; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1635 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1635
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein
Genome locationMC04:23794076..23794537
RNA-Seq ExpressionMC04g1635
SyntenyMC04g1635
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458773.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]2.39e-7980.65Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA
        SP+R TRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWMVGRR LQ ARKK K + L RRRGE DG  AA TGG   
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        N ++ +PEISP  G E   TGN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

XP_011655414.1 uncharacterized protein LOC105435525 [Cucumis sativus]2.28e-7778.71Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLR-RRGEVDGGPAANTGGTPA
        SP++ TRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWMVGRR LQ ARKK K + L  RRGE DG  AA TGG   
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLR-RRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        N ++ +PE+SP  G E   TGN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

XP_022134219.1 uncharacterized protein LOC111006530 [Momordica charantia]7.70e-108100Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
        SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN

Query:  RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
Subjt:  RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

XP_023536558.1 uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo]6.17e-7373.72Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
        SP+ PTRRRRF VDDG DLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWM+GRR LQ ARKK K+  +RR+ E DG  AA+  G    
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN

Query:  RDEKMPEISPAFGGEQAE---TGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSS
        R+E++PEI P  G E+ E    GN SARFEAERIWLQLYQ+GQLGFGRVSFTGNS+
Subjt:  RDEKMPEISPAFGGEQAE---TGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSS

XP_038891069.1 uncharacterized protein LOC120080480 [Benincasa hispida]1.44e-8080.65Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA
        SP+RPTRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALAL+KLPWMVGRR LQ ARKK K + L RRRGE DG  AA TGG  A
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        + +E +PEISP  G E+   GN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

TrEMBL top hitse value%identityAlignment
A0A0A0KR58 Uncharacterized protein1.83e-7678.71Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLR-RRGEVDGGPAANTGGTPA
        SP++ TRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWMVGRR LQ ARKK K + L  RRGE DG  AA TGG   
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLR-RRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        N ++ +PE+SP  G E   TGN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

A0A1S3C8M3 uncharacterized protein LOC1034980781.16e-7980.65Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA
        SP+R TRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWMVGRR LQ ARKK K + L RRRGE DG  AA TGG   
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        N ++ +PEISP  G E   TGN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

A0A5A7T2E5 Uncharacterized protein1.16e-7980.65Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA
        SP+R TRRRRFAVDDGADLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWMVGRR LQ ARKK K + L RRRGE DG  AA TGG   
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSL-RRRGEVDGGPAANTGGTPA

Query:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        N ++ +PEISP  G E   TGN SARFEAERIWLQLYQVGQLGFGRVSFTGNS+L
Subjt:  NRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

A0A6J1BXL5 uncharacterized protein LOC1110065303.73e-108100Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
        SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN

Query:  RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
        RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL
Subjt:  RDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL

A0A6J1JH40 uncharacterized protein LOC1114869582.85e-7070.37Show/hide
Query:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN
        SP+ PTRRRRF VDDG DLIDCSGKHCRSCTAGL+ADCVAVCCCPCSVVSFLALALVKLPWM+GRR LQ ARKK K+  +RR+ E DG  AA+  G    
Subjt:  SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPAN

Query:  RDEKMPEISPAFGGEQAE---------TGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSS
        R+E +PEI P    E+ E          GN SARFEAERIWLQLYQ+GQLGFGRVSFTGNS+
Subjt:  RDEKMPEISPAFGGEQAE---------TGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01516.1 unknown protein1.2e-2444.08Show/hide
Query:  CSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTL-QHARKKWKMKSL------------RRRGEVDGGPAANTGGTPANRDEK--MP
        CSGK CRS  A  IADCVA+CCCPC+VV+   LA VK+PWM+GR+ + +    K +MK +            RR  E+  G     G      D+   + 
Subjt:  CSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTL-QHARKKWKMKSL------------RRRGEVDGGPAANTGGTPANRDEK--MP

Query:  EISPAFGGEQAETGNL--------SARFEAERIWLQLYQVGQLGFGRVSFTG
        E   +   E+A+T +L        SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  EISPAFGGEQAETGNL--------SARFEAERIWLQLYQVGQLGFGRVSFTG

AT3G11690.1 unknown protein8.0e-0533.73Show/hide
Query:  SPARPTRRR---RFAVDDGADLIDCSGKHCRSCTAGLIADCVAV-CCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKS
        SP+R  RR+   + ++   +    C G        G  A C AV CCCPC +V+ L LA+ K+P  + RR ++  R+K  +K+
Subjt:  SPARPTRRR---RFAVDDGADLIDCSGKHCRSCTAGLIADCVAV-CCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKS

AT5G14690.1 unknown protein2.8e-2637.23Show/hide
Query:  RRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTL----QHARKKWKMKSLRRRGEVDG--------------
        RRRR       D + CS K CRS  A  IADCVA+CCCPC++++ L L LVK+PWM+GRR L    ++ +K+  +   +RRG ++G              
Subjt:  RRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTL----QHARKKWKMKSLRRRGEVDG--------------

Query:  -----GPAANTGG---------------------TPANRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTG
             G     GG                         ++E+  E + +  GE  +   +SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  -----GPAANTGG---------------------TPANRDEKMPEISPAFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGCCGGCGAGACCCACGCGGCGGCGCAGATTCGCCGTGGACGACGGCGCCGATCTAATCGACTGCTCCGGCAAGCATTGCCGGTCGTGCACCGCCGGCTTGATCGCCGA
CTGCGTCGCCGTCTGCTGCTGCCCCTGCTCTGTGGTCAGCTTCCTGGCTCTGGCCCTGGTCAAACTGCCGTGGATGGTCGGCCGGAGGACCCTGCAGCACGCCAGGAAGA
AGTGGAAGATGAAATCCCTCCGCCGGAGAGGGGAAGTCGACGGCGGCCCTGCGGCAAACACAGGTGGCACTCCGGCGAACAGGGATGAAAAAATGCCGGAAATTTCGCCG
GCGTTCGGCGGCGAACAAGCAGAGACAGGGAATTTGAGTGCGAGATTTGAAGCAGAGAGAATATGGTTGCAATTGTATCAGGTTGGTCAATTGGGTTTTGGAAGAGTTTC
CTTCACTGGGAATTCAAGTCTC
mRNA sequenceShow/hide mRNA sequence
TCGCCGGCGAGACCCACGCGGCGGCGCAGATTCGCCGTGGACGACGGCGCCGATCTAATCGACTGCTCCGGCAAGCATTGCCGGTCGTGCACCGCCGGCTTGATCGCCGA
CTGCGTCGCCGTCTGCTGCTGCCCCTGCTCTGTGGTCAGCTTCCTGGCTCTGGCCCTGGTCAAACTGCCGTGGATGGTCGGCCGGAGGACCCTGCAGCACGCCAGGAAGA
AGTGGAAGATGAAATCCCTCCGCCGGAGAGGGGAAGTCGACGGCGGCCCTGCGGCAAACACAGGTGGCACTCCGGCGAACAGGGATGAAAAAATGCCGGAAATTTCGCCG
GCGTTCGGCGGCGAACAAGCAGAGACAGGGAATTTGAGTGCGAGATTTGAAGCAGAGAGAATATGGTTGCAATTGTATCAGGTTGGTCAATTGGGTTTTGGAAGAGTTTC
CTTCACTGGGAATTCAAGTCTC
Protein sequenceShow/hide protein sequence
SPARPTRRRRFAVDDGADLIDCSGKHCRSCTAGLIADCVAVCCCPCSVVSFLALALVKLPWMVGRRTLQHARKKWKMKSLRRRGEVDGGPAANTGGTPANRDEKMPEISP
AFGGEQAETGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNSSL