; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1543 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1543
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationMC04:23264887..23266351
RNA-Seq ExpressionMC04g1543
SyntenyMC04g1543
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134412.1 uncharacterized protein LOC111006672 isoform X1 [Momordica charantia]1.62e-7984.77Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        NAKKREFFAQKGLRTSPGDVAGDNKRMK                       LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

Query:  VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF
        VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF
Subjt:  VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF

XP_022134418.1 transcription factor bHLH112-like isoform X2 [Momordica charantia]4.50e-3877Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        NAKKREFFAQKGLRTSPGDVAGDNKRMK                       LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

XP_022938584.1 transcription factor bHLH112-like isoform X1 [Cucurbita moschata]7.16e-3787.01Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMKLQEP R+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

XP_022993169.1 transcription factor bHLH112-like isoform X1 [Cucurbita maxima]7.16e-3787.01Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMKLQEP R+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

XP_023550777.1 transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo]1.78e-3788.31Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMKLQEPAR+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

TrEMBL top hitse value%identityAlignment
A0A6J1BYP3 uncharacterized protein LOC111006672 isoform X17.84e-8084.77Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        NAKKREFFAQKGLRTSPGDVAGDNKRMK                       LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

Query:  VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF
        VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF
Subjt:  VQFLANSLILCHDLSHCCHILGCSFSFLDYHYTTGMMMNIDGFNKKHMIKF

A0A6J1C1Y0 transcription factor bHLH112-like isoform X22.18e-3877Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        NAKKREFFAQKGLRTSPGDVAGDNKRMK                       LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMK-----------------------LQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

A0A6J1FEH8 transcription factor bHLH112-like isoform X13.47e-3787.01Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMKLQEP R+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

A0A6J1JS15 transcription factor bHLH112-like isoform X24.87e-3484.42Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMK  EP R+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

A0A6J1JZG5 transcription factor bHLH112-like isoform X13.47e-3787.01Show/hide
Query:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        +AKKREFFAQKG++ +P D+AGDNKRMKLQEP R+SQRLSDKITALQKLVSPYGKTDTASVLQEACLYIK VQEHIQ
Subjt:  NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

SwissProt top hitse value%identityAlignment
Q8VZ22 Transcription factor bHLH1031.4e-0753.45Show/hide
Query:  KRMKLQEPAR------KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHI
        KR +L+ P+       + ++L D+ITALQ+LVSP+GKTDTASVL +A  YIK +QE I
Subjt:  KRMKLQEPAR------KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHI

Q9FYJ6 Transcription factor bHLH1115.3e-0763.41Show/hide
Query:  RLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV
        +L DKIT LQ++VSP+GKTDTASVLQEA  YI   QE +++
Subjt:  RLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV

Q9LT67 Transcription factor bHLH1131.8e-0754.39Show/hide
Query:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQVQFLANSLILCHDL
        + +RL ++I ALQ+LVSPYGKTD ASVL EA  YIK +Q+ IQV  L +  ++ H L
Subjt:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQVQFLANSLILCHDL

Q9M0X8 Transcription factor bHLH1146.2e-0863.64Show/hide
Query:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV
        + ++L D+ITALQ+LVSP+GKTDTASVL EA  YIK +QE + V
Subjt:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV

Q9SFZ3 Transcription factor bHLH1109.0e-0749.23Show/hide
Query:  AGDNKRMKLQEPARKS--------QRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ
        AG+N   K +  +R S        ++L D+I ALQ+LVSP+GKTDTASVL EA  YIK +Q  I+
Subjt:  AGDNKRMKLQEPARKS--------QRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQ

Arabidopsis top hitse value%identityAlignment
AT1G31050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-0863.41Show/hide
Query:  RLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV
        +L DKIT LQ++VSP+GKTDTASVLQEA  YI   QE +++
Subjt:  RLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV

AT1G49830.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-0851.79Show/hide
Query:  DNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV
        D K+  L     K +++ +KIT LQ LVSPYGKTD ASVL E   YIK +Q+ +QV
Subjt:  DNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV

AT3G19500.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-0854.39Show/hide
Query:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQVQFLANSLILCHDL
        + +RL ++I ALQ+LVSPYGKTD ASVL EA  YIK +Q+ IQV  L +  ++ H L
Subjt:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQVQFLANSLILCHDL

AT4G05170.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.4e-0963.64Show/hide
Query:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV
        + ++L D+ITALQ+LVSP+GKTDTASVL EA  YIK +QE + V
Subjt:  KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQV

AT4G21340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.9e-0953.45Show/hide
Query:  KRMKLQEPAR------KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHI
        KR +L+ P+       + ++L D+ITALQ+LVSP+GKTDTASVL +A  YIK +QE I
Subjt:  KRMKLQEPAR------KSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGCAAAGAAACGTGAGTTCTTTGCCCAGAAAGGCCTACGAACTTCCCCAGGTGATGTGGCAGGGGATAACAAGAGAATGAAGTTGCAGGAACCAGCAAGGAAAAGCCA
AAGGCTTAGCGACAAAATTACTGCCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACTGCATCTGTTCTTCAAGAAGCCTGTCTTTATATCAAGCTCGTTCAAG
AACATATCCAGGTACAATTCTTGGCAAATTCTCTCATTTTATGCCATGATCTTTCCCATTGTTGCCATATTTTGGGTTGTTCCTTCTCTTTTTTGGATTATCATTATACT
ACAGGAATGATGATGAACATTGATGGATTCAACAAGAAACATATGATAAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
AATGCAAAGAAACGTGAGTTCTTTGCCCAGAAAGGCCTACGAACTTCCCCAGGTGATGTGGCAGGGGATAACAAGAGAATGAAGTTGCAGGAACCAGCAAGGAAAAGCCA
AAGGCTTAGCGACAAAATTACTGCCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACTGCATCTGTTCTTCAAGAAGCCTGTCTTTATATCAAGCTCGTTCAAG
AACATATCCAGGTACAATTCTTGGCAAATTCTCTCATTTTATGCCATGATCTTTCCCATTGTTGCCATATTTTGGGTTGTTCCTTCTCTTTTTTGGATTATCATTATACT
ACAGGAATGATGATGAACATTGATGGATTCAACAAGAAACATATGATAAAATTTTGAAGTTTATTGCTTAAATATTCTTGTTTGTTAAATATGGTGGTTTGAAGCTTGAA
ATATGTAAACTTTTTTTCTGGGTTTGGAGCAGAATCTACTTCAGTTGCAGAGTTGCTCATATAAAAGCCTCAAGGGAATTCGACAGAAGGAAGAAGGTCTAAGAAGTGAA
GGATTATGTTTGGTTCCTGTGACTTTTACTCAGAAAATACCCATTTGATTTTACACACCCTCATATTGATTTACTTTTTTCTCTCTCTGGAGAGGGGGTTGGGGGGCATT
TCTAGTAAATTTGGTGTCCTGAGTTGTGAATTCGGTATGACTATGAATATGACGCATCAAAACGACTTGTCGGTTCACCAACCTCGTCTTGTGGGCTAGTTTTCAATGAA
ATTATAAATGATTCTGCGCGTAGGGTTCAATTCAAATAAGATACCAATTTTGTCCCAAGTTTAACGGTTTGTGGGTTGCGTCTTGAATGGAATAATTGCAGAGAAAGGGT
TATAGAAATAGATATTTGAGGAATAGGATCTGTGAACAAG
Protein sequenceShow/hide protein sequence
NAKKREFFAQKGLRTSPGDVAGDNKRMKLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQVQFLANSLILCHDLSHCCHILGCSFSFLDYHYT
TGMMMNIDGFNKKHMIKF