CuGenDBv2

Gene ID	MC04g1124
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L2, chloroplastic
Genome location	MC04:19299794..19299934
RNA-Seq Expression	MC04g1124
Synteny	MC04g1124
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR002171 - Ribosomal protein L2 IPR008991 - Translation protein SH3-like domain superfamily IPR014726 - Ribosomal protein L2, domain 3 IPR022669 - Ribosomal protein L2, C-terminal IPR022671 - Ribosomal protein L2, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

CAA7013030.1 unnamed protein product, partial [Microthlaspi erraticum]

2.82e-24

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

KAB2017020.1 hypothetical protein ES319_D08G131500v1, partial [Gossypium barbadense]

3.38e-24

93.62

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNP+DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

KDP30739.1 hypothetical protein JCGZ_15168 [Jatropha curcas]

1.29e-24

97.87

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

OMP12525.1 Ribosomal protein L2 [Corchorus olitorius]

2.38e-24

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

TYG57423.1 hypothetical protein ES288_D08G140100v1 [Gossypium darwinii]

3.48e-24

93.62

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNP+DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

TrEMBL top hits

e value

%identity

Alignment

A0A067KG04 Ribosomal_L2_C domain-containing protein

6.23e-25

97.87

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

A0A1R3KZK2 Ribosomal protein L2

1.15e-24

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

A0A5D2BMU1 Ribosomal_L2_C domain-containing protein

1.68e-24

93.62

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNP+DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

A0A5J5QFK0 Ribosomal_L2_C domain-containing protein (Fragment)

1.64e-24

93.62

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNP+DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

A0A6D2HFA4 Ribosomal_L2_C domain-containing protein (Fragment)

1.36e-24

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

SwissProt top hits

e value

%identity

Alignment

A6MMG4 50S ribosomal protein L2-A, chloroplastic

2.6e-20

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

A6MMI6 50S ribosomal protein L2-B, chloroplastic

2.6e-20

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

B1NWJ1 50S ribosomal protein L2, chloroplastic

6.9e-21

97.87

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

Q0G9F5 50S ribosomal protein L2-A, chloroplastic

2.6e-20

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

Q14F95 50S ribosomal protein L2-A, chloroplastic

2.6e-20

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

Arabidopsis top hits

e value

%identity

Alignment

AT2G44065.1 Ribosomal protein L2 family

2.1e-09

57.45

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        C AT+G V N     K L +AG   WLG RP VRGV MNP DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

AT2G44065.2 Ribosomal protein L2 family

2.1e-09

57.45

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        C AT+G V N     K L +AG   WLG RP VRGV MNP DHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

AT3G51190.1 Ribosomal protein L2 family

2.9e-06

46.43

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Query:  CSATVGQVGNTGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPPGG
        C A +GQV   G  +K L +AG+          CW    PVVRGV MNPV+HP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPPGG

ATCG00830.1 ribosomal protein L2

1.9e-21

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

ATCG01310.1 ribosomal protein L2

1.9e-21

95.74

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Query:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG
        CSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHP GG
Subjt:  CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

Sequences

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CDS sequence

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TGCTCAGCAACAGTCGGACAAGTGGGGAATACTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGT
TATGAACCCTGTAGACCATCCCCCGGGAGGG

mRNA sequence

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TGCTCAGCAACAGTCGGACAAGTGGGGAATACTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGT
TATGAACCCTGTAGACCATCCCCCGGGAGGG

Protein sequence

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CSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPPGG

MC04g1124 (gene) of Bitter gourd (Dali-11) v1 genome