; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1438 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1438
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRRM domain-containing protein
Genome locationMC04:22326142..22329727
RNA-Seq ExpressionMC04g1438
SyntenyMC04g1438
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]1.21e-13591.47Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QP PKKIKFDE
Subjt:  QPAPKKIKFDE

XP_022134394.1 uncharacterized RNA-binding protein C1827.05c [Momordica charantia]5.65e-150100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDEG
        QPAPKKIKFDEG
Subjt:  QPAPKKIKFDEG

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]7.31e-13792.89Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QP PKKIKFDE
Subjt:  QPAPKKIKFDE

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]6.27e-13892.42Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

XP_023525015.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo]1.21e-13592.42Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+ NKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QP PKKIKFDE
Subjt:  QPAPKKIKFDE

TrEMBL top hitse value%identityAlignment
A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c5.87e-13691.47Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QP PKKIKFDE
Subjt:  QPAPKKIKFDE

A0A6J1BYN0 uncharacterized RNA-binding protein C1827.05c2.74e-150100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDEG
        QPAPKKIKFDEG
Subjt:  QPAPKKIKFDEG

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like3.54e-13792.89Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QP PKKIKFDE
Subjt:  QPAPKKIKFDE

A0A6J1FJK1 uncharacterized RNA-binding protein C1827.05c-like2.79e-13490.05Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+K T  LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGF+Y +KPL+  ELERKQHNKERTL EH+KLV RILKRDQAR+KRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like3.03e-13892.42Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSV

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c3.3e-3041.29Show/hide
Query:  RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ +IEFES +VA +VA++MHNYLLY  +L+  +IP + VH  ++
Subjt:  RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW

Query:  KGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYE
        KG +  +K +    + R QH K  +  +  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein2.0e-2737.5Show/hide
Query:  ATSLLS-EKKESADFLPLVGGPGRKLPAQKPLEN-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH
        A  LLS   +E A F   V    R+   Q+  +  T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG S+ +G++EFES +VAKI A++M+
Subjt:  ATSLLS-EKKESADFLPLVGGPGRKLPAQKPLEN-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH

Query:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        NYL  E +LK H IPPE VH +L++ ++  +K  +   +  K++N+ R+L +  ++ ER  K+++  +KR+   GI+Y  P +V
Subjt:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.8e-2843.36Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG S+ + Y+EFE  EVAKIVAD+M+NYL  E +LK   +PPE VHP+L+ G   +++      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE

Query:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP
        + R  +NK R+ +E +K+ +R+L ++   +KR+   GI+Y+ P
Subjt:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.6e-2739.04Show/hide
Query:  MKKKLNKATSLLS-EKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKI
        M ++L ++  LLS + K   DF   V    RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG S+ + Y+E+E  EVAKI
Subjt:  MKKKLNKATSLLS-EKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKI

Query:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP
        VAD+M+NYL  E +LK   + PE VHP+L+ G N R++      + R  +N +R   E +K+ +R++ ++   +KR+   GI+Y+ P
Subjt:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein2.8e-2944.16Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G++EFE  EVAKIVA++M+NYL+ E I+K H+IPPE VH KL+ G    +K      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE

Query:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSVQPAPK
        + R  +NK  T  + +K+  ++L ++   +KR+ A GI+Y+ P     + PA K
Subjt:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSVQPAPK

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-0631.96Show/hide
Query:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL
        P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I ++S   A+   ++M+   L    LKV L
Subjt:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-0631.96Show/hide
Query:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL
        P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I ++S   A+   ++M+   L    LKV L
Subjt:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL

AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-0637.1Show/hide
Query:  LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHN
        L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG++ F  P VA+IV    HN
Subjt:  LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-0628.18Show/hide
Query:  PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +E+ + +  L+IG I     E+ ++ +FG++G +    I R++ TG++R FG+I F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIPPEH
          +HLI P H
Subjt:  LKVHLIPPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-7462.27Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEK--------KESADFLPLVGGPGRKLP-AQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK + K  +  S          K SADFLPL GGP RK P    PL+N ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLNKATSLLSEK--------KESADFLPLVGGPGRKLP-AQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEY
        +HFG+I+FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF   +KP++  ++ER+Q NKERTL EHRK++++I+K+DQ R+KRI AAGIEY
Subjt:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEY

Query:  ECPEIVGSVQPAPKKIKFDE
        ECPE+VG+ QP PK+IKF E
Subjt:  ECPEIVGSVQPAPKKIKFDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGG
CCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGT
TTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGAT
TCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTT
AAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTTGATGAAGGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAACAACCTGACAACCCAACCCCGGGTTGGTCATTAAATTCGGATCTCTCAACTCTGAATTTTTGGTTGGCCTGAGAAACCTGACCTAATCCAACCCAATCCATGAA
AAAAAAAAAAAAAAACCAACCCGATTTCTAAATAGATCTCCAGCCCTTGGGCCATCCCAGCCCAGGCTTCTTAATTACACGAATATTTATTTAAAGAAAAAAAAAGATAC
TGAACAAGGGCATTTGTGGAAAAGTCCAACCTCTCGAAACGAAACGCTGCGTTTAATCTTTAGGGAAATCGAAAATCCCAATTCCTCGACCTTCTCTTCTCTGTGATTCC
GCCGCCTCCAGTTCTCTTGCAGCTCAGTTCTCTCCAAACCCTAATATTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTG
TCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGGCCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCG
CATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGTTTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACT
TTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAA
CATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTTAAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAG
GAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAGCTC
CCAAGAAGATCAAGTTTGATGAAGGTTAGAATGAGCGTTTAGTTCTCAGTAGCTATAATATTATCACACCAGAGGATGAAGACGGAGGACGGGGAAAAGTCACGGGCCAT
TGTGTGTTTCCAGTTTCTTATTGTGAAGCAGGGGCTGTTTCCTACCATCCTTGAATCTCCAAATTTTGATCTTTGGAATGTTTTGTCAAACATACTTTAAATTCTTTAAT
ATGAATTCCCTTCTATATTGAAGCTTTATGCCTCACAATTCTGACTCACAGGGATTGGAAACTGAATAGTAAATTTTGAAGTCGTACCGATGGCGTGCGCCTATCTGGTT
CGACATATCGGATACAAATGTATAGGATCTCATGT
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVAD
SMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG