CuGenDBv2

Gene ID	MC04g1604
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	tRNA pseudouridine synthase B
Genome location	MC04:23609377..23614447
RNA-Seq Expression	MC04g1604
Synteny	MC04g1604
Gene Ontology terms	GO:0006400 - tRNA modification (biological process) GO:1990481 - mRNA pseudouridine synthesis (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domains	IPR002501 - Pseudouridine synthase II, N-terminal IPR014780 - tRNA pseudouridine synthase II, TruB IPR020103 - Pseudouridine synthase, catalytic domain superfamily IPR032819 - tRNA pseudouridylate synthase B, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578676.1 hypothetical protein SDJN03_23124, partial [Cucurbita argyrosperma subsp. sororia]

0.0

85.27

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI++RP YPP PP NRR PA     +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRRKRMYGSDSDE+K+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TKVE TNGVD+ GL+FFD  R +KDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I Q  PYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_022134332.1 uncharacterized protein LOC111006617 [Momordica charantia]

0.0

99.62

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSS
        MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRR PAAADSPELKPSEDPSS
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSS

Query:  ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL
        ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL
Subjt:  ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL

Query:  EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT
        EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT
Subjt:  EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT

Query:  RHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR
        RHTELPVKWDSPCGTV LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR
Subjt:  RHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR

Query:  EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA
        EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA
Subjt:  EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA

Query:  HLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        HLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  HLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_022938741.1 uncharacterized protein LOC111444875 [Cucurbita moschata]

0.0

85.45

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI++RP YPP PP NRR PA     +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRRKRMYGSDSDE+K+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TKVE TNGVD+ GL+FFD  R EKDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I Q  PYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_022993331.1 uncharacterized protein LOC111489372 [Cucurbita maxima]

0.0

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI+N P YPP PP NRR P   ++ +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRR+RMYGSDSDEDK+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TKVE TNGVD+ GL+FFD  R EKDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I QTEPYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGKVLGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_023550635.1 uncharacterized protein LOC111808717 [Cucurbita pepo subsp. pepo]

0.0

85.64

Show/hide

Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI+NRP YPP PP NRR P   +  +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDK+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLE+KYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TK+E TNGVD  GL+FFD  R EKDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I QTEPYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KP03 Uncharacterized protein

0.0

83.12

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRIT--SSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPS
        MAKSPAL HASHFFIRSTLM SSKSL+L +P SN+ HLHR    +S S LS R FSTT T +PLQYE+I+NRPSYP PP  N R PA     +SPEL  S
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRIT--SSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPS

Query:  EDPSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDP+SELGF+SWVD+KLISE   VSGKEGVVMDKA RKYYNKRRKRMYGSDSDED R + EGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKD
        M+YQLEKKYFPD  LDKAFLGPGESNVEV +Q   R+G++KA  V+    VE  NG+DD  ++FFDE + EK+NK    DV+EKKVEEFFKCLKK PAKD
Subjt:  MVYQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKD

Query:  SEIIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S I Q EPYLLTRH ELP KWDSPCGTV LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
Subjt:  SEIIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A1S3C8B0 uncharacterized protein LOC103498118

0.0

83.67

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Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRIT--SSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADS---PELKPS
        MAKSPAL HASHFFIRSTLM SSKSL L +P SN+ H HR    +S S LS RRF T STP+PLQYE+I+NRPSYP PP  N R PA   S   PEL  S
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRIT--SSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADS---PELKPS

Query:  EDPSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDPSSELGF+SWVD+KLISES  VSGKEGVVMDKA RKYYNKRRKRMYGSDSDED R ++EGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKD
        M+YQLEKKYFPD  LDKAFLGPGESNVEV +Q   R+G+KKAV V+  T VE  NG+DD G++FFDE + EK+NK    DV EKKVEEFFKCLKK PAKD
Subjt:  MVYQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKD

Query:  SEIIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S+I Q EPYLLTRH ELP +WDSPCGTV LLNKPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEAT
Subjt:  SEIIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQ+LADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A6J1BZC1 uncharacterized protein LOC111006617

0.0

99.62

Show/hide

Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSS
        MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRR PAAADSPELKPSEDPSS
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSS

Query:  ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL
        ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL
Subjt:  ELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQL

Query:  EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT
        EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT
Subjt:  EKKYFPDQCLDKAFLGPGESNVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLT

Query:  RHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR
        RHTELPVKWDSPCGTV LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR
Subjt:  RHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQR

Query:  EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA
        EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA
Subjt:  EPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCA

Query:  HLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        HLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  HLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A6J1FDZ7 uncharacterized protein LOC111444875

0.0

85.45

Show/hide

Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI++RP YPP PP NRR PA     +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAA---DSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRRKRMYGSDSDE+K+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TKVE TNGVD+ GL+FFD  R EKDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I Q  PYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A6J1JSH8 uncharacterized protein LOC111489372

0.0

Show/hide

Query:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED
        MA SPAL HASHFFIRSTLMASSKSL    P SN+ HLHR  +S S LS RR STTSTP+PLQY+MI+N P YPP PP NRR P   ++ +SPEL+ SED
Subjt:  MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGP---AAADSPELKPSED

Query:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        P SELGFESWVDQKLISESE+ SGKEGVVMDKAKRKYYNKRR+RMYGSDSDEDK+ ++EGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PSSELGFESWVDQKLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPD+ LDKAFLGPGESNVEV +Q   RKG++KAV V+  TKVE TNGVD+ GL+FFD  R EKDNK    DV EKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDQCLDKAFLGPGESNVEVKQQ---RKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNK----DVAEKKVEEFFKCLKKVPAKDSE

Query:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST
        I QTEPYLLTRHTELP KWDSPCGTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEATST
Subjt:  IIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATST

Query:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
        WDADS VIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSLCA
Subjt:  WDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCA

Query:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        DLGKVLGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  DLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

SwissProt top hits

e value

%identity

Alignment

A0JUU8 tRNA pseudouridine synthase B

7.5e-47

43.72

Show/hide

Query:  LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAAS
        +++KP+GWTS  V G++RRL   +KVGHAGTLDPMATG+L++ + KAT+L+    G  K+Y+   RLGE+T T DA+  V+       + +  I+ A A+
Subjt:  LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAAS

Query:  FCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQY
          GEI QVP   SAIKV GE+ Y + R GE ++L+ R ++I +FD+     +R   +      V CS GTYIR+L  DLG+ LG+  HLTALRR  +G Y
Subjt:  FCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQY

Query:  LADDAWEFKELEDAI
          D A   ++L + +
Subjt:  LADDAWEFKELEDAI

A1R520 tRNA pseudouridine synthase B

4.8e-46

45.12

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Query:  LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAAS
        +++KP+GWTS  V G++RRL   +KVGHAGTLDPMATG+L++ + KAT+L+    G  K+Y+   RLGE T T DA+  V +     HI DD +    A+
Subjt:  LLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAAS

Query:  FCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIE--RSLDDRQNLIFRVT--CSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQY
          G I QVP   SAIKV GE+ Y + R GE ++L+ R ++I +FD+     +D  + +   VT  CS GTYIR+L  DLG  LG   HLTALRR  +G Y
Subjt:  FCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIE--RSLDDRQNLIFRVT--CSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQY

Query:  LADDAWEFKELEDAI
          D A   +EL + +
Subjt:  LADDAWEFKELEDAI

Q47RU8 tRNA pseudouridine synthase B

3.7e-46

44.09

Show/hide

Query:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        V +++KP GWTS  V  ++RRL   ++VGHAGTLDPMATG+L+V VGKAT+L+       K Y    RLG++T+T DA+  +++R P +HI +  +    
Subjt:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIE--RSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDS
         +  G I QVPP  SA+KV G++ Y +AR GE++EL  R +++ +F +   R +D           RVTCS GTYIRSL  DLG  LG   HLTALRR  
Subjt:  ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIE--RSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDS

Query:  IGQYLADDAWEFKELEDAIT
        +G Y  + A    EL    T
Subjt:  IGQYLADDAWEFKELEDAIT

Q5L0I5 tRNA pseudouridine synthase B

1.4e-45

43.75

Show/hide

Query:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEH-IKDDDIQKA
        V LLNKPKG TS     K+RRL+ VKK GH GTLDP  +G+L +C+GKAT++ +   G  K+Y G   LG AT+T DAD  +I   P +  I   +I+  
Subjt:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEH-IKDDDIQKA

Query:  AASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLI-------FRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR
          S  GEI Q PPM+SA+KVGG+K+YE AR G  +E   RR++I++ ++   LD+R+          FRVTCSKGTY+R+L   +G+ LG  AH++ L R
Subjt:  AASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLI-------FRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR

Query:  DSIGQYLADDAWEFKELEDAITKG
         + G +  +D   F+++E     G
Subjt:  DSIGQYLADDAWEFKELEDAITKG

Q9RB36 tRNA pseudouridine synthase B

4.0e-48

45.5

Show/hide

Query:  GTVFLLNKPKGWTSFTVCGKLRRLV-------KVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHI
        G V L++KP  W+SF    KL+ L+       K  K+GHAGTLDP+ATGLL++C GK TK +   QG  K Y+G F +G  T ++D ++ + Q  P EHI
Subjt:  GTVFLLNKPKGWTSFTVCGKLRRLV-------KVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHI

Query:  KDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALR
         +  I +    F GEI Q PP+FSAIK  G ++YE AR GESIE+  R+ +I +F+I R       + FRV CSKGTYIRSL  D GK + S +HLT LR
Subjt:  KDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALR

Query:  RDSIGQYLADDAWEFKELEDAI
        R  IG Y   +A +    E+++
Subjt:  RDSIGQYLADDAWEFKELEDAI

Arabidopsis top hits

e value

%identity

Alignment

AT3G57150.1 homologue of NAP57

3.8e-22

34.9

Show/hide

Query:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        V  L+KP   +S  V   ++R+++V+K GH+GTLDP  TG LIVC+ +AT+LV   QG  K Y  V RL  A        P + +          + +A 
Subjt:  VFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR
         S  G ++Q PP+ SA+K        +  R  +I  S     + ++D +R L     ++F V+C  GTYIR++C  LG +LG   H+  LRR
Subjt:  ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR

AT5G14460.1 Pseudouridine synthase family protein

2.0e-188

66.36

Show/hide

Query:  LMASSKSLTLLVP--FSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSSELGFESWVDQKLISES
        LM+SS  +++  P  FS++K    I   + A  F   STTST YPLQY+MI+NRP+      + RR P A +S         S+E  F+SWVD KL  E 
Subjt:  LMASSKSLTLLVP--FSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSSELGFESWVDQKLISES

Query:  E-AVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDED--KRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQLEKKYFPDQCLDKA
        E    G     MDKAKRKYY+KRRKR+YGSDS+++   R  +EGFVELKPEVVEF+ LH+REEEL+FYDTFAYPWEKDKHYKMVYQLEKKY+PDQCLDKA
Subjt:  E-AVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDED--KRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQLEKKYFPDQCLDKA

Query:  FLGPGE--SNVEVKQQRKGMKKAVEVRSGTKVEATN------GVDDNGLIFFDEAREEKDNKD-------VAEKKVEEFFKCLKKVPAKDSEII---QTE
        FL PGE     +   + +G KK V    G + E           DD+ L+FFDE +E+++ K        V EKKVE+FFK L K P +          E
Subjt:  FLGPGE--SNVEVKQQRKGMKKAVEVRSGTKVEATN------GVDDNGLIFFDEAREEKDNKD-------VAEKKVEEFFKCLKKVPAKDSEII---QTE

Query:  PYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADS
        P+L+TR+ ELP +WD P GTV L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATK+VDRYQGMIK YSGVFRLGEATST DADS
Subjt:  PYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADS

Query:  PVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKV
        PVIQRE WEHIKDDDI+KA  SF GEIWQVPPMFSAIKVGGEKMYEKARRGE++ELSPRRISIF+FDIERSLDDRQNLIFRV CSKGTYIRSLCADL K 
Subjt:  PVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKV

Query:  LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        LGSCAHLTALRRDSIG+Y A+DAWEF ELE AITK YF
Subjt:  LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAAGTCACCTGCTCTAATTCACGCCTCGCATTTCTTCATTCGCTCCACACTCATGGCTTCTTCCAAATCTCTCACTCTTCTCGTTCCATTCTCAAACATCAAGCA
TCTTCACAGAATCACCAGTTCATTCTCTGCCTTATCGTTCCGCAGATTTTCGACCACTTCCACCCCATACCCTCTGCAGTACGAAATGATCCTCAACCGGCCGTCCTATC
CTCCACCACCCCCTCATAATCGGCGAGGACCCGCCGCAGCTGACTCTCCGGAGCTCAAGCCCTCCGAAGATCCCAGTTCGGAATTGGGATTCGAGAGCTGGGTGGATCAG
AAACTTATATCCGAGAGTGAAGCTGTGTCCGGTAAGGAAGGCGTGGTCATGGACAAGGCTAAGAGGAAATATTACAACAAAAGAAGGAAGAGGATGTACGGGTCTGATTC
TGATGAAGATAAGAGGCCACGGGAGGAGGGATTTGTGGAATTAAAGCCTGAGGTAGTTGAGTTTAACACATTGCATAAGAGAGAGGAGGAATTGTTCTTCTATGACACTT
TTGCATATCCGTGGGAGAAAGATAAGCATTATAAAATGGTTTATCAGTTGGAGAAAAAATATTTTCCCGATCAATGTCTTGACAAGGCTTTTCTGGGACCTGGAGAATCA
AATGTGGAAGTGAAGCAGCAAAGGAAGGGGATGAAAAAGGCAGTGGAGGTTAGGTCGGGGACGAAAGTGGAGGCCACGAATGGCGTGGATGACAATGGATTGATTTTCTT
TGACGAGGCGAGAGAAGAAAAGGATAACAAAGATGTGGCCGAGAAGAAGGTGGAGGAGTTCTTTAAGTGTTTGAAGAAAGTTCCCGCCAAAGATTCTGAAATTATTCAGA
CGGAGCCATATCTTTTGACGAGGCATACCGAGCTCCCCGTCAAATGGGATAGTCCTTGTGGGACAGTGTTTTTGCTGAACAAACCTAAAGGATGGACTTCATTTACGGTA
TGTGGAAAACTTCGGCGCCTAGTCAAAGTGAAAAAGGTAGGTCATGCAGGTACTCTTGATCCTATGGCCACTGGTCTGTTGATAGTGTGCGTCGGTAAAGCGACTAAGTT
GGTAGACAGATATCAAGGTATGATTAAGAGCTACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGATTCACCGGTAATTCAGCGAGAACCCTGGG
AGCACATCAAAGATGATGACATACAAAAAGCTGCTGCCTCTTTTTGTGGGGAAATTTGGCAAGTTCCTCCCATGTTTTCCGCCATTAAAGTCGGAGGTGAGAAGATGTAT
GAGAAAGCAAGAAGGGGAGAAAGTATTGAGCTTTCACCAAGACGGATCTCAATTTTCAAATTCGATATTGAACGTAGTTTAGATGACCGGCAAAATTTGATTTTCCGAGT
AACTTGCTCTAAAGGAACATACATTCGATCACTTTGTGCAGATCTTGGGAAGGTTCTTGGCAGTTGTGCTCATCTAACTGCTCTCCGAAGGGATTCAATAGGGCAATATT
TAGCAGATGATGCCTGGGAATTCAAGGAGTTGGAAGATGCAATTACCAAAGGTTATTTTTAG

mRNA sequence

Show/hide mRNA sequence

GGCGAAGTCACCTGCTCTAAACAGCTACAATGGCGAAGTCACCTGCTCTAATTCACGCCTCGCATTTCTTCATTCGCTCCACACTCATGGCTTCTTCCAAATCTCTCACT
CTTCTCGTTCCATTCTCAAACATCAAGCATCTTCACAGAATCACCAGTTCATTCTCTGCCTTATCGTTCCGCAGATTTTCGACCACTTCCACCCCATACCCTCTGCAGTA
CGAAATGATCCTCAACCGGCCGTCCTATCCTCCACCACCCCCTCATAATCGGCGAGGACCCGCCGCAGCTGACTCTCCGGAGCTCAAGCCCTCCGAAGATCCCAGTTCGG
AATTGGGATTCGAGAGCTGGGTGGATCAGAAACTTATATCCGAGAGTGAAGCTGTGTCCGGTAAGGAAGGCGTGGTCATGGACAAGGCTAAGAGGAAATATTACAACAAA
AGAAGGAAGAGGATGTACGGGTCTGATTCTGATGAAGATAAGAGGCCACGGGAGGAGGGATTTGTGGAATTAAAGCCTGAGGTAGTTGAGTTTAACACATTGCATAAGAG
AGAGGAGGAATTGTTCTTCTATGACACTTTTGCATATCCGTGGGAGAAAGATAAGCATTATAAAATGGTTTATCAGTTGGAGAAAAAATATTTTCCCGATCAATGTCTTG
ACAAGGCTTTTCTGGGACCTGGAGAATCAAATGTGGAAGTGAAGCAGCAAAGGAAGGGGATGAAAAAGGCAGTGGAGGTTAGGTCGGGGACGAAAGTGGAGGCCACGAAT
GGCGTGGATGACAATGGATTGATTTTCTTTGACGAGGCGAGAGAAGAAAAGGATAACAAAGATGTGGCCGAGAAGAAGGTGGAGGAGTTCTTTAAGTGTTTGAAGAAAGT
TCCCGCCAAAGATTCTGAAATTATTCAGACGGAGCCATATCTTTTGACGAGGCATACCGAGCTCCCCGTCAAATGGGATAGTCCTTGTGGGACAGTGTTTTTGCTGAACA
AACCTAAAGGATGGACTTCATTTACGGTATGTGGAAAACTTCGGCGCCTAGTCAAAGTGAAAAAGGTAGGTCATGCAGGTACTCTTGATCCTATGGCCACTGGTCTGTTG
ATAGTGTGCGTCGGTAAAGCGACTAAGTTGGTAGACAGATATCAAGGTATGATTAAGAGCTACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGA
TTCACCGGTAATTCAGCGAGAACCCTGGGAGCACATCAAAGATGATGACATACAAAAAGCTGCTGCCTCTTTTTGTGGGGAAATTTGGCAAGTTCCTCCCATGTTTTCCG
CCATTAAAGTCGGAGGTGAGAAGATGTATGAGAAAGCAAGAAGGGGAGAAAGTATTGAGCTTTCACCAAGACGGATCTCAATTTTCAAATTCGATATTGAACGTAGTTTA
GATGACCGGCAAAATTTGATTTTCCGAGTAACTTGCTCTAAAGGAACATACATTCGATCACTTTGTGCAGATCTTGGGAAGGTTCTTGGCAGTTGTGCTCATCTAACTGC
TCTCCGAAGGGATTCAATAGGGCAATATTTAGCAGATGATGCCTGGGAATTCAAGGAGTTGGAAGATGCAATTACCAAAGGTTATTTTTAGCTCAACGAACCCAACATTC
GGCAGCAATTGTAAGTTGAGGGTCGATATGACACTTATCATCTGGCTTTTGCACCACCATCTTCAGATCAAATGAAAGGACAAGATGAGCAGTCTTTTGGTATGTATTTA
AGGGGAAAGAGTTGTGTTGGGCATAGAAAAAATAACGAGGTAATTTTATACCGTTGTGTTTTTAAAAGAATGAATTTTTTTTTTATAATTTACAAAATAGTAAATCTTTT
TGTCACTTTAGTACGTTCAGATGAGGATGCTTAGGTTATGGTAATGTTATACATTCATTGTAAATTTAATACTTGATTTTTTAGTAGGAAGTATGGACGAGTTTTGGAAT
TAATGGAGGTTTGTAGATGTGAAAGCCTATTTCATTGTTGAAATAATTATGAACTACAGTTCACATAATGATATTGATGGGAACATGTTCA

Protein sequence

Show/hide protein sequence

MAKSPALIHASHFFIRSTLMASSKSLTLLVPFSNIKHLHRITSSFSALSFRRFSTTSTPYPLQYEMILNRPSYPPPPPHNRRGPAAADSPELKPSEDPSSELGFESWVDQ
KLISESEAVSGKEGVVMDKAKRKYYNKRRKRMYGSDSDEDKRPREEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLGPGES
NVEVKQQRKGMKKAVEVRSGTKVEATNGVDDNGLIFFDEAREEKDNKDVAEKKVEEFFKCLKKVPAKDSEIIQTEPYLLTRHTELPVKWDSPCGTVFLLNKPKGWTSFTV
CGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGEKMY
EKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

MC04g1604 (gene) of Bitter gourd (Dali-11) v1 genome