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MC04g1664 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1664
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmetalloendoproteinase 2-MMP-like
Genome locationMC04:24105514..24105714
RNA-Seq ExpressionMC04g1664
SyntenyMC04g1664
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR021190 - Peptidase M10A
IPR024079 - Metallopeptidase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021980471.1 metalloendoproteinase 2-MMP [Helianthus annuus]3.50e-1963.08Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        N +Q W++GAR N  DV +VA+HEIGHLLGLGHS  + AIMW  I   AVKGL  DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

XP_021980473.1 metalloendoproteinase 2-MMP [Helianthus annuus]3.50e-1963.08Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        N +Q W++GAR N  DV +VA+HEIGHLLGLGHS  + AIMW  I   AVKGL  DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

XP_022133608.1 matrix metalloproteinase-9-like [Momordica charantia]3.84e-2162.69Show/hide
Query:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        ++NV+Q W+VGA+    DV SVA+HEIGHLLGL HS  +EAIMWP I  N VKGL+ DD+AG++ALY
Subjt:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

XP_022133610.1 metalloendoproteinase 1-like [Momordica charantia]1.14e-3794.03Show/hide
Query:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        + NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWP IRPNAVKGLFQD+VAGIKALY
Subjt:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

XP_030973479.1 metalloendoproteinase 2-MMP-like [Quercus lobata]5.04e-1960Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        + ++ W+VGA PN  D+ +VA+HEIGHLLGL HS  E AIMWP IRP   +GL +DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

TrEMBL top hitse value%identityAlignment
A0A251TYA8 Putative peptidase M10A, Metallopeptidase, catalytic domain protein1.69e-1963.08Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        N +Q W++GAR N  DV +VA+HEIGHLLGLGHS  + AIMW  I   AVKGL  DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

A0A251TYU0 Putative peptidase M10A, Metallopeptidase, catalytic domain protein1.69e-1963.08Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        N +Q W++GAR N  DV +VA+HEIGHLLGLGHS  + AIMW  I   AVKGL  DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

A0A6J1BVR3 metalloendoproteinase 1-like5.51e-3894.03Show/hide
Query:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        + NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWP IRPNAVKGLFQD+VAGIKALY
Subjt:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

A0A6J1BZL4 matrix metalloproteinase-9-like1.86e-2162.69Show/hide
Query:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        ++NV+Q W+VGA+    DV SVA+HEIGHLLGL HS  +EAIMWP I  N VKGL+ DD+AG++ALY
Subjt:  NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

A0A7N2LXS1 ZnMc domain-containing protein2.44e-1960Show/hide
Query:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY
        + ++ W+VGA PN  D+ +VA+HEIGHLLGL HS  E AIMWP IRP   +GL +DD+ GIKALY
Subjt:  NVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP2.3e-0962.75Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS  EE+IM+P I     K  L  DDV GI+ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

O23507 Metalloendoproteinase 1-MMP1.2e-1046.58Show/hide
Query:  NINVEQCWTV-----GARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        +++  + W V     G+     D+ SVA HEIGHLLGLGHS  E A+M+P +RP   K  L  DDVAG+  LY
Subjt:  NINVEQCWTV-----GARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

P29136 Metalloendoproteinase 11.3e-0962.75Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS    AIM+P I P   K  L QDD+ GI+ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

Q5XF51 Metalloendoproteinase 3-MMP5.0e-0960.78Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS  E +IM+P IR    K  L  DDV G++ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

Q8GWW6 Metalloendoproteinase 4-MMP1.0e-0954.9Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGH+LGLGHS  ++A M+P ++P + K  L  DDV G+++LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein3.6e-1060.78Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS  E +IM+P IR    K  L  DDV G++ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

AT1G59970.1 Matrixin family protein4.7e-1060.78Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS  E+AIM+P I     K  L +DD+ GI+ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

AT1G70170.1 matrix metalloproteinase1.6e-1062.75Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGHLLGLGHS  EE+IM+P I     K  L  DDV GI+ LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

AT2G45040.1 Matrixin family protein7.2e-1154.9Show/hide
Query:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        D+ SVAVHEIGH+LGLGHS  ++A M+P ++P + K  L  DDV G+++LY
Subjt:  DVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY

AT4G16640.1 Matrixin family protein8.5e-1246.58Show/hide
Query:  NINVEQCWTV-----GARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY
        +++  + W V     G+     D+ SVA HEIGHLLGLGHS  E A+M+P +RP   K  L  DDVAG+  LY
Subjt:  NINVEQCWTV-----GARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVK-GLFQDDVAGIKALY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATATCAACGTGGAGCAGTGCTGGACGGTGGGGGCTCGCCCAAATTGTCAAGATGTGATGTCGGTGGCAGTGCATGAGATTGGGCATCTTCTTGGGCTCGGCCACAGCGG
CGCCGAGGAAGCCATCATGTGGCCATACATACGCCCCAACGCTGTCAAGGGCTTGTTTCAAGACGATGTTGCTGGAATCAAGGCTTTGTAT
mRNA sequenceShow/hide mRNA sequence
AATATCAACGTGGAGCAGTGCTGGACGGTGGGGGCTCGCCCAAATTGTCAAGATGTGATGTCGGTGGCAGTGCATGAGATTGGGCATCTTCTTGGGCTCGGCCACAGCGG
CGCCGAGGAAGCCATCATGTGGCCATACATACGCCCCAACGCTGTCAAGGGCTTGTTTCAAGACGATGTTGCTGGAATCAAGGCTTTGTAT
Protein sequenceShow/hide protein sequence
NINVEQCWTVGARPNCQDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALY