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MC04g1170 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1170
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC04:19730914..19731128
RNA-Seq ExpressionMC04g1170
SyntenyMC04g1170
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2615114.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]1.61e-1144.87Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

KAB2620658.1 hypothetical protein D8674_042607 [Pyrus ussuriensis x Pyrus communis]1.87e-1144.87Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

KAB2635258.1 hypothetical protein D8674_025792 [Pyrus ussuriensis x Pyrus communis]3.52e-1143.59Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYG+   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]1.20e-1146.15Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR RN  LL++ LW F  E  +LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

XP_018504745.1 PREDICTED: uncharacterized protein LOC108867743 [Pyrus x bretschneideri]2.15e-1144.87Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

TrEMBL top hitse value%identityAlignment
A0A540M4H0 zf-RVT domain-containing protein5.82e-1246.15Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR RN  LL++ LW F  E  +LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

A0A5N5GWF9 Ribonuclease H protein7.78e-1244.87Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

A0A5N5GZA5 zf-RVT domain-containing protein9.03e-1244.87Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

A0A5N5H648 Ribonuclease H protein2.74e-1143.59Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ +KYGL   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

A0A5N5I637 zf-RVT domain-containing protein1.71e-1143.59Show/hide
Query:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI
        +H +KW++V K  E GGL VGNLR +N  LL++ LW F  E ++LW+K++ SKYG+   G        G+ R+ WK I
Subjt:  SHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLW-FSLETDALWYKIVTSKYGLLAVG-------TGTYRNLWKAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTCCCATCCCATTAAATGGAAGGTTGTGTTTAAATTGTGTGAGGCAGGAGGGCTAAAGGTAGGAAATCTGAGAATAAGAAATAACACTCTCCTTTCAGAGTCATTGTG
GTTTTCCCTTGAAACTGATGCTCTATGGTATAAGATTGTGACTAGCAAGTATGGTCTCCTCGCCGTTGGCACTGGCACCTATAGAAATCTGTGGAAAGCAATC
mRNA sequenceShow/hide mRNA sequence
GGGTCCCATCCCATTAAATGGAAGGTTGTGTTTAAATTGTGTGAGGCAGGAGGGCTAAAGGTAGGAAATCTGAGAATAAGAAATAACACTCTCCTTTCAGAGTCATTGTG
GTTTTCCCTTGAAACTGATGCTCTATGGTATAAGATTGTGACTAGCAAGTATGGTCTCCTCGCCGTTGGCACTGGCACCTATAGAAATCTGTGGAAAGCAATC
Protein sequenceShow/hide protein sequence
GSHPIKWKVVFKLCEAGGLKVGNLRIRNNTLLSESLWFSLETDALWYKIVTSKYGLLAVGTGTYRNLWKAI