; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1332 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1332
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein 2-like
Genome locationMC04:21309664..21313387
RNA-Seq ExpressionMC04g1332
SyntenyMC04g1332
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647163.1 hypothetical protein Csa_018814 [Cucumis sativus]2.94e-15291.96Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

XP_008441534.1 PREDICTED: RNA-binding protein 2 [Cucumis melo]1.45e-15292.41Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

XP_022141348.1 RNA-binding protein 2-like [Momordica charantia]1.54e-163100Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

XP_031743541.1 RNA-binding protein 2 isoform X7 [Cucumis sativus]4.86e-15291.96Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

XP_031743542.1 RNA-binding protein 2 isoform X8 [Cucumis sativus]3.51e-15291.96Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

TrEMBL top hitse value%identityAlignment
A0A1S3B4F0 RNA-binding protein 27.04e-15392.41Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

A0A6J1CKA2 RNA-binding protein 2-like7.46e-164100Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

A0A6J1E3U2 RNA-binding protein 2-like5.26e-14690.18Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YELPSSG P GH+MHN+L SDDR GP AVKDTQ IGSAYDRYLQSVQLSS  SGEVPT G+MGM RP+ANR+PVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDL PNGRNIEYGNHLP++SM RPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFAN ACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

A0A6J1JRD4 RNA-binding protein 2-like8.71e-14589.73Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YELPSSG P GH+MH++L SDDR GP AVKDTQ IGSAYDRYLQSVQLSS  SGEVPT G+MGM RP+ANR+PVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLP++S+ RPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFAN ACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

A0A6J1JXN9 RNA-binding protein 2-like isoform X28.40e-14588.84Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YE PSSGLP  HEMHNY+ +DD GGPRAVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RP+ANRMP+G
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDPVVMSRP AVSPDLA NGRNIEYGNHLP+DS  RP RETVPLPPDA+NTLYVEGLPSDSSRREVAHIFRPFVGYKELRLV+KESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQG
        PLILCFVDFANPACAATAMSALQG
Subjt:  PLILCFVDFANPACAATAMSALQG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.7e-4852.44Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQG
        DP++LCFVDF NPACAATA+SALQG
Subjt:  DPLILCFVDFANPACAATAMSALQG

F4HWF9 Nuclear speckle RNA-binding protein B2.1e-5156.77Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQ
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQ

G7ID19 RNA-binding protein 25.7e-7360.79Show/hide
Query:  MADDYWNRQQPLLPSP-GMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD +WNRQQ  LP P GMLKRPR +Y+   SG+ +G+E+HNY+  ++  G + + DT+ +GSAYDR+LQS  L+SFNSGE    G +G AR V      
Subjt:  MADDYWNRQQPLLPSP-GMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAV--SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHR
           +PG S+ DP  M     V   PDL+ NGR++ +G  LP+D+++RPG ET+PLP DAS+TLYVEGLPSDS++REVAHIFRPFVGY+E+RLV+KESKHR
Subjt:  GSRMPGPSIPDPVVMSRPPAV--SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHR

Query:  GGDPLILCFVDFANPACAATAMSALQG
        GGDPLILCFVDFANPACAATA+SALQG
Subjt:  GGDPLILCFVDFANPACAATAMSALQG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 52.8e-2767.05Show/hide
Query:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
        MDS  M   GR   PLPPDAS+TLY+EGLP++ +RREV+HIFRPFVG++E+RLV+KES+H GGDP +LCFVDF NPA A  A+ ALQG
Subjt:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG

Q8H0P8 RNA-binding protein 11.4e-7163.11Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MAD YWNRQQ LLP  G+ KRPR DYE+P+SGLP+G+EMH     +DR G   VKD++TIGSAYDRYLQ  Q+ SF SGE  T G +G+ R +       
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVM-SRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
          +P  S+ DP  M  R     PDLAPNGR + YG   PMD ++R G E   LPPDAS TLY+EGLPSD +RREVAHIFRPFVGY+E+RLVSKE+KHR G
Subjt:  SRMPGPSIPDPVVM-SRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQG
        DPLILCFVDFANPACAATA+SALQG
Subjt:  DPLILCFVDFANPACAATAMSALQG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.5e-5256.77Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQ
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQ

AT1G21320.2 nucleotide binding;nucleic acid binding2.2e-5953.91Show/hide
Query:  MADDYWNRQQ----PLLPSPGML--KRPRNDYELPSSGLPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPV
        MAD+YWN+Q+    P+  +P +L  KRPR+D++     +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R  
Subjt:  MADDYWNRQQ----PLLPSPGML--KRPRNDYELPSSGLPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPV

Query:  ANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKE
         + M     MPGPS+ + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++
Subjt:  ANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKE

Query:  SKHRGGDPLILCFVDFANPACAATAMSALQ
        SKHR GDP +LCFVDF N ACAATA+SALQ
Subjt:  SKHRGGDPLILCFVDFANPACAATAMSALQ

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-4952.44Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQG
        DP++LCFVDF NPACAATA+SALQG
Subjt:  DPLILCFVDFANPACAATAMSALQG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-3361.74Show/hide
Query:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF
        D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF
Subjt:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF

Query:  ANPACAATAMSALQG
         NPACAATA+SALQG
Subjt:  ANPACAATAMSALQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCA
TGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTT
CTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGAT
CCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACG
TGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGAT
ATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGT
GCCTTGCAAGGT
mRNA sequenceShow/hide mRNA sequence
GACGTGGAATTAGATAATTGATTGTTGGCTAATATCTACGGTGAGGTGTCGCGTACTGGATCCTAGTGTGTCTGAGGAGCTTCTTCCAGCGCCAAACATTTACTCGGGCT
CGGAAACAAGAGAAGCTCCAAATTAATGGCCACTTCTTTTTAGGGTTTTAGAATTCTGTAAGTGCTGGTCAAGTTCGATAAATTTGTCTCGGGTTTCCCAAGATCGCGCT
TTCCCTCTGTCTTCTGTCTCACTCTGAAGCTCTAATTTTGGAGAATTGCTGGAGATATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATG
CTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAA
AGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGC
CTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGT
CGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACT
TCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTC
TTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGT
Protein sequenceShow/hide protein sequence
MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPD
PVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMS
ALQG