; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1117 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1117
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCoiled-coil domain-containing protein 86
Genome locationMC04:19227650..19228495
RNA-Seq ExpressionMC04g1117
SyntenyMC04g1117
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR005579 - Cgr1-like
IPR026570 - Coiled-coil domain-containing protein 86


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143761.1 protein PXR1 [Cucumis sativus]2.61e-10489.12Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SL I +SENAD  MEID+S PPP AKRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]2.73e-10690.16Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SL I +SENAD +MEID+S PPP AKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_022141739.1 protein PXR1 [Momordica charantia]4.85e-123100Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_022939634.1 protein PXR1 [Cucurbita moschata]2.44e-10489.58Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRKRE  EA++SLNI  SENADASM++DES PP  KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM 
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_038874831.1 protein PXR1 [Benincasa hispida]2.75e-10891.15Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SLNI +SENAD SMEID+S PPP+KRSAIPSSENPDKPTF NPTYDGVIAGKVSGRKWKQPRKHR SAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QK IKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
TrEMBL top hitse value%identityAlignment
A0A0A0KNG5 Coiled-coil domain-containing protein 861.26e-10489.12Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SL I +SENAD  MEID+S PPP AKRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A1S3CP36 Coiled-coil domain-containing protein 861.32e-10690.16Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SL I +SENAD +MEID+S PPP AKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A5D3BKZ5 Coiled-coil domain-containing protein 861.32e-10690.16Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRKRE  EA+ SL I +SENAD +MEID+S PPP AKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPP-AKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A6J1CIY7 Coiled-coil domain-containing protein 862.35e-123100Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A6J1FHS9 Coiled-coil domain-containing protein 861.18e-10489.58Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRKRE  EA++SLNI  SENADASM++DES PP  KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM 
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31410.1 unknown protein1.4e-5464.95Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRAS
        MACT+DFRCLDEGFGGKTYKRKRE +E   +  I D    +ASM+ID + PP AKRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRAS

Query:  AMQVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDFI
           V  +    EE ++Q+ IK A++ER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +PD+ +
Subjt:  AMQVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDFI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCACCATCGACTTCCGGTGCCTGGACGAGGGATTCGGGGGAAAAACCTACAAGCGAAAACGGGAACGGGAAGAAGCTCAGAACAGCCTCAACATCAACGACTC
TGAAAATGCCGACGCCTCCATGGAGATCGACGAATCCTTTCCGCCGCCGGCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCCGACAAACCGACATTCGGAAATCCTA
CCTACGACGGCGTTATCGCCGGAAAGGTCTCGGGACGGAAGTGGAAGCAGCCGAGGAAGCACAGGGCGTCTGCCATGCAGGTGAGCCGGAAAGGCACTACGTTCGAGGAG
AGGGAGAAGCAGAAGATGATTAAGGCGGCGTTTAGGGAGCGCAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAAGAGAAAGAAGAGAGAGGAGAGGGA
GAAGAAGAAGAAGGAGAACATCTTGAGATCTGGAACTAAGCTACAGAAGATAACTAATCCCAAGACACTCAAGAAGATTGCCAAGTCTAAGCAGAAGAAACTCCTTAAGG
TTGTTCCTGACGATTTCATCAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCACCATCGACTTCCGGTGCCTGGACGAGGGATTCGGGGGAAAAACCTACAAGCGAAAACGGGAACGGGAAGAAGCTCAGAACAGCCTCAACATCAACGACTC
TGAAAATGCCGACGCCTCCATGGAGATCGACGAATCCTTTCCGCCGCCGGCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCCGACAAACCGACATTCGGAAATCCTA
CCTACGACGGCGTTATCGCCGGAAAGGTCTCGGGACGGAAGTGGAAGCAGCCGAGGAAGCACAGGGCGTCTGCCATGCAGGTGAGCCGGAAAGGCACTACGTTCGAGGAG
AGGGAGAAGCAGAAGATGATTAAGGCGGCGTTTAGGGAGCGCAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAAGAGAAAGAAGAGAGAGGAGAGGGA
GAAGAAGAAGAAGGAGAACATCTTGAGATCTGGAACTAAGCTACAGAAGATAACTAATCCCAAGACACTCAAGAAGATTGCCAAGTCTAAGCAGAAGAAACTCCTTAAGG
TTGTTCCTGACGATTTCATCAAGAAATAGGTTCGTCGCTTCTGTGCTAAGTCCATTTTGAGCTTTTTATCCTCCATGTTTTCAGTATCATAGATAGATTTCTCTGCTTTT
CTTAAATTTTGGAATTTTGGCTGAATTTTGCTGTATCATTTGTTCGAAACGAAATACATAACAGTTTAGAAAATCAAATATAATATCTTCCTTTCTTGTTGTTGATTCTT
TTTTTTTTCTTCCATTGAGAACATCTACACACTTCAATGGGTATTTTAATAGATATTTTGCTCATGTTTGTTGCGG
Protein sequenceShow/hide protein sequence
MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDESFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVSRKGTTFEE
REKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK