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MC04g1660 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1660
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationMC04:24001624..24003505
RNA-Seq ExpressionMC04g1660
SyntenyMC04g1660
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134322.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Momordica charantia]1.32e-93100Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

XP_022923802.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]1.60e-8593.08Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SS  RS   HVVRAQGEPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]1.60e-8593.08Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SS  RS   HVVRAQGEPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

XP_023511536.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo]1.32e-8492.31Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NI +PLS SS  RS   HVVRAQGEPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

XP_038891226.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispida]5.36e-8491.54Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS S LR S  RHVVRAQ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

TrEMBL top hitse value%identityAlignment
A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic5.24e-8491.54Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SSL  S  RHVVRAQ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic5.24e-8491.54Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SSL  S  RHVVRAQ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

A0A6J1BYG9 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.39e-94100Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

A0A6J1E756 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.75e-8693.08Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SS  RS   HVVRAQGEPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

A0A6J1JLC1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.75e-8693.08Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASS NIA+PLS SS  RS   HVVRAQGEPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.5e-6083.08Show/hide
Query:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        M  QAS+  +A+P  A+  RR     VVRAQ EPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTP+NDFAGN+Q
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.4e-5280.33Show/hide
Query:  PLSASSLRRSPRRHVVRAQG----EPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR
        PLS ++ R  PRR  VRAQ       +DKSVE+MRKFSEQYARRS T+FC DK VTAVVIKGLADH+DTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR
Subjt:  PLSASSLRRSPRRHVVRAQG----EPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR

Query:  ERKECHCMLFLTPENDFAGNDQ
        ERKECHCMLFLTP+NDFAG DQ
Subjt:  ERKECHCMLFLTPENDFAGNDQ

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.2e-5373.85Show/hide
Query:  LQASSCNIALPLSASSLRRSPRR--HVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        ++A   +IA     SS   SPRR   V+RAQ +PSDKS+E+MRKFSEQ+ R+S TYFCVDK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFW
Subjt:  LQASSCNIALPLSASSLRRSPRR--HVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ
        NCPCVPMRERKECHCMLFLTP+NDFAG +Q
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQ

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic8.5e-5376.34Show/hide
Query:  LQAS-SCNIALPLSASSLRRSPRRH--VVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGF
        LQAS S +     S+++L+R   R   V+ ++ EPSDKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDKAAE  QGF
Subjt:  LQAS-SCNIALPLSASSLRRSPRRH--VVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGF

Query:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQ
        WNCPCVPMRERKECHCMLFLTPENDFAG DQ
Subjt:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQ

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.6e-5678.95Show/hide
Query:  MILQASSCN---IALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQ
        M LQA SC+   ++ PL  +  R S RR V+RA+ EPS+KSVEIMRKFSEQYARRSGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDKAAEV Q
Subjt:  MILQASSCN---IALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQ

Query:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQ
        GFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ
Subjt:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQ

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein1.2e-5778.95Show/hide
Query:  MILQASSCN---IALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQ
        M LQA SC+   ++ PL  +  R S RR V+RA+ EPS+KSVEIMRKFSEQYARRSGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDKAAEV Q
Subjt:  MILQASSCN---IALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQ

Query:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQ
        GFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ
Subjt:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTACAAGCTTCGTCGTGCAATATCGCCCTTCCACTTTCTGCTTCCTCCCTCCGACGTTCCCCTCGCCGCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAGGTCAGGAACGTATTTCTGTGTAGATAAGGGGGTCACTGCTGTTGTAATCAAGGGACTGGCGGATC
ACAAAGATACATTGGGTGCACCACTTTGTCCCTGTCGGCATTATGATGACAAAGCTGCTGAGGTTGCGCAAGGTTTTTGGAACTGTCCATGTGTTCCAATGAGAGAGAGG
AAAGAGTGTCATTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCCGGCAACGACCAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTACAAGCTTCGTCGTGCAATATCGCCCTTCCACTTTCTGCTTCCTCCCTCCGACGTTCCCCTCGCCGCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAGGTCAGGAACGTATTTCTGTGTAGATAAGGGGGTCACTGCTGTTGTAATCAAGGGACTGGCGGATC
ACAAAGATACATTGGGTGCACCACTTTGTCCCTGTCGGCATTATGATGACAAAGCTGCTGAGGTTGCGCAAGGTTTTTGGAACTGTCCATGTGTTCCAATGAGAGAGAGG
AAAGAGTGTCATTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCCGGCAACGACCAG
Protein sequenceShow/hide protein sequence
MILQASSCNIALPLSASSLRRSPRRHVVRAQGEPSDKSVEIMRKFSEQYARRSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRER
KECHCMLFLTPENDFAGNDQ