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MC04g1202 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1202
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationMC04:20076574..20076645
RNA-Seq ExpressionMC04g1202
SyntenyMC04g1202
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1866365.1 hypothetical protein Lal_00024375 [Lupinus albus]4.37e-0583.33Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKPITVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
KAF1895986.1 hypothetical protein Lal_00046742 [Lupinus albus]6.37e-0583.33Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        V IFPDKPITVRL  TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
KAF2924332.1 hypothetical protein DAI22_07g262400 [Oryza sativa Japonica Group]2.31e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+T+RL  TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
MBA0800336.1 hypothetical protein [Gossypium harknessii]5.00e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVRL  TR+GSGK S
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
YP_009776603.1 ribosomal protein L16 [Phyllanthus amarus]6.05e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+T+RL  TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
TrEMBL top hitse value%identityAlignment
A0A3P6GHN6 Ribosomal_L16 domain-containing protein3.50e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A0A6A5M606 Ribosomal_L16 domain-containing protein2.11e-0583.33Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKPITVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A0A6A5PE64 Ribosomal_L16 domain-containing protein3.08e-0583.33Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        V IFPDKPITVRL  TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A0A6H1YF27 50S ribosomal protein L16, chloroplastic2.93e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+T+RL  TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A0A7J9GRX7 Ribosomal_L16 domain-containing protein2.42e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVRL  TR+GSGK S
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
SwissProt top hitse value%identityAlignment
A4QJF2 50S ribosomal protein L16, chloroplastic2.3e-0479.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A4QJN6 50S ribosomal protein L16, chloroplastic2.3e-0479.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
A4QK55 50S ribosomal protein L16, chloroplastic2.3e-0479.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
Q09WY0 50S ribosomal protein L16, chloroplastic1.7e-0483.33Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKPITVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
Q70XX3 50S ribosomal protein L16, chloroplastic2.3e-0479.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VR+FPDKPITVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS
Arabidopsis top hitse value%identityAlignment
ATCG00790.1 ribosomal protein L161.6e-0579.17Show/hide
Query:  VRIFPDKPITVRLYRTRLGSGKGS
        VRIFPDKP+TVR   TR+GSGKGS
Subjt:  VRIFPDKPITVRLYRTRLGSGKGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTACGTATATTTCCAGACAAACCCATTACAGTAAGACTCTACCGAACACGTTTGGGTTCAGGGAAAGGATCA
mRNA sequenceShow/hide mRNA sequence
GTACGTATATTTCCAGACAAACCCATTACAGTAAGACTCTACCGAACACGTTTGGGTTCAGGGAAAGGATCA
Protein sequenceShow/hide protein sequence
VRIFPDKPITVRLYRTRLGSGKGS