; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1229 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1229
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontransmembrane protein 50A
Genome locationMC04:20365739..20368910
RNA-Seq ExpressionMC04g1229
SyntenyMC04g1229
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007919 - Uncharacterised protein family UPF0220


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140320.1 transmembrane protein 50A [Cucumis sativus]4.88e-9197.06Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]8.43e-9297.79Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022141734.1 transmembrane protein 50A [Momordica charantia]3.57e-9399.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022993057.1 transmembrane protein 50A [Cucurbita maxima]2.42e-9197.06Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_038874577.1 transmembrane protein 50A [Benincasa hispida]1.20e-9197.06Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

TrEMBL top hitse value%identityAlignment
A0A1S3CCJ8 transmembrane protein 50A4.08e-9297.79Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1CJN8 transmembrane protein 50A1.73e-9399.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1FCW9 transmembrane protein 50A-like9.64e-9196.32Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFAS AALMFNCVR+EDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1JRP9 transmembrane protein 50A1.17e-9197.06Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

D6BRE9 Transmembrane protein 50a, putative2.76e-9094.85Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR LKLWLFFAYVVSFVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DSIVKTGPSVWTG AGVLQCVFVL+SGLIYWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

SwissProt top hitse value%identityAlignment
A9CAZ8 Transmembrane protein 50B1.0e-0830.71Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V    P    H  +  G+F++ A  M N V    +    YE G   R   ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

O95807 Transmembrane protein 50A2.1e-0930.95Show/hide
Query:  AGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEG--EWRRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSV
        AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y EG       ++WLF  ++++F SL AS+ +L    + K    V
Subjt:  AGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEG--EWRRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSV

Query:  WTGVAGVLQCVFVLVSGLIYWTSHSE
        + G+A   Q  F+   GL++    +E
Subjt:  WTGVAGVLQCVFVLVSGLIYWTSHSE

P56557 Transmembrane protein 50B1.0e-0830.71Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V    P    H  +  G+F++ A  M N V    +    YE G   R   ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q3SZL9 Transmembrane protein 50B1.0e-0830.71Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V    P    H  +  G+F++ A  M N V    +    YE G   R   ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRR--LKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q9CXL1 Transmembrane protein 50A9.3e-1030Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEG--EWRRLKLWLFFAYVVSFVSLAASVG
        MD  E  +      AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y EG       ++WLF  ++++F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEEG--EWRRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L    + K    V+ G+A   Q  F+   GL++    +E
Subjt:  LLIQDSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein2.9e-6786.76Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ
        MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEW RLKLWLF AYVV+FVSLAASVGLLIQ
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        DS+VKTGPS WTGVAGV QCVFVL+SGL+YWTSHSE
Subjt:  DSIVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGCGGAACTGTGGTCAATCTTCGGCCCAGGCGTCGCCGGTGCCGTGTTCGGCGCCGGATGGTGGTTTTGGGTTGACGCCGTCGTCTGCAGTTCTGTTCCGGT
CTCCTTCGTCCACTACCTCCCAGGTATTTTTGCCTCTTTCGCGGCTCTCATGTTCAATTGCGTTCGGAAAGAAGATATCGATTATTCTCCGTACGAGGAAGGCGAATGGA
GGCGATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCAATAGTAAAAACTGGGCCATCAGTG
TGGACGGGAGTTGCGGGAGTATTACAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATCTACTGGACTTCTCACTCGGAATAA
mRNA sequenceShow/hide mRNA sequence
GGAAAAAAAAAAAAAAAAAAAAAACTTCTTCGATTATTGAAGCTTCAATGGAAGATTGAAGATTAAGTATTGGTAGGAAAGAGTCTGAACTGTGAGATCATTATTAAGTT
CACAGTTGCCTCTCCAAATCAAGCTGTCTCGACCCGCAAGCGCAAGGAGGAGGCAAAACGAAGAAACCCCAAATGGATTTGGCGGAACTGTGGTCAATCTTCGGCCCAGG
CGTCGCCGGTGCCGTGTTCGGCGCCGGATGGTGGTTTTGGGTTGACGCCGTCGTCTGCAGTTCTGTTCCGGTCTCCTTCGTCCACTACCTCCCAGGTATTTTTGCCTCTT
TCGCGGCTCTCATGTTCAATTGCGTTCGGAAAGAAGATATCGATTATTCTCCGTACGAGGAAGGCGAATGGAGGCGATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTA
TCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCAATAGTAAAAACTGGGCCATCAGTGTGGACGGGAGTTGCGGGAGTATTACAGTGTGTGTTTGT
GTTGGTTAGTGGGTTGATCTACTGGACTTCTCACTCGGAATAAGTTGGAGAGAATCAATGAACTTGGACGTCAGAGGCTGAAGAGAGTTACCAACTGTGTAGAGCTGCAT
TGGCGAGTCATTTGTGCATGTTTCATTAGAACTGAACCACAAGGTCTCCCTTTACTTTTACATCTTGTAAATGTTGTGTTATTCGTCAGCTCAAACCATATCTACATATC
TTTACGAATTCAATTATAAGCGAGCCAAATTTTCA
Protein sequenceShow/hide protein sequence
MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSV
WTGVAGVLQCVFVLVSGLIYWTSHSE