CuGenDBv2

Gene ID	MC04g1528
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L35
Genome location	MC04:23068103..23069551
RNA-Seq Expression	MC04g1528
Synteny	MC04g1528
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001854 - Ribosomal protein L29/L35 IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149815.1 60S ribosomal protein L35 [Cucumis sativus]

1.42e-69

97.54

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMYFPLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]

6.03e-71

99.18

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMYFPLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]

1.42e-69

96.72

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

XP_022941613.1 60S ribosomal protein L35-like [Cucurbita moschata]

2.02e-69

97.54

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SL TERQKKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

XP_038891782.1 60S ribosomal protein L35-like [Benincasa hispida]

2.02e-69

96.72

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSK DLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQT2 Uncharacterized protein

6.88e-70

97.54

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMYFPLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

A0A6J1BZV3 60S ribosomal protein L35

2.92e-71

99.18

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMYFPLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

A0A6J1CDN9 60S ribosomal protein L35-2

9.78e-70

97.54

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTERQKKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

A0A6J1FH81 60S ribosomal protein L35

6.88e-70

96.72

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

A0A6J1JVN4 60S ribosomal protein L35

6.88e-70

96.72

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMY+PLRKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

3.1e-50

90.98

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR+KSKADL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Q9LZ41 60S ribosomal protein L35-4

1.2e-49

90.16

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Q9M3D2 60S ribosomal protein L35-3

3.5e-49

89.34

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKK+MYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Q9M5L0 60S ribosomal protein L35

4.8e-51

91.8

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELRQK+KA+LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Q9SF53 60S ribosomal protein L35-1

7.0e-50

90.16

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Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

2.2e-51

90.98

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR+KSKADL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

AT3G09500.1 Ribosomal L29 family protein

4.9e-51

90.16

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

AT3G55170.1 Ribosomal L29 family protein

2.5e-50

89.34

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKK+MYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

AT3G55170.2 Ribosomal L29 family protein

2.5e-50

89.34

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKK+MYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

AT5G02610.1 Ribosomal L29 family protein

8.4e-51

90.16

Show/hide

Query:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        +ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYFPLRKYAIK
        SLKTER+KKKEMYFP+RKYAIK
Subjt:  SLKTERQKKKEMYFPLRKYAIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GTAGCGAGGATCAAGGTTCACGAGTTGAGGCAGAAATCAAAGGCGGATCTGTTGACGCAGCTTAAGGATCTTAAGGCGGAGCTTGCTCTCCTTCGTGTCGCCAAAGTCAC
CGGCGGTGCCCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATCGCTCAGGTCTTGACGGTGATTTCGCAGAAGCAGAAGGCGGCATTGAGAGAAGCGTACA
AGAAGAAGAAACTTTTGCCTCTCGATCTGCGTCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAGGCCTCCTTGAAAACTGAGAGACAGAAGAAGAAA
GAGATGTACTTTCCATTGAGGAAATATGCTATTAAGTTCATTTCCGGAATTGTTGTGGCTTTGGTTTCACCCGCC

mRNA sequence

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Protein sequence

Show/hide protein sequence

VARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKK
EMYFPLRKYAIKFISGIVVALVSPA

MC04g1528 (gene) of Bitter gourd (Dali-11) v1 genome