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MC04g1257 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1257
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S7
Genome locationMC04:20607519..20607650
RNA-Seq ExpressionMC04g1257
SyntenyMC04g1257
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69458.1 Tudor/PWWP/MBT superfamily protein [Prunus dulcis]8.56e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
WP_131796637.1 30S ribosomal protein S7 [Candidatus Frankia datiscae]6.05e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
YP_009241662.1 ribosomal protein S7 [Ziziphus jujuba]6.05e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
YP_009243658.1 ribosomal protein S7 [Cannabis sativa]6.05e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
YP_009871026.1 ribosomal protein S7 [Magnolia biondii]6.19e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
TrEMBL top hitse value%identityAlignment
A0A0M4R6T5 Ribosomal protein S72.93e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
A0A142BZ01 Ribosomal protein S72.93e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
A0A411GRV8 Ribosomal protein S72.93e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
A0A7D4VA23 Ribosomal protein S73.00e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
A0A7D6C7C9 Ribosomal protein S72.93e-1895.45Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR AQTERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
SwissProt top hitse value%identityAlignment
P26867 Ribosomal protein S7, mitochondrial2.9e-0561.36Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLV+  M +GK+TR  AIVY+TFHR A    DVIKL+V+A+E
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
P92557 Ribosomal protein S7, mitochondrial5.3e-1593.18Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR A+TERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
Q01902 Ribosomal protein S7, mitochondrial8.4e-1384.09Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRM +GKRTRV AIVY+TFHR A+TERDVIKLMVDAV+
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
Q9MF82 Ribosomal protein S7, mitochondrial4.9e-1384.09Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNF MKEGKRT+V AIVYQTFHR A+TE DVIKLM+DAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein3.7e-1693.18Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR A+TERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
ATMG01270.1 mitochondrial ribosomal protein S73.7e-1693.18Show/hide
Query:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE
        IKKLVNFRMKEGKRTRV AIVYQTFHR A+TERDVIKLMVDAVE
Subjt:  IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCATGCTATTGTTTATCAAACTTTTCATCGCTCAGCTCAAACTGAACGTGATGTAATCAA
ACTTATGGTTGACGCCGTAGAG
mRNA sequenceShow/hide mRNA sequence
ATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCATGCTATTGTTTATCAAACTTTTCATCGCTCAGCTCAAACTGAACGTGATGTAATCAA
ACTTATGGTTGACGCCGTAGAG
Protein sequenceShow/hide protein sequence
IKKLVNFRMKEGKRTRVHAIVYQTFHRSAQTERDVIKLMVDAVE