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MC04g1304 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1304
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-type domain-containing protein
Genome locationMC04:21074665..21075408
RNA-Seq ExpressionMC04g1304
SyntenyMC04g1304
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2603827.1 nuclear ribonuclease Z-like [Pyrus ussuriensis x Pyrus communis]1.78e-1530.65Show/hide
Query:  DASAATLVPFYISFTITTVLRN------LDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHE
        +A+  T++P ++      +L +      +    DWV   + ++  AR +     ++  L+       G   ++  +C++C+EDF+  DG  VSRLPC H 
Subjt:  DASAATLVPFYISFTITTVLRN------LDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHE

Query:  YHFKCVSRWLRFDHRCPVCRFPMP
        YH  C+ +WL+  H CP+CR+PMP
Subjt:  YHFKCVSRWLRFDHRCPVCRFPMP

KAE8022191.1 hypothetical protein FH972_008015 [Carpinus fangiana]5.00e-1430Show/hide
Query:  VLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTITTVL----RNLDEAVDWVHGGTPESR---IARTLRCTYDAVSRLKSNSSVVRGP
        +L+ L  +G PA   + ++R + S     +     +  P  ++F  TT++     + DE+ D +  G  ES    +AR +  T  A+  L+    V    
Subjt:  VLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTITTVL----RNLDEAVDWVHGGTPESR---IARTLRCTYDAVSRLKSNSSVVRGP

Query:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQTL
          +    C++C E+F+   G  ++RLPCSH YH  C+ +WL   HRCP+CR+P+P+V+ +
Subjt:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQTL

KAF3959276.1 hypothetical protein CMV_015897 [Castanea mollissima]6.05e-1430.04Show/hide
Query:  YDCFVCTSAVPHWAGRHADKPNNGFLIRVQNFHVVDPLYMPPGNHMVLDSNFQLLHFPPAHFSSFSAVHSFVLATL-DRLGVPATDPDPLARLLFSF---
        Y C+   + VP+   R    P + FLIR+   HV+   Y  P  ++V  ++F      P +  +F AV   +LA +    GVP    D     + SF   
Subjt:  YDCFVCTSAVPHWAGRHADKPNNGFLIRVQNFHVVDPLYMPPGNHMVLDSNFQLLHFPPAHFSSFSAVHSFVLATL-DRLGVPATDPDPLARLLFSF---

Query:  LRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEY
        +   A      L P  +   + T     D+ +D     + E+R  +T+     ++  LK     VR         C +CLE+F   DG  V  LPC H Y
Subjt:  LRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEY

Query:  HFKCVSRWLRFDHRCPVCRFPMP
        H  C+ +WL   H CP+CRFPMP
Subjt:  HFKCVSRWLRFDHRCPVCRFPMP

PON90729.1 43kDa postsynaptic protein [Trema orientale]3.91e-1534.03Show/hide
Query:  GVPATDPDPLARLLFS----FLRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVC
        G+P    + LA+ + S       RH D +AA L+P Y+  T+       D+A++  H        AR +R +   VS  KS+   +   + +  C CMVC
Subjt:  GVPATDPDPLARLLFS----FLRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVC

Query:  LEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        L+       +++ R+PCSH YH  C+ RWL  +H CPVCR+ MP
Subjt:  LEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

XP_024176460.1 uncharacterized protein LOC112182252 [Rosa chinensis]8.12e-1530.59Show/hide
Query:  FVLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTIT------TVLRNLD--EAVDWV---------HGGTPESRIARTLRCTYDAVSR
        F+   L R+GVP   P+    +L  F++R+      T  P Y+ +T+       ++L + D  E VDWV         H GT + +     R    ++ +
Subjt:  FVLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTIT------TVLRNLD--EAVDWV---------HGGTPESRIARTLRCTYDAVSR

Query:  LKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQT
        +K ++  V   S      C +CL+DF     +LV+ LPC H+YH  C+ + L   H CP+CR+PMP V+ 
Subjt:  LKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQT

TrEMBL top hitse value%identityAlignment
A0A0E0F9F3 RING-type domain-containing protein2.47e-1454.55Show/hide
Query:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        S  R  +C VCLE FD+  G  ++R+PCSH +H  C+  WLR  HRCP+CRFPMP
Subjt:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

A0A2P5EYX1 43kDa postsynaptic protein1.90e-1534.03Show/hide
Query:  GVPATDPDPLARLLFS----FLRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVC
        G+P    + LA+ + S       RH D +AA L+P Y+  T+       D+A++  H        AR +R +   VS  KS+   +   + +  C CMVC
Subjt:  GVPATDPDPLARLLFS----FLRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVC

Query:  LEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        L+       +++ R+PCSH YH  C+ RWL  +H CPVCR+ MP
Subjt:  LEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

A0A2P6SJ34 Putative transcription factor C2H2 family3.93e-1530.59Show/hide
Query:  FVLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTIT------TVLRNLD--EAVDWV---------HGGTPESRIARTLRCTYDAVSR
        F+   L R+GVP   P+    +L  F++R+      T  P Y+ +T+       ++L + D  E VDWV         H GT + +     R    ++ +
Subjt:  FVLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTIT------TVLRNLD--EAVDWV---------HGGTPESRIARTLRCTYDAVSR

Query:  LKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQT
        +K ++  V   S      C +CL+DF     +LV+ LPC H+YH  C+ + L   H CP+CR+PMP V+ 
Subjt:  LKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQT

A0A5N5FLS4 Nuclear ribonuclease Z-like8.61e-1630.65Show/hide
Query:  DASAATLVPFYISFTITTVLRN------LDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHE
        +A+  T++P ++      +L +      +    DWV   + ++  AR +     ++  L+       G   ++  +C++C+EDF+  DG  VSRLPC H 
Subjt:  DASAATLVPFYISFTITTVLRN------LDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHE

Query:  YHFKCVSRWLRFDHRCPVCRFPMP
        YH  C+ +WL+  H CP+CR+PMP
Subjt:  YHFKCVSRWLRFDHRCPVCRFPMP

A0A5N6R0F2 RING-type domain-containing protein2.42e-1430Show/hide
Query:  VLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTITTVL----RNLDEAVDWVHGGTPESR---IARTLRCTYDAVSRLKSNSSVVRGP
        +L+ L  +G PA   + ++R + S     +     +  P  ++F  TT++     + DE+ D +  G  ES    +AR +  T  A+  L+    V    
Subjt:  VLATLDRLGVPATDPDPLARLLFSFLRRHADASAATLVPFYISFTITTVL----RNLDEAVDWVHGGTPESR---IARTLRCTYDAVSRLKSNSSVVRGP

Query:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQTL
          +    C++C E+F+   G  ++RLPCSH YH  C+ +WL   HRCP+CR+P+P+V+ +
Subjt:  SSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPWVQTL

SwissProt top hitse value%identityAlignment
P0DPR2 E3 ubiquitin-protein ligase RNF437.1e-0851.11Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRF
        C +CLE+F   DG+ +  LPC HEYH  CV  WLR +H CP+C +
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRF

Q641J8 E3 ubiquitin-protein ligase RNF12-A1.6e-0747.73Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCR
        C VC+ ++ E  G  + +LPCSHEYH  C+ RWL  +  CP+CR
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCR

Q7T037 E3 ubiquitin-protein ligase RNF12-B1.6e-0747.73Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCR
        C VC+ ++ E  G  + +LPCSHEYH  C+ RWL  +  CP+CR
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCR

Q9DBU5 E3 ubiquitin-protein ligase RNF61.2e-0737.5Show/hide
Query:  TYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPM
        T + +  L + S    G  SE    C VC+ D+    G  + +LPC HE+H  C+ RWL  +  CPVCR P+
Subjt:  TYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPM

Q9LQX2 E3 ubiquitin-protein ligase MPSR12.1e-0741.67Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        C++CLE++  ++   V  +PC H +H  C+ +WL F   CPVCR+ MP
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

Arabidopsis top hitse value%identityAlignment
AT1G18770.1 RING/U-box superfamily protein4.6e-1046.94Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPW
        C++CLE+F E  GR V  LPC H++  +CV +W   +H CP+CRF +P+
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMPW

AT1G18780.1 RING/U-box superfamily protein6.6e-0947.92Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        C +CLE+F  DDGR +  LPC HE+  +CV  W    H CP+CR  +P
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

AT1G21960.1 RING/U-box superfamily protein1.8e-1131.03Show/hide
Query:  ATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIA--RTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSR
        ATLV  Y    +   + + DE  + +    P +++   R  R  Y+   +  S++SV           C +CLE+F++  G +V  LPC HE+   C+ +
Subjt:  ATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIA--RTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSR

Query:  WLRFDHRCPVCRFPMP
        W   DH CP+CRF +P
Subjt:  WLRFDHRCPVCRFPMP

AT1G74620.1 RING/U-box superfamily protein4.6e-1043.75Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        C +C+ED+ E    +V++LPC HE+H  C+++WL+ +H CP+CR  +P
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP

AT2G29840.1 RING/U-box superfamily protein4.6e-1047.92Show/hide
Query:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP
        C +CLE+F  DDGR +  LPC HE+  +C  +W   +H CP+CRF +P
Subjt:  CMVCLEDFDEDDGRLVSRLPCSHEYHFKCVSRWLRFDHRCPVCRFPMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGATACTTCCGGAGTCGGTGAGAGGCAGTTCCACAGAAGGCAACGGAAGCGGATGGTCCCTCACTTACGATTGCTTCGTCTGCACTTCCGCCGTCCCCCATTGGGCAGG
CCGCCACGCCGACAAGCCCAATAACGGCTTCCTCATTCGCGTCCAAAACTTCCACGTTGTGGACCCACTCTACATGCCACCTGGCAACCACATGGTCCTGGATTCCAACT
TCCAACTCCTCCACTTCCCGCCGGCCCACTTCTCCTCCTTCTCCGCCGTCCACAGCTTCGTCCTCGCCACCCTCGACCGCCTCGGCGTCCCCGCCACCGACCCCGACCCG
CTCGCCCGCCTCCTCTTCTCCTTCCTCCGCCGCCACGCCGACGCCTCCGCCGCCACTCTCGTCCCCTTCTACATCTCCTTCACCATCACCACCGTTCTTCGAAATCTGGA
CGAGGCCGTCGACTGGGTCCACGGAGGCACCCCCGAGTCTCGGATCGCGAGGACCCTGAGATGCACCTACGACGCCGTTTCCAGGCTGAAGAGTAATTCCAGTGTGGTCC
GTGGGCCGTCCTCCGAGAGAAGTTGTAATTGTATGGTGTGTCTGGAAGATTTTGACGAAGATGATGGGCGGCTGGTGAGCCGGCTGCCGTGCTCCCATGAGTACCATTTT
AAATGCGTTTCGCGTTGGCTGAGATTTGATCACCGCTGCCCCGTGTGCCGGTTTCCCATGCCCTGGGTTCAGACCCTGATGCCC
mRNA sequenceShow/hide mRNA sequence
CTGATACTTCCGGAGTCGGTGAGAGGCAGTTCCACAGAAGGCAACGGAAGCGGATGGTCCCTCACTTACGATTGCTTCGTCTGCACTTCCGCCGTCCCCCATTGGGCAGG
CCGCCACGCCGACAAGCCCAATAACGGCTTCCTCATTCGCGTCCAAAACTTCCACGTTGTGGACCCACTCTACATGCCACCTGGCAACCACATGGTCCTGGATTCCAACT
TCCAACTCCTCCACTTCCCGCCGGCCCACTTCTCCTCCTTCTCCGCCGTCCACAGCTTCGTCCTCGCCACCCTCGACCGCCTCGGCGTCCCCGCCACCGACCCCGACCCG
CTCGCCCGCCTCCTCTTCTCCTTCCTCCGCCGCCACGCCGACGCCTCCGCCGCCACTCTCGTCCCCTTCTACATCTCCTTCACCATCACCACCGTTCTTCGAAATCTGGA
CGAGGCCGTCGACTGGGTCCACGGAGGCACCCCCGAGTCTCGGATCGCGAGGACCCTGAGATGCACCTACGACGCCGTTTCCAGGCTGAAGAGTAATTCCAGTGTGGTCC
GTGGGCCGTCCTCCGAGAGAAGTTGTAATTGTATGGTGTGTCTGGAAGATTTTGACGAAGATGATGGGCGGCTGGTGAGCCGGCTGCCGTGCTCCCATGAGTACCATTTT
AAATGCGTTTCGCGTTGGCTGAGATTTGATCACCGCTGCCCCGTGTGCCGGTTTCCCATGCCCTGGGTTCAGACCCTGATGCCC
Protein sequenceShow/hide protein sequence
LILPESVRGSSTEGNGSGWSLTYDCFVCTSAVPHWAGRHADKPNNGFLIRVQNFHVVDPLYMPPGNHMVLDSNFQLLHFPPAHFSSFSAVHSFVLATLDRLGVPATDPDP
LARLLFSFLRRHADASAATLVPFYISFTITTVLRNLDEAVDWVHGGTPESRIARTLRCTYDAVSRLKSNSSVVRGPSSERSCNCMVCLEDFDEDDGRLVSRLPCSHEYHF
KCVSRWLRFDHRCPVCRFPMPWVQTLMP