TFH  YD  YLLKLL  K +P  ++ F    +     V D+K++ 
Subjt:  DHVSDMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMA

Query:  RYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGLPYP
         +C  L     GL+K+A+LL VKR+  +H A SD+L T   + KMK+ F    L +  GFL+GL  P
Subjt:  RYCDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGLPYP

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4138.31Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL+EE++L+ + + +FP V +D EFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  K    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC

Query:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        + L   + GL KLA+LL+V+R+   H A SD+L T+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4138.31Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL+EE++L+ + + +FP V +D EFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  K    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC

Query:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        + L   + GL KLA+LL+V+R+   H A SD+L T+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4138.31Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL+EE++L+ + + +FP V +D EFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  K    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYC

Query:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        + L   + GL KLA+LL+V+R+   H A SD+L T+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-4338.55Show/hide
Query:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS
        REVW+ NL  E+ L+ E + +FP V +D EFPG + C P G    + E  Y  L+ NVN L ++QLGLT +D+KGN+           W+FNFR+FD  S
Subjt:  REVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS

Query:  DMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARY
        D+    S++  L+  G DF K  ++GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P +   F          V D+KH+ ++
Subjt:  DMEDVSSLDSFLKNKGFDFYKLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARY

Query:  CDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL
        C+ L   + GL KLA+LLDV+R+   H A SD+L T+  + K+++ F +  +E+  G LYGL
Subjt:  CDGLLDGNLGLKKLAKLLDVKRIDNAHFACSDNLFTTSVYTKMKQIFKL-PLEQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCCAAGATCCATCTGCCATAATCGAGAGGTTTGGTCTCTCAATCTCCGTGAAGAATTAGAGCTGTTGAATGAGTATCTTCCAGAGTTTCCAGTAGTCGTCATCGATAT
GGAGTTTCCAGGATTTCTCTGGTGCACTCCGAAAGGCATCTCGGAGGAAGAATTCTACCATTGTCTCCGATTCAATGTGAACCGATTGAACATACTCCAACTCGGTCTCA
CACTTGCCGATCAGAAGGGAAATATAGCAATGACTTGGGAGTTTAACTTCAGAGATTTTGATCACGTTAGCGATATGGAAGACGTTTCTTCGCTGGATTCATTTCTGAAG
AACAAAGGGTTTGATTTCTACAAATTGAAGAAATACGGAATAGCTCAAGAGGATTTCACTACCTTGTTTCTACCAATATGTCGTAGTGGTCAAATCAAGAGATGGATCAC
ATTTCACGGCTTCTACGACATTACTTATCTTCTCAAGCTGCTCAAAATCAAATCCATACCGATTTCCATGGCAACGTTTGCCACCACCGCTCAACATCTATTAGGTACGG
TTAGCGATCTGAAGCATATGGCTCGCTACTGTGATGGACTGCTCGACGGCAACCTAGGGCTAAAAAAATTGGCCAAGCTGCTCGACGTGAAGCGTATAGACAATGCACAT
TTTGCTTGTTCCGATAATTTATTCACAACTTCAGTATACACCAAGATGAAGCAAATTTTCAAGCTTCCGCTAGAGCAATGCGAAGGGTTTCTCTATGGCTTGCCTTATCC
GATTAACGGTTTTCAGTCAGTCGCGAAGATTATCGATCCATCC
mRNA sequenceShow/hide mRNA sequence
GCTCCAAGATCCATCTGCCATAATCGAGAGGTTTGGTCTCTCAATCTCCGTGAAGAATTAGAGCTGTTGAATGAGTATCTTCCAGAGTTTCCAGTAGTCGTCATCGATAT
GGAGTTTCCAGGATTTCTCTGGTGCACTCCGAAAGGCATCTCGGAGGAAGAATTCTACCATTGTCTCCGATTCAATGTGAACCGATTGAACATACTCCAACTCGGTCTCA
CACTTGCCGATCAGAAGGGAAATATAGCAATGACTTGGGAGTTTAACTTCAGAGATTTTGATCACGTTAGCGATATGGAAGACGTTTCTTCGCTGGATTCATTTCTGAAG
AACAAAGGGTTTGATTTCTACAAATTGAAGAAATACGGAATAGCTCAAGAGGATTTCACTACCTTGTTTCTACCAATATGTCGTAGTGGTCAAATCAAGAGATGGATCAC
ATTTCACGGCTTCTACGACATTACTTATCTTCTCAAGCTGCTCAAAATCAAATCCATACCGATTTCCATGGCAACGTTTGCCACCACCGCTCAACATCTATTAGGTACGG
TTAGCGATCTGAAGCATATGGCTCGCTACTGTGATGGACTGCTCGACGGCAACCTAGGGCTAAAAAAATTGGCCAAGCTGCTCGACGTGAAGCGTATAGACAATGCACAT
TTTGCTTGTTCCGATAATTTATTCACAACTTCAGTATACACCAAGATGAAGCAAATTTTCAAGCTTCCGCTAGAGCAATGCGAAGGGTTTCTCTATGGCTTGCCTTATCC
GATTAACGGTTTTCAGTCAGTCGCGAAGATTATCGATCCATCC
Protein sequenceShow/hide protein sequence
APRSICHNREVWSLNLREELELLNEYLPEFPVVVIDMEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLK
NKGFDFYKLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDITYLLKLLKIKSIPISMATFATTAQHLLGTVSDLKHMARYCDGLLDGNLGLKKLAKLLDVKRIDNAH
FACSDNLFTTSVYTKMKQIFKLPLEQCEGFLYGLPYPINGFQSVAKIIDPS