CuGenDBv2

Gene ID	MC04g1451
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cyclin-dependent protein kinase inhibitor SMR1
Genome location	MC04:22440882..22441100
RNA-Seq Expression	MC04g1451
Synteny	MC04g1451
Gene Ontology terms	GO:0032875 - regulation of DNA endoreduplication (biological process) GO:0045839 - negative regulation of mitotic nuclear division (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR040389 - Cyclin-dependent protein kinase inhibitor SMR

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011649858.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]

2.51e-42

93.15

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLE+S  AP KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

XP_022133553.1 cyclin-dependent protein kinase inhibitor SMR1 [Momordica charantia]

1.26e-45

100

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]

1.28e-42

91.78

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLEAS+ AP+KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]

6.36e-43

93.15

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLEAS+AAP KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]

1.24e-42

93.15

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEAS+ AP KR+CC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSQ6 Uncharacterized protein

1.22e-42

93.15

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLE+S  AP KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like

1.73e-42

91.78

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLE+S+ AP KR+CC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

A0A6J1BZG0 cyclin-dependent protein kinase inhibitor SMR1

6.10e-46

100

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like

6.21e-43

91.78

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLEAS+ AP+KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like

3.08e-43

93.15

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Query:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC
        CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLEAS+AAP KRSCC
Subjt:  CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

SwissProt top hits

e value

%identity

Alignment

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR1

7.9e-08

46.51

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Query:  CRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS
        C TPTS EHKIP +V S P  P+KP+ PP             CKRKL   T E+    I+N+EE+D FF S Y+ E ST A  +RS
Subjt:  CRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM

8.8e-07

39.74

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Query:  CRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYDLEASTAAPT
        C TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+   +++  T
Subjt:  CRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYDLEASTAAPT

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR2

5.3e-04

41.82

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Query:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

Arabidopsis top hits

e value

%identity

Alignment

AT1G08180.1 unknown protein

3.8e-05

41.82

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Query:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS

5.6e-09

46.51

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Query:  CRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS
        C TPTS EHKIP +V S P  P+KP+ PP             CKRKL   T E+    I+N+EE+D FF S Y+ E ST A  +RS
Subjt:  CRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS

AT5G04470.1 cyclin-dependent protein kinase inhibitors

6.2e-08

39.74

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Query:  CRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYDLEASTAAPT
        C TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+   +++  T
Subjt:  CRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYDLEASTAAPT

Sequences

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CDS sequence

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TGCCGGACGCCGACCTCGGCCGAGCACAAGATTCCGAAGATCGTCAGCTGTCCTGGAGCGCCGAAGAAGCCGAAGAGGCCGCCGGTGCCCTGCAAGAGGAAGTTGACCAT
GGAGCTCAAGTTCTTCGAGATCGTTAACCAAGAAGAGGTCGACAACTTCTTCCGATCCGCTTACGATCTCGAAGCTTCCACGGCGGCGCCGACAAAGAGGAGCTGCTGC

mRNA sequence

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Protein sequence

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CRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRSCC

MC04g1451 (gene) of Bitter gourd (Dali-11) v1 genome