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MC04g1408 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1408
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSHSP domain-containing protein
Genome locationMC04:22053835..22054250
RNA-Seq ExpressionMC04g1408
SyntenyMC04g1408
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]3.87e-2857.27Show/hide
Query:  MSSQNVSRQDWRNLA-QSNQPFNPQATWDTSG--NEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN
        MSSQ V+ QDWRN+  Q NQ F P  T++ S   N+   +M+L GFS+D LRINLNT T  ++V GQKSDG FN+TRLNER+ I EDC L+GV+AK  N+
Subjt:  MSSQNVSRQDWRNLA-QSNQPFNPQATWDTSG--NEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN

Query:  TLTVIFKKKK
        TL V F+K+K
Subjt:  TLTVIFKKKK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.16e-0846.27Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSD
        MSSQ +  QDWR++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK D
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSD

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]2.79e-1434.91Show/hide
Query:  VSRQ--DWRNLAQSNQPFNPQATW----DTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        +SRQ   W  + Q  + + P   W    +T+ +  ++ +  SG SR+ L+I+++    T+ +   K +G+N+ R+NE IPI  +CSLD V A F+NN L 
Subjt:  VSRQ--DWRNLAQSNQPFNPQATW----DTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKK
        + F KK
Subjt:  VIFKKK

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]7.81e-2651.4Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDWR++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  ++TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKKK
        V F KKK
Subjt:  VIFKKKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]1.28e-2450.47Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDW ++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  + TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKKK
        V F KKK
Subjt:  VIFKKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein5.50e-2957.27Show/hide
Query:  MSSQNVSRQDWRNLA-QSNQPFNPQATWDTSG--NEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN
        MSSQ V+ QDWRN+  Q NQ F P  T++ S   N+   +M+L GFS+D LRINLNT T  ++V GQKSDG FN+TRLNER+ I EDC L+GV+AK  N+
Subjt:  MSSQNVSRQDWRNLA-QSNQPFNPQATWDTSG--NEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN

Query:  TLTVIFKKKK
        TL V F+K+K
Subjt:  TLTVIFKKKK

A0A2P5BK14 Small heat shock protein HSP2.69e-0731.52Show/hide
Query:  LAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKS-DGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK
        + +S + F P   W        L + L GFS++HLR+ LN +   L ++G++S D   ++R  + I +++DC +D +RAKF    L +   K
Subjt:  LAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKS-DGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK

A0A6J1FGX8 uncharacterized protein LOC1114452976.21e-2550.47Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDW ++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  + TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKKK
        V F KKK
Subjt:  VIFKKKK

A0A6P5FK38 uncharacterized protein LOC1097156171.85e-0635.8Show/hide
Query:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVI
        F P +TW+ +     L + + GF R+HL++ +++S N L V+GQ  DG      + R+P  + C+L G+RAKF ++T T++
Subjt:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVI

W9QEJ7 SHSP domain-containing protein4.09e-0629.89Show/hide
Query:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKS-DGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKKKK
        F P   W        L + L GF R+HLR+ +N   + L ++G++S + + + R  + I +++DC+ D +RAKF +  L +    +K
Subjt:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKS-DGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein2.1e-0431.52Show/hide
Query:  DWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNV-TRLNERIPINEDCSLDGVRAKFLNNTLTV
        D  N  +    F P + W T      LT+ L GF ++ L++ + T+T  L V G +  G N   R  +  PI  +  +D V AKF    L V
Subjt:  DWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNV-TRLNERIPINEDCSLDGVRAKFLNNTLTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGTCAGAACGTGTCACGACAAGATTGGAGAAACTTAGCGCAATCAAACCAACCGTTTAATCCACAAGCAACATGGGATACCAGTGGTAATGAAATACAACTGAC
CATGCAACTTTCAGGGTTTTCAAGGGATCATTTACGAATCAATTTGAACACGAGTACAAATACTCTTATAGTTGCGGGACAAAAATCCGATGGCTTCAATGTCACTCGTT
TGAATGAACGCATACCAATTAATGAAGATTGCTCATTGGATGGAGTCCGTGCAAAATTTCTCAATAACACTCTTACTGTAATATTTAAAAAAAAGAAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGTCAGAACGTGTCACGACAAGATTGGAGAAACTTAGCGCAATCAAACCAACCGTTTAATCCACAAGCAACATGGGATACCAGTGGTAATGAAATACAACTGAC
CATGCAACTTTCAGGGTTTTCAAGGGATCATTTACGAATCAATTTGAACACGAGTACAAATACTCTTATAGTTGCGGGACAAAAATCCGATGGCTTCAATGTCACTCGTT
TGAATGAACGCATACCAATTAATGAAGATTGCTCATTGGATGGAGTCCGTGCAAAATTTCTCAATAACACTCTTACTGTAATATTTAAAAAAAAGAAA
Protein sequenceShow/hide protein sequence
MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKKKK