; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1130 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1130
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionATP-dependent DNA helicase At3g02060, chloroplastic
Genome locationMC04:19342420..19357390
RNA-Seq ExpressionMC04g1130
SyntenyMC04g1130
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0060149 - negative regulation of posttranscriptional gene silencing (biological process)
GO:0010587 - miRNA catabolic process (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0006281 - DNA repair (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0004534 - 5'-3' exoribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR003711 - CarD-like/TRCF domain
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036101 - CarD-like/TRCF domain superfamily
IPR037235 - TRCF-like, C-terminal D7 domai


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150202.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus]0.092.72Show/hide
Query:  LLSPAPDVSTFRPLVAFRLGSFP--RQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        LLSPAPDVS+  P++ F+L SFP  R W LFNRN T R  P RC+S+TNVVYAEDV+VPGTAKS+RRR+QIELERDSIS+LNER+ R+HGKR+SSRTAMD
Subjt:  LLSPAPDVSTFRPLVAFRLGSFP--RQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGDRQR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE IEYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNE KRPRTLSKLNDT+TWEKRKTKGK+AIQKMVVDLMELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVEKDLT RETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMET MN+KVFKLI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHAS PALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

XP_008465367.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo]0.092.23Show/hide
Query:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        L SPAPDVS+ RPL+AF+L SFP  W   LFNRNCT R  P RC+SVTNV YAEDV+VPGTAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD
Subjt:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNE ++PRTLSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MN+KVF+LI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNW+FECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

XP_022141422.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Momordica charantia]0.0100Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

XP_023529599.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita pepo subsp. pepo]0.092.35Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        MALL P   VS+ RPLVAFRLGSFP+ W LFNRNC LR C KRC+S+TNVVYAEDVMVPG AKSARRREQIELE DSI++LNER+RR+H KRESS+TAM+
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKG+RQ+ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIEYADGMAKL VKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNE KRPRTLSKLNDT+TWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTK+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMN+KVFKLI++SM SEVH+NCL+FEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

XP_038907244.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispida]0.093.33Show/hide
Query:  MALL-SPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAM
        MALL SPAPDVS+ RPLVAF+LGSFP    LFNRN T R  PKR +S+TNV+YAEDV+VPG AKSARRREQIELERDSISILNER+RR+HGKRESSRT M
Subjt:  MALL-SPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAM

Query:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYR
        D+EEADRYIQMVKEQQQRGLQKLKGDRQR +SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYR
Subjt:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYR

Query:  YNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG
        YNLPNE KRPRTLSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLT+RETPMDRLICG
Subjt:  YNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLV
        DVGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFS FPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+ LGLLV
Subjt:  DVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAI+YELERGGQVFYVLPRIKGLEEVK+
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
        FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++AL
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL

Query:  ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGA
        ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGA
Subjt:  ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGA

Query:  EKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELP
        E AAETDIW LMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MN+KVFKLI+DSMTSEVH+NCLSFEEH IKAGLLLELP
Subjt:  EKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELP

Query:  KEQLLNWIFECLVELHASLPALIKY
        +EQLLNWIFECLVELHASLPALIKY
Subjt:  KEQLLNWIFECLVELHASLPALIKY

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ6 ATP-dependent DNA helicase At3g02060, chloroplastic0.092.23Show/hide
Query:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        L SPAPDVS+ RPL+AF+L SFP  W   LFNRNCT R  P RC+SVTNV YAEDV+VPGTAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD
Subjt:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNE ++PRTLSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MN+KVF+LI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNW+FECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

A0A5A7VIC8 ATP-dependent DNA helicase0.092.31Show/hide
Query:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        L SPAPDVS+ RPL+AF+L SFP  W   LFNRNCT R  P RC+SVTNV YAEDV+VPGTAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD
Subjt:  LLSPAPDVSTFRPLVAFRLGSFPRQWR--LFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNE K+PRTLSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAG
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MN+KVF+LI+DSMTSEVH+NCLSFEEH IK G
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAG

A0A6J1CJT5 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X10.0100Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

A0A6J1GZL7 ATP-dependent DNA helicase At3g02060, chloroplastic0.092.35Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        MALL P  DVS+ RPLVAFRLGSFP+ W LFNRNC LR   KRC+S+TNVVYAEDVMVPG AKSARRREQIELE DSI++LNER+RR+H KRESS+TAMD
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKG+RQ+ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIEYADGMAKL VKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNE KRPRTLSKLNDT+TWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVIT RFSSFPDVQIGLLSRFQTK+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKV SAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMN+KVFKLI++SM SEVH+NCL+FEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

A0A6J1JT22 ATP-dependent DNA helicase At3g02060, chloroplastic0.092.11Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD
        MALL P  DVS+ RPLVAFRLGSFP+ W LFNRNC LR C KR +S+TNVVYAEDVMV GTAKSARRREQIELERDSI++LNER+RR+H KRESS+TAMD
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY
        A EADRYIQMVKEQQQRGLQKLKG+R++ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIEYADGMAKL VKQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNE KRPRTLSKLNDT+TWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV
        VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTK+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
        LEASFPDIEI LAHGKQYSKQLEETMENF+LG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAE

Query:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK
        KAAETDIWALMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMN+KVFKLI++SM SEVH+NCL+FEEH IKAGLLLELP+
Subjt:  KAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPK

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

SwissProt top hitse value%identityAlignment
F4JFJ3 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0078.86Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAM
        M  L P PD  T  PLV  +L SFP   RLF  +  LRR  ++  S+  +V A   +    AK  R RE+ EL E DSIS+LNER+RR  GKRE++R AM
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAM

Query:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRM
        D+EEA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+KQASR+
Subjt:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRM

Query:  LYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL
        LYRYNLPNETKRPRTLS+L+DTS WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DFAAQFPY  T DQK+AF DVEKDLTERETPMDRL
Subjt:  LYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL

Query:  ICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLG
        ICGDVGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLG
Subjt:  ICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLG

Query:  LLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEE
        LLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEE
Subjt:  LLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEE

Query:  VKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
        V DFLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
Subjt:  VKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD

Query:  QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKII
        QALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKID++I P LPSEY+NYLENPM+II
Subjt:  QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKII

Query:  NGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLL
        + AEKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M++KVFKLITDSMT +V+++ L +E   I A LLL
Subjt:  NGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLL

Query:  ELPKEQLLNWIFECLVELHASLPALIKY
        ELP+EQLLNW+F+CL ELHASLPALIKY
Subjt:  ELPKEQLLNWIFECLVELHASLPALIKY

Q49V12 Transcription-repair-coupling factor1.1e-12440.03Show/hide
Query:  LRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLME
        L+ GDYVVH   G+GR++G++  ++ G     +Y+ ++Y       +PV Q  ++  +  + +E K P+ L+KL  T  W+K K K + +++ M  +L+E
Subjt:  LRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLME

Query:  LYLHRLKQRRPPY-PKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVI
        LY  R       + P  +   DF   FPYE T DQ ++  ++++D+ E E PMDRL+CGDVG+GKTEVA+RA F  V  GKQ   L PT +LA+QH+E +
Subjt:  LYLHRLKQRRPPY-PKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVI

Query:  TQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALT
         +R   FP +++ L+SRF+T  E ++  + +K G +DI+VGTH LLG  + Y +LGLL+VDEEQRFGV+ KE+I S K ++DVLTL+ATPIPRTL++++ 
Subjt:  TQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALT

Query:  GFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
        G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E ++ L+   PD  I +AHG+   + LEETM +F   +  I++ T
Subjt:  GFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT

Query:  NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVG
         I+E+G+D+ NANT+I++D  +FGL+QLYQLRGRVGR+ +  +AY  +P   +LS+ A +RL A++E  ELG GF++A RD+ IRG G + G+QQ G + 
Subjt:  NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVG

Query:  NVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEK-AAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRR
        +VG DL+ +ML +++++    +        ++I+++I  +LP+EYI   ++ ++I     K  +ET    LM   + L  +    P  +E LL+ + ++ 
Subjt:  NVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEK-AAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRR

Query:  MAADLGISRIYASGKTV
         A   G++ I   GK V
Subjt:  MAADLGISRIYASGKTV

Q4L3G0 Transcription-repair-coupling factor3.4e-12338.37Show/hide
Query:  YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLP
        Y+Q+V   +++    K K  R+R ++     K+  Y  L  GDYVVH   G+GR++G++  ++ G     +Y+ ++Y       +PV Q  ++  +  + 
Subjt:  YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLP

Query:  NETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVG
        +E K P+ L+KL   S W+K K K + +++ +  +L+ LY  R       Y + +A +  F   FPYE T DQ ++  +++ D+ ERE PMDRL+CGDVG
Subjt:  NETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVG

Query:  FGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE
        +GKTEVA+RA F  V  GKQ   L PT +LA+QH+E + +R   FP VQI L+SRF++  E ++  + +K G +DI+VGTH LLG  + Y +LGLL+VDE
Subjt:  FGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE

Query:  EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLE
        EQRFGV+ KE+I + KT++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  R++ + E ++ L+
Subjt:  EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLE

Query:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERL
           PD  IA+AHG+   + LEETM +F  G+  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +    +L++ A ERL
Subjt:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERL

Query:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA
         A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        V++++++  +LP+EYI   +  ++I     K 
Subjt:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA

Query:  AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSE
           +   L    + L  +    P  +E LL+ + ++  A   G++ I   GK +  E  ++ K     T+ M  E
Subjt:  AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSE

Q55750 Transcription-repair-coupling factor1.6e-15245.25Show/hide
Query:  KVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMV
        +VD   L  GDYVVHK  GIG+F  +K D         EY+ I+YADG+ ++P       L R+   +   RP  L K+     WE  K K + A++K+ 
Subjt:  KVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMV

Query:  VDLMELYLHRLKQRRPPYPKCSA-MEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSG-KQAMVLAPTIVLAK
        VDL+ LY  R KQ    YP  S   ++    FPY+PT DQ +A  DV++DL E + PMDRL+CGDVGFGKTEVA+RAIF  V+SG KQ  +LAPT VL +
Subjt:  VDLMELYLHRLKQRRPPYPKCSA-MEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSG-KQAMVLAPTIVLAK

Query:  QHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRT
        QH+  + +RF+ +P + IGLL+RF+T +EK++ L  +K G+LDI+VGT  +LG  V + +LGLLV+DEEQRFGV QKEKI + KT +DVLTL+ATPIPRT
Subjt:  QHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRT

Query:  LYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDI
        LY++L+G R+ SLITTPPP R PIKTHLS ++ E +++AI+ EL+RGGQVFYV+PRI+G+EE+   L    P   IA+ HG+    +LE TM  F  G+ 
Subjt:  LYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDI

Query:  KILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQ
         IL+CT I+E+GLDI   NTIIV+D Q+FGLAQLYQLRGRVGR+  +AHA+L YP++  L+++A  RL AL+E  +LG G+QLA RDM IRG G + G +
Subjt:  KILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQ

Query:  QTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKK
        Q+G +  +G + + EML D++ ++    +  V  +  +ID+ +   +PS+YI  LE  M           TD   L +   +   ++G  P  +E L K 
Subjt:  QTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKK

Query:  LYVRRMAADLGISRIYASGK-TVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPKEQLLNWI
        + ++ +A  LG SRI   GK  + +ET M    +KL+ +++ + +    +   +  +  GL +  P +Q+ N I
Subjt:  LYVRRMAADLGISRIYASGK-TVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELPKEQLLNWI

Q5HRQ2 Transcription-repair-coupling factor3.8e-12238.38Show/hide
Query:  YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLP
        Y+Q+V   +++    + K  R+R ++     K+  Y  L  GDY+VH   G+GR++G++  ++ G T   +Y+ ++Y       +PV Q  ++  +  + 
Subjt:  YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLP

Query:  NETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVG
        +E K PR L+KL  T  W+K K K + +++ +  +L++LY  R       Y + +A +  F   FPYE T DQ ++  +++ D+ ER  PMDRL+CGDVG
Subjt:  NETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVG

Query:  FGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE
        +GKTEVA+RA F  V  GKQ   L PT +LA+QH+E + +R   FP V+I L+SRF+T  E  +  + +K G +DI+VGTH LLG  + Y +LGLL+VDE
Subjt:  FGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE

Query:  EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLE
        EQRFGV+ KE+I + K ++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E ++ L+
Subjt:  EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLE

Query:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERL
           PD  IA+AHG+   + LEETM +F   +  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +P   +L++ A ERL
Subjt:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERL

Query:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA
         A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +  S     +++++ +  +LP+EYI   +  ++I     K 
Subjt:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA

Query:  AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTV
           +   L    + L  +    P  +E LL  + ++  A   G+  I   GK++
Subjt:  AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTV

Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.4e-5534.86Show/hide
Query:  EDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQ----IGLLS
        + F    PY  T  Q  A S++  DL +R  PM+RL+ GDVG GKT VA  A   V+ SG QA  +APT +LA QH+E       +   V     IGLL+
Subjt:  EDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQ----IGLLS

Query:  RFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPR
              +       ++ G +  I+GTHSL+ +++ Y+ L + VVDE+QRFGV Q+ K  S  + TS+                      VL +SATPIPR
Subjt:  RFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPR

Query:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKDFLEAS---------FPDIEIALAHGKQYSKQ
        +L LAL G    + IT  P  R+P++TH+   ++  +K   S +  +L+ GG+V+ V P I   E++     AS         FP     L HG+  S  
Subjt:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKDFLEAS---------FPDIEIALAHGKQYSKQ

Query:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERD
         EE +  F  G+ +IL+ T ++E G+D+ +A+ ++V + ++FG+AQL+QLRGRVGR  +++        K LL   +   L  L    +   GF LA  D
Subjt:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERD

Query:  MGIRGFGTIFGEQQTG
        + +RG G + G++Q+G
Subjt:  MGIRGFGTIFGEQQTG

AT3G02060.1 DEAD/DEAH box helicase, putative0.0e+0078.86Show/hide
Query:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAM
        M  L P PD  T  PLV  +L SFP   RLF  +  LRR  ++  S+  +V A   +    AK  R RE+ EL E DSIS+LNER+RR  GKRE++R AM
Subjt:  MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAM

Query:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRM
        D+EEA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+KQASR+
Subjt:  DAEEADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRM

Query:  LYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL
        LYRYNLPNETKRPRTLS+L+DTS WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DFAAQFPY  T DQK+AF DVEKDLTERETPMDRL
Subjt:  LYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL

Query:  ICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLG
        ICGDVGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLG
Subjt:  ICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLG

Query:  LLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEE
        LLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEE
Subjt:  LLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEE

Query:  VKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
        V DFLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
Subjt:  VKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD

Query:  QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKII
        QALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKID++I P LPSEY+NYLENPM+II
Subjt:  QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKII

Query:  NGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLL
        + AEKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M++KVFKLITDSMT +V+++ L +E   I A LLL
Subjt:  NGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLL

Query:  ELPKEQLLNWIFECLVELHASLPALIKY
        ELP+EQLLNW+F+CL ELHASLPALIKY
Subjt:  ELPKEQLLNWIFECLVELHASLPALIKY

AT3G02060.2 DEAD/DEAH box helicase, putative0.0e+0079.03Show/hide
Query:  LSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAMDAE
        L P PD  T  PLV  +L SFP   RLF  +  LRR  ++  S+  +V A   +    AK  R RE+ EL E DSIS+LNER+RR  GKRE++R AMD+E
Subjt:  LSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAMDAE

Query:  EADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYR
        EA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+KQASR+LYR
Subjt:  EADRYIQMVKEQQQRGLQKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYR

Query:  YNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG
        YNLPNETKRPRTLS+L+DTS WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DFAAQFPY  T DQK+AF DVEKDLTERETPMDRLICG
Subjt:  YNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLV
        DVGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLGLLV
Subjt:  DVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD
        VDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV D
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
        FLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL

Query:  ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGA
        ERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKID++I P LPSEY+NYLENPM+II+ A
Subjt:  ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGA

Query:  EKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELP
        EKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M++KVFKLITDSMT +V+++ L +E   I A LLLELP
Subjt:  EKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQNCLSFEEHHIKAGLLLELP

Query:  KEQLLNWIFECLVELHASLPALIKY
        +EQLLNW+F+CL ELHASLPALIKY
Subjt:  KEQLLNWIFECLVELHASLPALIKY

AT5G26742.1 DEAD box RNA helicase (RH3)5.4e-0725.5Show/hide
Query:  MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIA
        +VLAPT  LAKQ  + I +   + S   V  G+    Q  A        +  G +D++VGT   + D +   +L L     LV+DE +Q   V  +E + 
Subjt:  MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIA

Query:  SFKTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD
        S   ++                V  L+   +   L + L G +D  L      E + +     +S SK  + S +     +GG+        +  +EV  
Subjt:  SFKTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
         L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      + ++L
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL

Query:  ER
        ER
Subjt:  ER

AT5G26742.2 DEAD box RNA helicase (RH3)5.4e-0725.5Show/hide
Query:  MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIA
        +VLAPT  LAKQ  + I +   + S   V  G+    Q  A        +  G +D++VGT   + D +   +L L     LV+DE +Q   V  +E + 
Subjt:  MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIA

Query:  SFKTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD
        S   ++                V  L+   +   L + L G +D  L      E + +     +S SK  + S +     +GG+        +  +EV  
Subjt:  SFKTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
         L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      + ++L
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL

Query:  ER
        ER
Subjt:  ER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACTTTCACCCGCACCGGACGTTTCCACTTTCAGACCTCTAGTAGCCTTCAGACTCGGCTCATTTCCCAGGCAATGGAGGCTCTTCAACCGTAACTGTACTCT
CCGACGCTGCCCTAAGCGATGCATTTCTGTCACTAATGTCGTCTATGCCGAAGATGTTATGGTTCCCGGCACCGCTAAATCGGCGAGGCGGAGAGAGCAAATTGAGCTTG
AGCGTGACTCTATTTCGATTCTCAATGAAAGAGTTCGCCGTTATCATGGCAAGAGGGAGTCTTCGAGGACGGCTATGGACGCCGAGGAGGCTGACCGGTACATTCAGATG
GTGAAGGAGCAGCAGCAAAGGGGGCTGCAGAAGTTGAAGGGGGATAGGCAGCGGAATGAGAGCGATGGCTTTAATTACAAGGTTGACCCTTACACGCTTCGTTCGGGGGA
TTATGTTGTGCACAAGAAGGTCGGTATTGGCCGATTCGTTGGGATTAAATTTGATGTTCAGAAGGGTTCTACGGAGCCTATCGAGTATGTGTTCATAGAGTATGCTGATG
GGATGGCGAAGCTTCCTGTTAAACAGGCGTCTCGAATGCTTTATCGATATAATCTCCCAAATGAAACAAAAAGACCTCGGACATTGAGCAAATTAAATGACACTAGCACG
TGGGAAAAGAGAAAGACCAAAGGAAAGGTTGCAATTCAGAAGATGGTTGTTGACTTGATGGAACTGTATCTACATAGGTTGAAACAGAGAAGGCCTCCATACCCAAAGTG
TTCGGCAATGGAGGATTTTGCCGCTCAGTTTCCTTACGAGCCTACAGTGGACCAAAAGGAGGCTTTCAGTGATGTCGAGAAAGATTTGACAGAGAGGGAAACTCCTATGG
ACAGATTGATTTGTGGAGATGTTGGCTTTGGTAAAACTGAAGTTGCATTGCGTGCAATCTTCTGTGTAGTTTCATCAGGAAAGCAAGCTATGGTTCTAGCACCAACGATT
GTCCTTGCCAAACAGCATTTTGAAGTTATCACTCAGAGATTTTCTTCATTTCCCGATGTCCAGATTGGACTTCTGAGCAGGTTTCAGACAAAAGCAGAGAAAGAGAAACA
TCTAGACATGATCAAAGAAGGTCAATTGGACATTATTGTTGGGACTCACTCACTCCTTGGAGATCGTGTTGTGTATAATAATTTAGGGCTTCTGGTTGTTGATGAGGAAC
AGAGGTTTGGTGTCAAGCAGAAGGAGAAAATTGCTTCTTTTAAAACCTCAATTGACGTTCTTACTCTCTCTGCAACTCCCATACCACGGACCCTGTATTTAGCTTTGACT
GGATTTCGCGATGCCAGCTTGATTACAACTCCACCTCCGGAAAGAGTTCCAATAAAAACCCATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCAGCTATTAAATATGA
GCTGGAACGTGGAGGCCAAGTTTTTTATGTTTTACCTCGAATTAAAGGACTTGAGGAAGTGAAGGATTTTCTTGAGGCTAGTTTTCCAGACATTGAAATAGCTCTTGCTC
ATGGAAAGCAATACTCAAAGCAACTTGAAGAAACGATGGAGAATTTTGCACTTGGTGATATTAAGATTCTTATATGCACAAATATTGTTGAAAGTGGTCTGGATATCCAA
AACGCTAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTGTACCAGCTGCGTGGAAGGGTGGGACGGGCAGACAAGGAAGCTCATGCATACTTGTT
TTATCCAGACAAGTCCCTGCTATCTGATCAAGCACTGGAAAGGCTTGCAGCCCTTGAAGAATGCCGTGAACTCGGGCAAGGTTTCCAACTCGCAGAGAGAGACATGGGCA
TAAGAGGCTTTGGTACCATCTTTGGTGAACAACAAACCGGTGATGTTGGAAATGTGGGCATTGATCTATTCTTTGAAATGCTTTTCGACAGCTTGTCTAAGGTTGATGAA
CACCGGGTTGTCTCTGTCCCATACCAGTCAGTTAAGATTGATGTAGATATTAAGCCTCATTTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATAATTAA
TGGAGCTGAGAAAGCTGCTGAGACAGACATTTGGGCTCTAATGCAATTTACTGAAAATTTACGCCGTCAACATGGAAAAGAGCCTTACTCCATGGAGATTCTCTTGAAGA
AGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTCCCGGATATATGCTTCTGGAAAGACTGTTTGCATGGAAACTAAAATGAATAGGAAAGTTTTCAAGTTGATA
ACCGATTCAATGACATCAGAGGTGCATCAAAATTGTTTATCTTTTGAGGAACATCATATTAAGGCTGGACTTCTCTTAGAGCTACCTAAAGAACAACTGCTAAATTGGAT
CTTCGAGTGCTTGGTCGAACTTCATGCTTCCCTCCCAGCCTTAATCAAATACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAATATGGAAAATAGTCGGAGACCCGACCCGACATATAAATATCTAATAAGAAAATTTGGCTGGCTTGCTTCCACGTACAGTCCAAAAACCCCTCCAAAACCTCCACA
TTTATTATCCTTCTCTCTGTAAATTTCTCCCACTCAAAAGCTTTCTCCCACCCCTCCAATGGCGGAATTTCAACCTCCGTTCCCATTTTCCTTCGATTTTCCACCTTCTT
GATTCATTCCCCACTCCACTACCCCCTCTTTCTCACGCTATACTCTTCAATGGCTTTACTTTCACCCGCACCGGACGTTTCCACTTTCAGACCTCTAGTAGCCTTCAGAC
TCGGCTCATTTCCCAGGCAATGGAGGCTCTTCAACCGTAACTGTACTCTCCGACGCTGCCCTAAGCGATGCATTTCTGTCACTAATGTCGTCTATGCCGAAGATGTTATG
GTTCCCGGCACCGCTAAATCGGCGAGGCGGAGAGAGCAAATTGAGCTTGAGCGTGACTCTATTTCGATTCTCAATGAAAGAGTTCGCCGTTATCATGGCAAGAGGGAGTC
TTCGAGGACGGCTATGGACGCCGAGGAGGCTGACCGGTACATTCAGATGGTGAAGGAGCAGCAGCAAAGGGGGCTGCAGAAGTTGAAGGGGGATAGGCAGCGGAATGAGA
GCGATGGCTTTAATTACAAGGTTGACCCTTACACGCTTCGTTCGGGGGATTATGTTGTGCACAAGAAGGTCGGTATTGGCCGATTCGTTGGGATTAAATTTGATGTTCAG
AAGGGTTCTACGGAGCCTATCGAGTATGTGTTCATAGAGTATGCTGATGGGATGGCGAAGCTTCCTGTTAAACAGGCGTCTCGAATGCTTTATCGATATAATCTCCCAAA
TGAAACAAAAAGACCTCGGACATTGAGCAAATTAAATGACACTAGCACGTGGGAAAAGAGAAAGACCAAAGGAAAGGTTGCAATTCAGAAGATGGTTGTTGACTTGATGG
AACTGTATCTACATAGGTTGAAACAGAGAAGGCCTCCATACCCAAAGTGTTCGGCAATGGAGGATTTTGCCGCTCAGTTTCCTTACGAGCCTACAGTGGACCAAAAGGAG
GCTTTCAGTGATGTCGAGAAAGATTTGACAGAGAGGGAAACTCCTATGGACAGATTGATTTGTGGAGATGTTGGCTTTGGTAAAACTGAAGTTGCATTGCGTGCAATCTT
CTGTGTAGTTTCATCAGGAAAGCAAGCTATGGTTCTAGCACCAACGATTGTCCTTGCCAAACAGCATTTTGAAGTTATCACTCAGAGATTTTCTTCATTTCCCGATGTCC
AGATTGGACTTCTGAGCAGGTTTCAGACAAAAGCAGAGAAAGAGAAACATCTAGACATGATCAAAGAAGGTCAATTGGACATTATTGTTGGGACTCACTCACTCCTTGGA
GATCGTGTTGTGTATAATAATTTAGGGCTTCTGGTTGTTGATGAGGAACAGAGGTTTGGTGTCAAGCAGAAGGAGAAAATTGCTTCTTTTAAAACCTCAATTGACGTTCT
TACTCTCTCTGCAACTCCCATACCACGGACCCTGTATTTAGCTTTGACTGGATTTCGCGATGCCAGCTTGATTACAACTCCACCTCCGGAAAGAGTTCCAATAAAAACCC
ATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCAGCTATTAAATATGAGCTGGAACGTGGAGGCCAAGTTTTTTATGTTTTACCTCGAATTAAAGGACTTGAGGAAGTG
AAGGATTTTCTTGAGGCTAGTTTTCCAGACATTGAAATAGCTCTTGCTCATGGAAAGCAATACTCAAAGCAACTTGAAGAAACGATGGAGAATTTTGCACTTGGTGATAT
TAAGATTCTTATATGCACAAATATTGTTGAAAGTGGTCTGGATATCCAAAACGCTAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTGTACCAGC
TGCGTGGAAGGGTGGGACGGGCAGACAAGGAAGCTCATGCATACTTGTTTTATCCAGACAAGTCCCTGCTATCTGATCAAGCACTGGAAAGGCTTGCAGCCCTTGAAGAA
TGCCGTGAACTCGGGCAAGGTTTCCAACTCGCAGAGAGAGACATGGGCATAAGAGGCTTTGGTACCATCTTTGGTGAACAACAAACCGGTGATGTTGGAAATGTGGGCAT
TGATCTATTCTTTGAAATGCTTTTCGACAGCTTGTCTAAGGTTGATGAACACCGGGTTGTCTCTGTCCCATACCAGTCAGTTAAGATTGATGTAGATATTAAGCCTCATT
TGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATAATTAATGGAGCTGAGAAAGCTGCTGAGACAGACATTTGGGCTCTAATGCAATTTACTGAAAATTTA
CGCCGTCAACATGGAAAAGAGCCTTACTCCATGGAGATTCTCTTGAAGAAGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTCCCGGATATATGCTTCTGGAAA
GACTGTTTGCATGGAAACTAAAATGAATAGGAAAGTTTTCAAGTTGATAACCGATTCAATGACATCAGAGGTGCATCAAAATTGTTTATCTTTTGAGGAACATCATATTA
AGGCTGGACTTCTCTTAGAGCTACCTAAAGAACAACTGCTAAATTGGATCTTCGAGTGCTTGGTCGAACTTCATGCTTCCCTCCCAGCCTTAATCAAATACTAGCTCTTG
GTACAGCGGGTCTTACGATAATGGACATATTTGCTTAATAAGAGGTTTCTACATGCATATAACATCCATTTATCAGGCTTGTTTTGTTAAAAGCCTGAAATATAGACTTG
GCCTCCAACGATCGCTGATCACGAAGCCTTCGACGTGGAAAATCTCAGGTCTTAGTGCATTAATCATGTCATAACATGCAGTACCAAGCAAAAGTATATTACATTTTGTT
AGTAAGTTGGAACAAGCTGATGGAAATCACTCTAGAGAATTGTTTCAAGGATCACAGGCTGGAAGTTATCTTCCCAGAATATCTAGCAGTGCCCCGGATCTGCTCGTGAT
ACACGATATCGAGACTCGAGAATGGCTAACACTCCACTCCCCAGGTCACAATTTTTCTACTGCCTTGTATTTCTACAAATGAAGTTTCAGTGTTTGGTCAGGATCACAGT
TCTGTTTTATTCTGGCCATAAATTTAACTTGTAATTCTTTACAAAAAATTTTATATGAAAAGGGGGTGTGTTGTAAAGAAATTTTCACTGAACCAACAAGCATAGAGTTA
TTTTTTAGTCACAGTAATTAATTTGGTTCCACCATATGGACACATTTGGCTACAAAATAGTGAAATTTTTTTATTTTATTGTACTGAATTGCGTGAGATACCTTTTATCT
TTAGCCATTTATTTATTTTGATAGTG
Protein sequenceShow/hide protein sequence
MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQM
VKEQQQRGLQKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTST
WEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSSGKQAMVLAPTI
VLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALT
GFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQ
NANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLI
TDSMTSEVHQNCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY